BLASTX nr result

ID: Bupleurum21_contig00019094 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00019094
         (515 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002870752.1| hypothetical protein ARALYDRAFT_356016 [Arab...   290   8e-77
ref|XP_003633851.1| PREDICTED: ATP-dependent RNA helicase SUPV3L...   288   3e-76
emb|CAN60906.1| hypothetical protein VITISV_028450 [Vitis vinifera]   288   3e-76
ref|NP_198800.1| putative ATP-dependent RNA helicase [Arabidopsi...   286   1e-75
dbj|BAB10208.1| mitochondrial RNA helicase-like protein [Arabido...   286   1e-75

>ref|XP_002870752.1| hypothetical protein ARALYDRAFT_356016 [Arabidopsis lyrata subsp.
           lyrata] gi|297316588|gb|EFH47011.1| hypothetical protein
           ARALYDRAFT_356016 [Arabidopsis lyrata subsp. lyrata]
          Length = 777

 Score =  290 bits (742), Expect = 8e-77
 Identities = 138/157 (87%), Positives = 152/157 (96%)
 Frame = -1

Query: 515 CGDPSVLNIVRKICCETGDELVEQRYERFKPLVVEAKTLLGDLRNVRSGDCIVAFSRREI 336
           CGDPSVL+IVRK+C +TGDELVE+ YERFKPLVVEAKTLLGDL+NV+SGDC+VAFSRREI
Sbjct: 390 CGDPSVLDIVRKMCADTGDELVEEHYERFKPLVVEAKTLLGDLKNVKSGDCVVAFSRREI 449

Query: 335 FEVRLAIEKYTKHRCCVIYGALPPETRRMQANLFNDQDNEYDILVASDAVGMGLNLNIRR 156
           FEV++AIEK+T HRCCVIYGALPPETRR QANLFNDQ+NEYD+LVASDAVGMGLNLNIRR
Sbjct: 450 FEVKMAIEKHTNHRCCVIYGALPPETRRQQANLFNDQENEYDVLVASDAVGMGLNLNIRR 509

Query: 155 VVFYTLSKYNGDKIVPVAASQVKQIAGRAGRRGSHYP 45
           VVFY+L+KYNGDKIVPVAASQVKQIAGRAGRRGS YP
Sbjct: 510 VVFYSLNKYNGDKIVPVAASQVKQIAGRAGRRGSRYP 546


>ref|XP_003633851.1| PREDICTED: ATP-dependent RNA helicase SUPV3L1, mitochondrial-like
           [Vitis vinifera]
          Length = 806

 Score =  288 bits (737), Expect = 3e-76
 Identities = 139/157 (88%), Positives = 149/157 (94%)
 Frame = -1

Query: 515 CGDPSVLNIVRKICCETGDELVEQRYERFKPLVVEAKTLLGDLRNVRSGDCIVAFSRREI 336
           CGDPSVLN+VRKIC ETGDEL EQ YERFKPLVVEAKTLLG+L+NVRSGDC+VAFSRREI
Sbjct: 403 CGDPSVLNVVRKICSETGDELFEQHYERFKPLVVEAKTLLGELQNVRSGDCVVAFSRREI 462

Query: 335 FEVRLAIEKYTKHRCCVIYGALPPETRRMQANLFNDQDNEYDILVASDAVGMGLNLNIRR 156
           FEV+LAIEK+T HRCCVIYGALPPETRR QA+LFND DNEYD+LVASDAVGMGLNLNIRR
Sbjct: 463 FEVKLAIEKHTNHRCCVIYGALPPETRRQQASLFNDPDNEYDVLVASDAVGMGLNLNIRR 522

Query: 155 VVFYTLSKYNGDKIVPVAASQVKQIAGRAGRRGSHYP 45
           VVFY+LSKYNGDKIVPV A+QVKQIAGRAGRRGS YP
Sbjct: 523 VVFYSLSKYNGDKIVPVPATQVKQIAGRAGRRGSRYP 559


>emb|CAN60906.1| hypothetical protein VITISV_028450 [Vitis vinifera]
          Length = 906

 Score =  288 bits (737), Expect = 3e-76
 Identities = 139/157 (88%), Positives = 149/157 (94%)
 Frame = -1

