BLASTX nr result

ID: Bupleurum21_contig00019104 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00019104
         (1425 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI14997.3| unnamed protein product [Vitis vinifera]              418   e-114
ref|XP_002278631.1| PREDICTED: uncharacterized protein LOC100251...   418   e-114
ref|XP_002318085.1| predicted protein [Populus trichocarpa] gi|2...   412   e-113
ref|XP_003523088.1| PREDICTED: uncharacterized protein LOC100796...   409   e-112
gb|AFK46605.1| unknown [Medicago truncatula]                          406   e-111

>emb|CBI14997.3| unnamed protein product [Vitis vinifera]
          Length = 356

 Score =  418 bits (1075), Expect = e-114
 Identities = 210/293 (71%), Positives = 245/293 (83%), Gaps = 1/293 (0%)
 Frame = -3

Query: 1420 SSEDVPQHTDVEPDASDQDKDNNLAKDVSSTKSSYVYAEGAVGKPGLISFYSYPYKQEVN 1241
            +SED     +++PD S+Q++ +  A+ + S   +Y ++EG  GKPGLISFY+ PYK+   
Sbjct: 64   TSEDQSPSDELKPDTSEQEEYHPNAEGIPSASITYFHSEGTGGKPGLISFYNRPYKRADE 123

Query: 1240 ILEYRTRSNRNNVLWFVGPAVLVASYVFPSLYLRRILSTVFEDSLLTDFLILFFTEALFY 1061
             L      N+NN+LWF+GP++LVAS++FPSLYLRRILSTVFEDSLLTDFLILFFTEALFY
Sbjct: 124  DLISGPPRNQNNLLWFIGPSILVASFIFPSLYLRRILSTVFEDSLLTDFLILFFTEALFY 183

Query: 1060 CGAAMFLFIVDHLRRPSEQKLTVNN-RNPPPELEYQITSVAVLVLSLVIPMVTMGLVWPW 884
            CG A+FL ++D LRR  E     N+ R P P+L ++I S A LVLSL+IPMVTMGLVWPW
Sbjct: 184  CGVAVFLLLIDRLRRSLEPVSDTNSHRIPAPQLGHRIASGAALVLSLIIPMVTMGLVWPW 243

Query: 883  TGPAASATLAPYLVGIVVQFAFEQYARYVKSPSWPVVPVIFQVYRLHQLNRAAQLVTALS 704
            TGPAASATLAPYLVGIVVQFAFEQYARY+KSPSWPV+PV+FQVYRLHQLNRAAQLVTALS
Sbjct: 244  TGPAASATLAPYLVGIVVQFAFEQYARYIKSPSWPVIPVVFQVYRLHQLNRAAQLVTALS 303

Query: 703  FTVRGAEMTTHNLAINSSLGTLLNVLQCLGVICIWSLSSFLMRFLPSAIITEQ 545
            FTVRGAEMTTHNLAINSSLGTLLNVLQ LGVICIWSLSSFLMRF PSA +T+Q
Sbjct: 304  FTVRGAEMTTHNLAINSSLGTLLNVLQFLGVICIWSLSSFLMRFFPSATMTQQ 356


>ref|XP_002278631.1| PREDICTED: uncharacterized protein LOC100251871 [Vitis vinifera]
          Length = 319

 Score =  418 bits (1075), Expect = e-114
 Identities = 210/293 (71%), Positives = 245/293 (83%), Gaps = 1/293 (0%)
 Frame = -3

Query: 1420 SSEDVPQHTDVEPDASDQDKDNNLAKDVSSTKSSYVYAEGAVGKPGLISFYSYPYKQEVN 1241
            +SED     +++PD S+Q++ +  A+ + S   +Y ++EG  GKPGLISFY+ PYK+   
Sbjct: 27   TSEDQSPSDELKPDTSEQEEYHPNAEGIPSASITYFHSEGTGGKPGLISFYNRPYKRADE 86

Query: 1240 ILEYRTRSNRNNVLWFVGPAVLVASYVFPSLYLRRILSTVFEDSLLTDFLILFFTEALFY 1061
             L      N+NN+LWF+GP++LVAS++FPSLYLRRILSTVFEDSLLTDFLILFFTEALFY
Sbjct: 87   DLISGPPRNQNNLLWFIGPSILVASFIFPSLYLRRILSTVFEDSLLTDFLILFFTEALFY 146

