BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00019041
         (438 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003525530.1| PREDICTED: uncharacterized protein LOC100786...   176   2e-42
ref|XP_002511274.1| replication factor C / DNA polymerase III ga...   174   5e-42
emb|CBI14898.3| unnamed protein product [Vitis vinifera]              172   3e-41
ref|XP_002321657.1| predicted protein [Populus trichocarpa] gi|2...   171   7e-41
ref|XP_003608912.1| DNA polymerase III subunit gamma/tau [Medica...   170   1e-40

>ref|XP_003525530.1| PREDICTED: uncharacterized protein LOC100786687 [Glycine max]
          Length = 976

 Score =  176 bits (446), Expect = 2e-42
 Identities = 87/144 (60%), Positives = 110/144 (76%)
 Frame = -1

Query: 432 PLMSEEVRFIDQSKQRRSQKHIGKEAIPYSDGPRSLHQKFRPKFFSEVVGQNVVASSLLS 253
           PL+ + V   D +  R S +HIG E  P S+ PRSL  KFRPK FS++VGQNV+  SLL 
Sbjct: 259 PLILQHVNETDLNGHR-SMRHIGVEISPTSETPRSLSMKFRPKSFSDLVGQNVIGKSLLG 317

Query: 252 AIANERILPFYLFHGPRGTGKTSSSRIFAAALNCLSHEEIKPCGMCQDCLSFFSGRSRDV 73
           AI+  RI  FY+FHGPRGTGKTS+SRIFAAA+NCLS  E KPCG+C++C+ FF GRS++V
Sbjct: 318 AISTGRISSFYIFHGPRGTGKTSASRIFAAAMNCLSPLEQKPCGLCRECVLFFLGRSKNV 377

Query: 72  KEVDSVRINRVDKIRWIIKSASAP 1
           KEVDS+RINR DK++ ++KSA  P
Sbjct: 378 KEVDSLRINRADKVKSLVKSACIP 401


>ref|XP_002511274.1| replication factor C / DNA polymerase III gamma-tau subunit,
           putative [Ricinus communis] gi|223550389|gb|EEF51876.1|
           replication factor C / DNA polymerase III gamma-tau
           subunit, putative [Ricinus communis]
          Length = 1025

 Score =  174 bits (442), Expect = 5e-42
 Identities = 84/115 (73%), Positives = 98/115 (85%)
 Frame = -1

Query: 345 SDGPRSLHQKFRPKFFSEVVGQNVVASSLLSAIANERILPFYLFHGPRGTGKTSSSRIFA 166
           ++ PRS  QKFRPK F E+VGQNVV  SLLSAIA  R+   YLFHGPRGTGKTS+SRIFA
Sbjct: 289 NESPRSFSQKFRPKSFEELVGQNVVVRSLLSAIAQGRVTSLYLFHGPRGTGKTSASRIFA 348

Query: 165 AALNCLSHEEIKPCGMCQDCLSFFSGRSRDVKEVDSVRINRVDKIRWIIKSASAP 1
           AALNCLS EE KPCG+C++C+ FFSGRSRDVKEVDSVRINRV++IR +IK+A+ P
Sbjct: 349 AALNCLSLEEYKPCGLCRECVQFFSGRSRDVKEVDSVRINRVERIRALIKNAAIP 403


>emb|CBI14898.3| unnamed protein product [Vitis vinifera]
          Length = 875

 Score =  172 bits (435), Expect = 3e-41
 Identities = 84/124 (67%), Positives = 100/124 (80%)
 Frame = -1

Query: 381 SQKHIGKEAIPYSDGPRSLHQKFRPKFFSEVVGQNVVASSLLSAIANERILPFYLFHGPR 202
           S K    E  PYS+ PRSL QKFRPK F+E+VGQNVVA SLL AI+  RI  FYLFHGPR
Sbjct: 137 SWKCFNNEITPYSESPRSLSQKFRPKAFNELVGQNVVARSLLGAISRGRITSFYLFHGPR 196

Query: 201 GTGKTSSSRIFAAALNCLSHEEIKPCGMCQDCLSFFSGRSRDVKEVDSVRINRVDKIRWI 22
           GTGKTS+SRIFAAALNCLS EE +PCG+C++C+ FFSGRSRD KE+D+VRIN+  ++R +
Sbjct: 197 GTGKTSASRIFAAALNCLSLEEHRPCGLCRECVLFFSGRSRDSKEIDTVRINQTGRMRSL 256

Query: 21  IKSA 10
           IK A
Sbjct: 257 IKHA 260


>ref|XP_002321657.1| predicted protein [Populus trichocarpa] gi|222868653|gb|EEF05784.1|
           predicted protein [Populus trichocarpa]
          Length = 907

 Score =  171 bits (432), Expect = 7e-41
 Identities = 91/144 (63%), Positives = 105/144 (72%)
 Frame = -1

Query: 432 PLMSEEVRFIDQSKQRRSQKHIGKEAIPYSDGPRSLHQKFRPKFFSEVVGQNVVASSLLS 253
           PL+S +V        +RS KH   E       PRSL QKFRPK F E+VGQ VVA SLL 
Sbjct: 223 PLLSRDVAETSPCG-KRSWKHATNET------PRSLSQKFRPKSFDELVGQGVVARSLLG 275

Query: 252 AIANERILPFYLFHGPRGTGKTSSSRIFAAALNCLSHEEIKPCGMCQDCLSFFSGRSRDV 73
           AI+  RI   YLFHGPRGTGKTS+S+IFAAALNCLSHEE KPCG+C++C  FFSGRS+DV
Sbjct: 276 AISRGRITSLYLFHGPRGTGKTSASKIFAAALNCLSHEENKPCGLCRECYVFFSGRSQDV 335

Query: 72  KEVDSVRINRVDKIRWIIKSASAP 1
           KEVDSVRIN+  +IR +IK AS P
Sbjct: 336 KEVDSVRINQTRRIRSLIKDASMP 359


>ref|XP_003608912.1| DNA polymerase III subunit gamma/tau [Medicago truncatula]
           gi|355509967|gb|AES91109.1| DNA polymerase III subunit
           gamma/tau [Medicago truncatula]
          Length = 936

 Score =  170 bits (431), Expect = 1e-40
 Identities = 84/141 (59%), Positives = 105/141 (74%)
 Frame = -1

Query: 432 PLMSEEVRFIDQSKQRRSQKHIGKEAIPYSDGPRSLHQKFRPKFFSEVVGQNVVASSLLS 253
           PLM + V   D   Q+  +  IG E  P  + PRSL  KFRPK F+++VGQN+V  SL  
Sbjct: 245 PLMLQHVNETDLHGQKSMRHIIGSEISPTLETPRSLSMKFRPKSFNDLVGQNMVGKSLSG 304

Query: 252 AIANERILPFYLFHGPRGTGKTSSSRIFAAALNCLSHEEIKPCGMCQDCLSFFSGRSRDV 73
           AI+  RI  FYLFHGPRGTGKTS+SRIFAAALNC+S EE +PCG+C +C+ FFSGRS+DV
Sbjct: 305 AISRGRIASFYLFHGPRGTGKTSASRIFAAALNCISLEERRPCGLCSECVLFFSGRSKDV 364

Query: 72  KEVDSVRINRVDKIRWIIKSA 10
           KEVDS+RINR DK + ++K+A
Sbjct: 365 KEVDSLRINRPDKAKSLVKNA 385