BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00019092
         (1240 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268974.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   268   2e-69
ref|XP_003595735.1| Ubiquitin carboxyl-terminal hydrolase [Medic...   256   1e-65
ref|XP_003534373.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   246   9e-63
ref|XP_003539934.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   244   3e-62
ref|XP_002867323.1| ubiquitin-specific protease 24 [Arabidopsis ...   205   2e-50

>ref|XP_002268974.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 24 [Vitis vinifera]
            gi|296081305|emb|CBI17749.3| unnamed protein product
            [Vitis vinifera]
          Length = 553

 Score =  268 bits (685), Expect = 2e-69
 Identities = 177/393 (45%), Positives = 220/393 (55%), Gaps = 25/393 (6%)
 Frame = +3

Query: 135  TQQQVFLFGSFSEDEAKSLLHQSS---IEQAEKNDLPVDASSNVTRLSFGSFDGDLTIKL 305
            +  ++ LFGSF+EDE +SLL   S    + A K +L   +   VT  +  S   +L  + 
Sbjct: 5    SDSKLLLFGSFTEDETRSLLRLPSGNAEKPAAKKELQFGSVDFVTGRALASVGNELCRQA 64

Query: 306  PYSNGTTNSKPLEFRKNNYVKKVDAP-------------GGNSKENGSIQSSLHCSALSN 446
              S G     P++F  +N +KK D                G  KENG +    H S L N
Sbjct: 65   DSSKG-----PIDFCSSNLLKKDDETKSVDGVNKLSSEAAGTPKENGGVHDFTHSSPLGN 119

Query: 447  GNKETKRTCGINLTAN-VSENKVVIPGKLVTLAQHA-DKEVIKEY-VNGTSHEN-----L 602
            G          NL +  +S+NK  +  +  +L  H  ++E  KE  +NGT  ++     L
Sbjct: 120  GVVNELNPDRFNLDSLCLSQNKEHL-NQFQSLESHVVEEECSKERDLNGTIDDSSTFVPL 178

Query: 603  HNHCQEASNGSTKTVEDLCPRGLINSGNLCFLNATLQAXXXXXXXXXXXXEIRNRSISKV 782
                 +A NG    V++L PRGLINSGNLCFLNATLQA            E+R R I KV
Sbjct: 179  KKEILKAPNGPAPAVKNLLPRGLINSGNLCFLNATLQALLSCTPFIQLLQELRIRDIPKV 238

Query: 783  CYPTLGAFVDFVSVLDMPNGITLKMKNIPALETGRPFSPSMFEGVLKKFTPDVSNSFSGR 962
             YPTL AF +FVS  DMP  ++LK K++  +ETGRPFSP+MFEGVLK FTPDV N  SGR
Sbjct: 239  GYPTLTAFAEFVSEFDMPTDLSLKKKDLNGVETGRPFSPAMFEGVLKNFTPDVPNKISGR 298

Query: 963  PRQEDAQEFLSFVXXXXXXXXXXXXXXXXXXXEFLSFVMDQMHDELLKLEGQSSG-NEGE 1139
            PRQEDAQE                         FLSFVMDQMHDELLKLEG  S  N G+
Sbjct: 299  PRQEDAQE-------------------------FLSFVMDQMHDELLKLEGFFSNLNGGK 333

Query: 1140 SYLVSSADDDDWETVGPKNKSAVTRTQNFVPSD 1238
            S LVSSA+DD+WETVGPKNKSAVTRTQ+FVPS+
Sbjct: 334  SSLVSSAEDDEWETVGPKNKSAVTRTQSFVPSE 366


>ref|XP_003595735.1| Ubiquitin carboxyl-terminal hydrolase [Medicago truncatula]
            gi|355484783|gb|AES65986.1| Ubiquitin carboxyl-terminal
            hydrolase [Medicago truncatula]
          Length = 532

 Score =  256 bits (653), Expect = 1e-65
 Identities = 176/384 (45%), Positives = 228/384 (59%), Gaps = 19/384 (4%)
 Frame = +3