Query: 515 CGDPSVLNIVRKICCETGDELVEQRYERFKPLVVEAKTLLGDLRNVRSGDCIVAFSRREI 336
           CGDPSVLN+VRKIC ETGDEL EQ YERFKPLVVEAKTLLG+L+NVRSGDC+VAFSRREI
Sbjct: 450 CGDPSVLNVVRKICSETGDELFEQHYERFKPLVVEAKTLLGELQNVRSGDCVVAFSRREI 509

Query: 335 FEVRLAIEKYTKHRCCVIYGALPPETRRMQANLFNDQDNEYDILVASDAVGMGLNLNIRR 156
           FEV+LAIEK+T HRCCVIYGALPPETRR QA+LFND DNEYD+LVASDAVGMGLNLNIRR
Sbjct: 510 FEVKLAIEKHTNHRCCVIYGALPPETRRQQASLFNDPDNEYDVLVASDAVGMGLNLNIRR 569

Query: 155 VVFYTLSKYNGDKIVPVAASQVKQIAGRAGRRGSHYP 45
           VVFY+LSKYNGDKIVPV A+QVKQIAGRAGRRGS YP
Sbjct: 570 VVFYSLSKYNGDKIVPVPATQVKQIAGRAGRRGSRYP 606


>ref|NP_198800.1| putative ATP-dependent RNA helicase [Arabidopsis thaliana]
           gi|332007099|gb|AED94482.1| putative ATP-dependent RNA
           helicase [Arabidopsis thaliana]
          Length = 776

 Score =  286 bits (732), Expect = 1e-75
 Identities = 136/157 (86%), Positives = 151/157 (96%)
 Frame = -1

Query: 515 CGDPSVLNIVRKICCETGDELVEQRYERFKPLVVEAKTLLGDLRNVRSGDCIVAFSRREI 336
           CGDPSVL+IVRK+C +TGDELVE+ YERFKPLVVEAKTLLG+L+NV+SGDC+VAFSRREI
Sbjct: 390 CGDPSVLDIVRKMCADTGDELVEEHYERFKPLVVEAKTLLGELKNVKSGDCVVAFSRREI 449

Query: 335 FEVRLAIEKYTKHRCCVIYGALPPETRRMQANLFNDQDNEYDILVASDAVGMGLNLNIRR 156
           FEV++AIEK+T HRCCVIYGALPPETRR QA LFNDQ+NEYD+LVASDAVGMGLNLNIRR
Sbjct: 450 FEVKMAIEKHTNHRCCVIYGALPPETRRQQAKLFNDQENEYDVLVASDAVGMGLNLNIRR 509

Query: 155 VVFYTLSKYNGDKIVPVAASQVKQIAGRAGRRGSHYP 45
           VVFY+L+KYNGDKIVPVAASQVKQIAGRAGRRGS YP
Sbjct: 510 VVFYSLNKYNGDKIVPVAASQVKQIAGRAGRRGSRYP 546


>dbj|BAB10208.1| mitochondrial RNA helicase-like protein [Arabidopsis thaliana]
          Length = 769

 Score =  286 bits (732), Expect = 1e-75
 Identities = 136/157 (86%), Positives = 151/157 (96%)
 Frame = -1

Query: 515 CGDPSVLNIVRKICCETGDELVEQRYERFKPLVVEAKTLLGDLRNVRSGDCIVAFSRREI 336
           CGDPSVL+IVRK+C +TGDELVE+ YERFKPLVVEAKTLLG+L+NV+SGDC+VAFSRREI
Sbjct: 390 CGDPSVLDIVRKMCADTGDELVEEHYERFKPLVVEAKTLLGELKNVKSGDCVVAFSRREI 449

Query: 335 FEVRLAIEKYTKHRCCVIYGALPPETRRMQANLFNDQDNEYDILVASDAVGMGLNLNIRR 156
           FEV++AIEK+T HRCCVIYGALPPETRR QA LFNDQ+NEYD+LVASDAVGMGLNLNIRR
Sbjct: 450 FEVKMAIEKHTNHRCCVIYGALPPETRRQQAKLFNDQENEYDVLVASDAVGMGLNLNIRR 509

Query: 155 VVFYTLSKYNGDKIVPVAASQVKQIAGRAGRRGSHYP 45
           VVFY+L+KYNGDKIVPVAASQVKQIAGRAGRRGS YP
Sbjct: 510 VVFYSLNKYNGDKIVPVAASQVKQIAGRAGRRGSRYP 546


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