BLASTX nr result

ID: Bupleurum21_contig00019033 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00019033
         (501 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI17738.3| unnamed protein product [Vitis vinifera]              282   2e-74
ref|XP_002267910.1| PREDICTED: scarecrow-like protein 3 [Vitis v...   282   2e-74
emb|CAN67001.1| hypothetical protein VITISV_031083 [Vitis vinifera]   278   3e-73
ref|XP_002303907.1| GRAS family transcription factor [Populus tr...   267   8e-70
ref|XP_002299218.1| GRAS family transcription factor [Populus tr...   262   2e-68

>emb|CBI17738.3| unnamed protein product [Vitis vinifera]
          Length = 435

 Score =  282 bits (721), Expect = 2e-74
 Identities = 143/166 (86%), Positives = 154/166 (92%), Gaps = 1/166 (0%)
 Frame = -3

Query: 499 AGMIQEDESPSV-SSPLQFFSLMSLSPGIGSPYPWLREMKSEERGLYLIHLLVASANHVA 323
           AGMIQED S SV SSPLQ FSLMSLSPG+GSPYPWL+E+KSEERGLYLI LLVA ANHVA
Sbjct: 2   AGMIQEDGSSSVTSSPLQIFSLMSLSPGLGSPYPWLKELKSEERGLYLIRLLVACANHVA 61

Query: 322 AGSVENANMGLEQISHLSSPDGDTMQRIAAYFTEALADRMLKGWPGLHKALNSTKISLVS 143
           AGS+ENAN+GLE ISHL+SPDGDT+QRIAAYFTEALADRMLKGWPGLHKALNSTKIS +S
Sbjct: 62  AGSIENANIGLEHISHLASPDGDTVQRIAAYFTEALADRMLKGWPGLHKALNSTKISSIS 121

Query: 142 EERLVHKLFFELCPFLKLSYVLTNQAIMEAMEGEKVVHIIDLYSVE 5
           EE LV KLFFELCPFLKLSYV+TNQAI+EAMEGEK+VHIIDL S E
Sbjct: 122 EEILVQKLFFELCPFLKLSYVITNQAIIEAMEGEKMVHIIDLNSFE 167


>ref|XP_002267910.1| PREDICTED: scarecrow-like protein 3 [Vitis vinifera]
          Length = 478

 Score =  282 bits (721), Expect = 2e-74
 Identities = 143/166 (86%), Positives = 154/166 (92%), Gaps = 1/166 (0%)
 Frame = -3

Query: 499 AGMIQEDESPSV-SSPLQFFSLMSLSPGIGSPYPWLREMKSEERGLYLIHLLVASANHVA 323
           AGMIQED S SV SSPLQ FSLMSLSPG+GSPYPWL+E+KSEERGLYLI LLVA ANHVA
Sbjct: 2   AGMIQEDGSSSVTSSPLQIFSLMSLSPGLGSPYPWLKELKSEERGLYLIRLLVACANHVA 61

Query: 322 AGSVENANMGLEQISHLSSPDGDTMQRIAAYFTEALADRMLKGWPGLHKALNSTKISLVS 143
           AGS+ENAN+GLE ISHL+SPDGDT+QRIAAYFTEALADRMLKGWPGLHKALNSTKIS +S
Sbjct: 62  AGSIENANIGLEHISHLASPDGDTVQRIAAYFTEALADRMLKGWPGLHKALNSTKISSIS 121

Query: 142 EERLVHKLFFELCPFLKLSYVLTNQAIMEAMEGEKVVHIIDLYSVE 5
           EE LV KLFFELCPFLKLSYV+TNQAI+EAMEGEK+VHIIDL S E
Sbjct: 122 EEILVQKLFFELCPFLKLSYVITNQAIIEAMEGEKMVHIIDLNSFE 167


>emb|CAN67001.1| hypothetical protein VITISV_031083 [Vitis vinifera]
          Length = 545

 Score =  278 bits (711), Expect = 3e-73
 Identities = 141/164 (85%), Positives = 152/164 (92%), Gaps = 1/164 (0%)
 Frame = -3

Query: 493 MIQEDESPSV-SSPLQFFSLMSLSPGIGSPYPWLREMKSEERGLYLIHLLVASANHVAAG 317
           MIQED S SV SSPLQ FSLMSLSPG+GSPYPWL+E+KSEERGLYLI LLVA ANHVAAG
Sbjct: 1   MIQEDGSSSVTSSPLQIFSLMSLSPGLGSPYPWLKELKSEERGLYLIRLLVACANHVAAG 60