Query: 144  QVFLFGSFSEDEAKSLLHQSSIEQAEKNDLPVDASSNVTRLSFGSFDGDLTIK---LPYS 314
            +V LFGSF+EDE +SL  + S   + KN+ PV+ +    +L FGS +  +T++   LP S
Sbjct: 5    KVLLFGSFTEDETRSLRVKKS---SAKNEKPVEKN----QLQFGSLNS-VTVESSNLPNS 56

Query: 315  NGTTNSKPL----EFRKNNYVKKVDAPGGNS--KENGSIQS-SLHCSALSNGNKETKR-T 470
               TNS PL    +F+  N V+ V+ P      KENG I + S+  S++++ N+  +   
Sbjct: 57   PKATNSAPLHDSQKFKGVNGVR-VNLPQVTETIKENGGITNFSIGPSSITSANEVKEHIV 115

Query: 471  CGI-----NLTANVSENKVVIPGKLVTLAQHADKEVIKEYVNGTSHENL-HNHCQEASNG 632
            C +     N TAN   N  +   +  +L     K V+K    G S   L   + ++A NG
Sbjct: 116  CSVTPIVENGTANQFTNLSLDASEAESL-----KNVLKNGSGGDSSSKLFEQNLKKAPNG 170

Query: 633  -STKTVEDLCPRGLINSGNLCFLNATLQAXXXXXXXXXXXXEIRNRSISKVCYPTLGAFV 809
             +   V+DL PRGLINSGNLCFL+AT+QA            E+R R+I KV YPTL AF 
Sbjct: 171  HAVMHVKDLQPRGLINSGNLCFLSATVQALLACSPFVQLLQELRTRTIPKVGYPTLKAFA 230

Query: 810  DFVSVLDMPNGITLKMKNIPALETGRPFSPSMFEGVLKKFTPDVSNSFSGRPRQEDAQEF 989
            +FV+  DMP+G+ LK K+  + E GR F P MFE VLK FTPDV NS SGRPRQEDAQE 
Sbjct: 231  EFVTQFDMPSGVNLKKKDTDSFEFGRAFCPVMFEDVLKNFTPDVPNSISGRPRQEDAQE- 289

Query: 990  LSFVXXXXXXXXXXXXXXXXXXXEFLSFVMDQMHDELLKLEGQSSG-NEGESYLVSSADD 1166
                                    FLSFVMDQMHDELLKLEGQSS  N  +S+LVSS +D
Sbjct: 290  ------------------------FLSFVMDQMHDELLKLEGQSSSLNGSKSFLVSSVED 325

Query: 1167 DDWETVGPKNKSAVTRTQNFVPSD 1238
            D+WETVGPKNKSAVTRTQ+F+PS+
Sbjct: 326  DEWETVGPKNKSAVTRTQSFIPSE 349


>ref|XP_003534373.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 24-like [Glycine
            max]
          Length = 532

 Score =  246 bits (628), Expect = 9e-63
 Identities = 168/379 (44%), Positives = 213/379 (56%), Gaps = 15/379 (3%)
 Frame = +3

Query: 147  VFLFGSFSEDEAKSLLHQSSIEQAEKNDLPVDASSNVTRLSFGSFDGDLTIK----LPYS 314
            +FLFGSF+EDE +SLL + S  + EK   PV+ +    +L FGS +  +T++    L  S
Sbjct: 1    MFLFGSFTEDETQSLLSKQSSGKKEK---PVEKN----QLQFGSLNS-VTVESNNLLNSS 52

Query: 315  NGTTNSKPLEFRKNNYVKKV--DAP--GGNSKENGSIQS----SLHCSALSNGNKETKRT 470
                NS P + +K N VK V  ++P   G  KENGSI +    S+  S +S    E K  
Sbjct: 53   KSPDNSPPSDSQKCNGVKSVSDNSPEVSGTIKENGSITNISPRSITTSTISVNEVEEKNA 112