Query: 1060 CGAAMFLFIVDHLRRPSEQKLTVNN-RNPPPELEYQITSVAVLVLSLVIPMVTMGLVWPW 884
            CG A+FL ++D LRR  E     N+ R P P+L ++I S A LVLSL+IPMVTMGLVWPW
Sbjct: 147  CGVAVFLLLIDRLRRSLEPVSDTNSHRIPAPQLGHRIASGAALVLSLIIPMVTMGLVWPW 206

Query: 883  TGPAASATLAPYLVGIVVQFAFEQYARYVKSPSWPVVPVIFQVYRLHQLNRAAQLVTALS 704
            TGPAASATLAPYLVGIVVQFAFEQYARY+KSPSWPV+PV+FQVYRLHQLNRAAQLVTALS
Sbjct: 207  TGPAASATLAPYLVGIVVQFAFEQYARYIKSPSWPVIPVVFQVYRLHQLNRAAQLVTALS 266

Query: 703  FTVRGAEMTTHNLAINSSLGTLLNVLQCLGVICIWSLSSFLMRFLPSAIITEQ 545
            FTVRGAEMTTHNLAINSSLGTLLNVLQ LGVICIWSLSSFLMRF PSA +T+Q
Sbjct: 267  FTVRGAEMTTHNLAINSSLGTLLNVLQFLGVICIWSLSSFLMRFFPSATMTQQ 319


>ref|XP_002318085.1| predicted protein [Populus trichocarpa] gi|222858758|gb|EEE96305.1|
            predicted protein [Populus trichocarpa]
          Length = 329

 Score =  412 bits (1060), Expect = e-113
 Identities = 206/293 (70%), Positives = 245/293 (83%), Gaps = 1/293 (0%)
 Frame = -3

Query: 1420 SSEDVPQHTDVEPDASDQDKDNNLAKDVSSTKSSYVYAEGAVGKPGLISFYSYPYKQEVN 1241
            +S+D  Q+++++PDAS+++ D+  A+ + +T SS  +  G  GKPGLISFY+ PYK    
Sbjct: 37   ASQDQSQYSEIKPDASEEEDDHPTAEALPTTSSSINHFPGTDGKPGLISFYNRPYKMVDE 96

Query: 1240 ILEYRTRSNRNNVLWFVGPAVLVASYVFPSLYLRRILSTVFEDSLLTDFLILFFTEALFY 1061
            ++    + N +++LWF+GPAVLVAS++FPSLYLR+ILS VFEDSLLTDFLILFFTEALFY
Sbjct: 97   VIISNVQRNPSSLLWFIGPAVLVASFIFPSLYLRKILSAVFEDSLLTDFLILFFTEALFY 156

Query: 1060 CGAAMFLFIVDHLRRPSEQKLTVNN-RNPPPELEYQITSVAVLVLSLVIPMVTMGLVWPW 884
            CG A+FL ++DHLRRP E   +VNN R   P L  +I+SVA LVLSL+IPMVTMGLVWPW
Sbjct: 157  CGVAVFLLLIDHLRRPVEPLSSVNNNRTLAPHLGQRISSVAALVLSLIIPMVTMGLVWPW 216

Query: 883  TGPAASATLAPYLVGIVVQFAFEQYARYVKSPSWPVVPVIFQVYRLHQLNRAAQLVTALS 704
            TGPAASATLAPYLVGIVVQFAFEQYARY KSPSWPV+P+IFQVYRLHQLNRAAQLVTALS
Sbjct: 217  TGPAASATLAPYLVGIVVQFAFEQYARYRKSPSWPVIPIIFQVYRLHQLNRAAQLVTALS 276

Query: 703  FTVRGAEMTTHNLAINSSLGTLLNVLQCLGVICIWSLSSFLMRFLPSAIITEQ 545
            FTVRGAEMT+HNL I+SSLGTLLNVLQ LGVICIWSLSSFLM+F P A  T +
Sbjct: 277  FTVRGAEMTSHNLEISSSLGTLLNVLQFLGVICIWSLSSFLMKFFPPAARTAE 329


>ref|XP_003523088.1| PREDICTED: uncharacterized protein LOC100796720 [Glycine max]
          Length = 372

 Score =  409 bits (1051), Expect = e-112
 Identities = 200/292 (68%), Positives = 244/292 (83%), Gaps = 1/292 (0%)
 Frame = -3

Query: 1417 SEDVPQHTDVEPDASDQDKDNNLAKDVSSTKSSYVYAEGAVGKPGLISFYSYPYKQEVNI 1238
            SED  Q+ ++E  A   +  N +A+D+S   +SY +  G+ GKPGL+SFY+ PY+++  I
Sbjct: 81   SEDQSQYCELETTALVLENSNTVAEDISPASNSYFHLSGSDGKPGLLSFYNRPYRRDSKI 140