Query: 316 SVENANMGLEQISHLSSPDGDTMQRIAAYFTEALADRMLKGWPGLHKALNSTKISLVSEE 137
           S+ENAN+GLE ISHL+SPDGDT+QRIAAYFTEALADRMLKGWPGLHKALNSTKIS +SEE
Sbjct: 61  SIENANIGLEHISHLASPDGDTVQRIAAYFTEALADRMLKGWPGLHKALNSTKISSISEE 120

Query: 136 RLVHKLFFELCPFLKLSYVLTNQAIMEAMEGEKVVHIIDLYSVE 5
            LV KLFFELCPFLKLSYV+TNQAI+EAMEGEK+VHIIDL S E
Sbjct: 121 ILVQKLFFELCPFLKLSYVITNQAIIEAMEGEKMVHIIDLNSFE 164


>ref|XP_002303907.1| GRAS family transcription factor [Populus trichocarpa]
           gi|222841339|gb|EEE78886.1| GRAS family transcription
           factor [Populus trichocarpa]
          Length = 476

 Score =  267 bits (682), Expect = 8e-70
 Identities = 131/166 (78%), Positives = 148/166 (89%)
 Frame = -3

Query: 499 AGMIQEDESPSVSSPLQFFSLMSLSPGIGSPYPWLREMKSEERGLYLIHLLVASANHVAA 320
           AGM+QE+ S SV+SP QFF  M LSPGIGSPYPWLRE+KSEERGL LIHLL+A ANHVA 
Sbjct: 2   AGMVQEEGSSSVTSPPQFFPWMQLSPGIGSPYPWLRELKSEERGLCLIHLLLACANHVAV 61

Query: 319 GSVENANMGLEQISHLSSPDGDTMQRIAAYFTEALADRMLKGWPGLHKALNSTKISLVSE 140
           GSVENAN+ LE ISHL+SPDGDTMQRIAAYFT ALADR+LKGWPGLHKALN  ++SL+SE
Sbjct: 62  GSVENANISLEHISHLASPDGDTMQRIAAYFTAALADRILKGWPGLHKALNPKQVSLISE 121

Query: 139 ERLVHKLFFELCPFLKLSYVLTNQAIMEAMEGEKVVHIIDLYSVEP 2
           E LV +LFFELCPFLKLSYV+TN+AI+E+MEGEK+VHIIDL S EP
Sbjct: 122 EILVQRLFFELCPFLKLSYVITNEAIIESMEGEKMVHIIDLNSSEP 167


>ref|XP_002299218.1| GRAS family transcription factor [Populus trichocarpa]
           gi|222846476|gb|EEE84023.1| GRAS family transcription
           factor [Populus trichocarpa]
          Length = 476

 Score =  262 bits (669), Expect = 2e-68
 Identities = 133/167 (79%), Positives = 147/167 (88%), Gaps = 1/167 (0%)
 Frame = -3

Query: 499 AGMIQEDESPSV-SSPLQFFSLMSLSPGIGSPYPWLREMKSEERGLYLIHLLVASANHVA 323
           AGM QE+ S SV SSPLQFF  M LSPG GSPYPWLRE+KSE+RGL LIHLL+A ANHVA
Sbjct: 2   AGMAQEEGSSSVTSSPLQFFPWMPLSPGTGSPYPWLRELKSEDRGLCLIHLLLACANHVA 61

Query: 322 AGSVENANMGLEQISHLSSPDGDTMQRIAAYFTEALADRMLKGWPGLHKALNSTKISLVS 143
           AGS+ENAN+GLEQISHL+SPDGDTMQRIAAYFT  LADR+LKGWPGLHKALN  + SL+S
Sbjct: 62  AGSIENANIGLEQISHLASPDGDTMQRIAAYFTAGLADRILKGWPGLHKALNPKQASLIS 121

Query: 142 EERLVHKLFFELCPFLKLSYVLTNQAIMEAMEGEKVVHIIDLYSVEP 2
           EE LV +LFFEL PFLKLSYV+TNQAI+EAMEGEK+VHIIDL S EP
Sbjct: 122 EEILVQRLFFELFPFLKLSYVITNQAIIEAMEGEKMVHIIDLNSFEP 168


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