Query: 471  CGINLTANVSENKVVIPGKLVTLAQHADKEVIKEYVNGTSHENLHNH-CQEASNG-STKT 644
                L      +       L      + K + K      S   L +   Q+A NG +   
Sbjct: 113  NSFTLRGEDGPSNKFTKLSLDASEAESLKNLHKIGNGDDSAPKLSDREPQKAPNGHAVMH 172

Query: 645  VEDLCPRGLINSGNLCFLNATLQAXXXXXXXXXXXXEIRNRSISKVCYPTLGAFVDFVSV 824
            V+D+ PRGLINSGNLCFLNAT+QA            ++R R++ KV YPTL AF +F++ 
Sbjct: 173  VKDILPRGLINSGNLCFLNATMQALLSCSPFVHLLQQLRTRNLPKVGYPTLTAFAEFIAQ 232

Query: 825  LDMPNGITLKMKNIPALETGRPFSPSMFEGVLKKFTPDVSNSFSGRPRQEDAQEFLSFVX 1004
             DMP+   +K ++    E+GRPF P MFE VLK FTPDV NS SGRPRQEDAQE      
Sbjct: 233  FDMPSTTKVKKQDTDTFESGRPFRPVMFEVVLKNFTPDVPNSISGRPRQEDAQE------ 286

Query: 1005 XXXXXXXXXXXXXXXXXXEFLSFVMDQMHDELLKLEGQSSG-NEGESYLVSSADDDDWET 1181
                               FLSFVMDQMHDELLKLEG SS  N  +S LVSS +DD+WET
Sbjct: 287  -------------------FLSFVMDQMHDELLKLEGHSSSLNGSKSSLVSSVEDDEWET 327

Query: 1182 VGPKNKSAVTRTQNFVPSD 1238
            VGPKNKSAVTRTQ+F+PSD
Sbjct: 328  VGPKNKSAVTRTQSFLPSD 346


>ref|XP_003539934.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 24-like [Glycine
            max]
          Length = 530

 Score =  244 bits (623), Expect = 3e-62
 Identities = 165/380 (43%), Positives = 217/380 (57%), Gaps = 16/380 (4%)
 Frame = +3

Query: 147  VFLFGSFSEDEAKSLLHQSSIEQAEKNDLPVDASSNVTRLSFGSFDGDLTIK----LPYS 314
            +F+FGSF+EDE +SLL + S  + EK   PV+ +    +L FGS +  +T++    L  S
Sbjct: 1    MFVFGSFTEDETRSLLSKQSFGKKEK---PVEKN----QLQFGSLNS-VTVESNNLLNSS 52

Query: 315  NGTTNSKPLEFRKNNYVKKV--DAP--GGNSKENGSIQ--SSLHCSALSNGNKETKRTCG 476
              + N+ P + RK N VK    ++P   G  KENGSI   S    S +S    E K    
Sbjct: 53   KASYNAPPSDSRKCNGVKSAIDNSPEVSGTVKENGSITNISPRSTSTISVNEVEEKN--- 109

Query: 477  INLTANVSENKVVIPGKLVTLAQHADKEVIKEYVNGTSHENL----HNHCQEASNG-STK 641
            +N      E+  +     ++L     + +   +  G+  ++         Q+A NG +  
Sbjct: 110  VNFFTLRCEDGPLNKFTKLSLDASEAESLKNVHTTGSGDDSAPKLPDREPQKAPNGHAVM 169

Query: 642  TVEDLCPRGLINSGNLCFLNATLQAXXXXXXXXXXXXEIRNRSISKVCYPTLGAFVDFVS 821
             V+D+ PRGLINSGNLCFLNAT+QA            ++R  ++ KV YPTL AF +F++
Sbjct: 170  HVKDILPRGLINSGNLCFLNATMQALLSCSPFVHLLQQLRTCNLPKVGYPTLTAFAEFIT 229

Query: 822  VLDMPNGITLKMKNIPALETGRPFSPSMFEGVLKKFTPDVSNSFSGRPRQEDAQEFLSFV 1001
              DMP+   LK ++    E+GRPF P MFEGVLK FTPDV NS SGRPRQEDAQE     
Sbjct: 230  QFDMPSITKLKKQDADTFESGRPFRPVMFEGVLKNFTPDVPNSISGRPRQEDAQE----- 284