Query: 1237 LEYRTRSNRNNVLWFVGPAVLVASYVFPSLYLRRILSTVFEDSLLTDFLILFFTEALFYC 1058
            L   +  ++N++LWF+GPAVLVAS++FPSLYLR++LS +FEDSLLTDFLILFFTEA+FYC
Sbjct: 141  LLPNSERSQNSILWFLGPAVLVASFIFPSLYLRKVLSIIFEDSLLTDFLILFFTEAIFYC 200

Query: 1057 GAAMFLFIVDHLRRPSEQKLTVNNRNP-PPELEYQITSVAVLVLSLVIPMVTMGLVWPWT 881
            G  +FL+++DH+RRP    +  NN +  PP+L  +++SVA LVLSLVIPMVTMGLVWPWT
Sbjct: 201  GVGVFLYLLDHVRRPLLVDIAANNSDTLPPQLGQRVSSVATLVLSLVIPMVTMGLVWPWT 260

Query: 880  GPAASATLAPYLVGIVVQFAFEQYARYVKSPSWPVVPVIFQVYRLHQLNRAAQLVTALSF 701
            GPAASATLAPYLVGIVVQFAFEQYARY KSPSW  +P+IFQVYRLHQLNRAAQLVTALSF
Sbjct: 261  GPAASATLAPYLVGIVVQFAFEQYARYRKSPSWSAIPLIFQVYRLHQLNRAAQLVTALSF 320

Query: 700  TVRGAEMTTHNLAINSSLGTLLNVLQCLGVICIWSLSSFLMRFLPSAIITEQ 545
            TVRGAEMT+HN+AINSSLGTLLNVLQ LGVICIWSLSSFLMRF+P A  T+Q
Sbjct: 321  TVRGAEMTSHNMAINSSLGTLLNVLQFLGVICIWSLSSFLMRFIPYASTTKQ 372


>gb|AFK46605.1| unknown [Medicago truncatula]
          Length = 376

 Score =  406 bits (1043), Expect = e-111
 Identities = 202/287 (70%), Positives = 240/287 (83%), Gaps = 1/287 (0%)
 Frame = -3

Query: 1417 SEDVPQHTDVEPDASDQDKDNNLAKDVSSTKSSYVYAEGAVGKPGLISFYSYPYKQEVNI 1238
            SED  Q+ ++E  A   + +NN+A+D+S   +   +  G+ GKPG ISFY+ PY+++  I
Sbjct: 85   SEDQSQNNELEIPAPVPENNNNIAQDISPASNPSFHLSGSDGKPGFISFYNRPYRRDSEI 144

Query: 1237 LEYRTRSNRNNVLWFVGPAVLVASYVFPSLYLRRILSTVFEDSLLTDFLILFFTEALFYC 1058
            L   +  ++NN+LWFVGPAVLVAS++FPSLYLR++LS +FEDSLLTDFLILFFTEA+FY 
Sbjct: 145  LLLNSERSQNNILWFVGPAVLVASFIFPSLYLRKLLSIIFEDSLLTDFLILFFTEAIFYG 204

Query: 1057 GAAMFLFIVDHLRRPSE-QKLTVNNRNPPPELEYQITSVAVLVLSLVIPMVTMGLVWPWT 881
            G A+FLF++DHLRRP +    T N    PP+L  +I+SVA LVLSLVIPMVTMGLVWPWT
Sbjct: 205  GVAVFLFLLDHLRRPLQLDTATKNTDTLPPQLGQKISSVATLVLSLVIPMVTMGLVWPWT 264

Query: 880  GPAASATLAPYLVGIVVQFAFEQYARYVKSPSWPVVPVIFQVYRLHQLNRAAQLVTALSF 701
            GPAASATLAPYLVGIVVQFAFEQYARY KSPSW  +P+IFQVYRLHQLNRAAQLVTALSF
Sbjct: 265  GPAASATLAPYLVGIVVQFAFEQYARYRKSPSWSAIPLIFQVYRLHQLNRAAQLVTALSF 324

Query: 700  TVRGAEMTTHNLAINSSLGTLLNVLQCLGVICIWSLSSFLMRFLPSA 560
            TVRGAE+T+HN+AINSSLGTLLNVLQ LGVICIWSLSSFLMRF+PSA
Sbjct: 325  TVRGAELTSHNMAINSSLGTLLNVLQFLGVICIWSLSSFLMRFIPSA 371


Top