Query: 1002 XXXXXXXXXXXXXXXXXXXEFLSFVMDQMHDELLKLEGQSSG-NEGESYLVSSADDDDWE 1178
                                FLSFVMDQMHDELLKLEGQSS  N  +S LVSS +DD+WE
Sbjct: 285  --------------------FLSFVMDQMHDELLKLEGQSSSLNGSKSSLVSSVEDDEWE 324

Query: 1179 TVGPKNKSAVTRTQNFVPSD 1238
            TVGPKNKSAVTRTQ+F+PS+
Sbjct: 325  TVGPKNKSAVTRTQSFLPSE 344


>ref|XP_002867323.1| ubiquitin-specific protease 24 [Arabidopsis lyrata subsp. lyrata]
            gi|297313159|gb|EFH43582.1| ubiquitin-specific protease
            24 [Arabidopsis lyrata subsp. lyrata]
          Length = 550

 Score =  205 bits (521), Expect = 2e-50
 Identities = 145/391 (37%), Positives = 200/391 (51%), Gaps = 23/391 (5%)
 Frame = +3

Query: 135  TQQQVFLFGSFSEDEAKSLLHQSSIEQAEKNDLPVDASSNVTRLSF----GSFDGDLTIK 302
            +++++F+FGSF+E E +S L Q   +  + +      S     L+      S + +  +K
Sbjct: 2    SEKKLFVFGSFTEHETRSFLEQKPTKDPQNHKDKCVGSIQFGSLNLVAENSSVNTNGELK 61

Query: 303  LPYSNGTTNSKPLEFR-------KNNYVKKVDA--PGGNSK-------ENGSIQSSLHCS 434
               ++GT  S   + R        +N +   DA  P  +S        ENG I+      
Sbjct: 62   KGQADGTVKSAGSQERLDASRPDSSNKIDDNDAKLPRKSSSRVPEHVVENGIIKEISESK 121

Query: 435  ALSNGNKETKRTCGINLTANVSENKVVIPGKLVTLAQHADKEVIKEYVNGTSHENLHNHC 614
            +L+NG        G++           +     +  Q  D E      +  S +   N  
Sbjct: 122  SLNNGVAVKTDPIGLDKLCMSDGESDPVYKASSSKFQALDNEDFSSDSSSGSIQRKKN-- 179

Query: 615  QEASNGSTKTVEDLCPRGLINSGNLCFLNATLQAXXXXXXXXXXXXEIRNRSISKVCYPT 794
            Q+    S   V+D  PRGLIN+GNLCFLNATLQA             I+ + I K   PT
Sbjct: 180  QKVPTESVPPVKDFTPRGLINAGNLCFLNATLQALLSCSPFVQLLQRIQLQDIPKADSPT 239

Query: 795  LGAFVDFVSVLDMPNGITLKMKNIPALETGRPFSPSMFEGVLKKFTPDVSNSFSGRPRQE 974
            L AF +F+S LD+P+  +++  N+  +E GRPF P+MFEGVL+ FTPDV N+ SGRPRQE
Sbjct: 240  LAAFSEFISELDVPSSSSIR-NNVTVVEAGRPFRPAMFEGVLRNFTPDVLNNMSGRPRQE 298

Query: 975  DAQEFLSFVXXXXXXXXXXXXXXXXXXXEFLSFVMDQMHDELLKLEGQS-SGNEGESYLV 1151
            DAQ                         EFLSF+MDQMHDELLKL+ QS      +S ++
Sbjct: 299  DAQ-------------------------EFLSFIMDQMHDELLKLKEQSPKVTASKSSVI 333

Query: 1152 SSA--DDDDWETVGPKNKSAVTRTQNFVPSD 1238
            SSA  DDD+WETVGPKNKSAVTRTQ+FVPS+
Sbjct: 334  SSANDDDDEWETVGPKNKSAVTRTQSFVPSE 364