BLASTX nr result
ID: Bupleurum21_contig00019021
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Bupleurum21_contig00019021
(1203 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002270543.2| PREDICTED: CCR4-NOT transcription complex su... 365 1e-98
emb|CBI24630.3| unnamed protein product [Vitis vinifera] 363 6e-98
ref|XP_002301259.1| predicted protein [Populus trichocarpa] gi|2... 363 6e-98
ref|XP_004155261.1| PREDICTED: CCR4-NOT transcription complex su... 361 2e-97
ref|XP_004134286.1| PREDICTED: LOW QUALITY PROTEIN: CCR4-NOT tra... 355 1e-95
>ref|XP_002270543.2| PREDICTED: CCR4-NOT transcription complex subunit 1-like [Vitis
vinifera]
Length = 1586
Score = 365 bits (937), Expect = 1e-98
Identities = 187/352 (53%), Positives = 253/352 (71%), Gaps = 6/352 (1%)
Frame = +2
Query: 164 PDEMLPL-SLTASAHIRYLLRNVNDSNFDS----VYQELCEFIGYGTEESILVLQTCFDQ 328
PD M L S S+ IR+LL +NDSNFDS V +ELC+FI YG E SIL+LQTC D
Sbjct: 171 PDSMKMLFSSLISSQIRFLLHGLNDSNFDSNFDSVVRELCQFIEYGYEASILLLQTCLDH 230
Query: 329 LNIDGKDYKNIQLEP-IYVSIFRNMLNRPNFSTLLCESVRSLPINEDHLESIGKALQLAA 505
+N G D ++QL+P + +IFR +L++PNFST+LCE++RS I E L LQ +
Sbjct: 231 MNFHGGDMNDMQLKPDVLAAIFRYLLDKPNFSTVLCEALRSSVIGEGFLGEFCNVLQFSV 290
Query: 506 PERIIIGLALTESENHDVRMCGRSFCMTQIAQLCSNHEELDSVEQIQNILIFLNQSEGLC 685
E+I +GLAL +SEN DVR G++FCM QI +LC N +DS E+IQ I++FL QSEGL
Sbjct: 291 SEKIGLGLALADSENGDVRTSGQNFCMRQIEKLCGNPASIDSHEKIQKIIMFLYQSEGLS 350
Query: 686 KHVNSFMEILSLVHSKEDSEFIFAPLVTDEIREINFFRNLEMLNESSDYEFDTILDEMEK 865
KHV+SFM++LSL+ KE F+ APL++D++ E +F RNL++ + S+ EFD+IL EME
Sbjct: 351 KHVDSFMQMLSLMEFKERPPFVLAPLLSDDLHEDSFSRNLDLFYDFSENEFDSILAEMEN 410
Query: 866 ELSLADLMSEFGYGCTVNVLQCKEILSLFLPLTEVTVAKLFSTVVCKNFGLGSCQDTYVT 1045
+ S+AD+M E GYGCT++ CKE+LSLFLPL+EVT++++ ST+ + GL Q++Y T
Sbjct: 411 DTSMADIMRELGYGCTLSTSHCKEVLSLFLPLSEVTLSRILSTIARTHAGLEDNQNSYST 470
Query: 1046 FCSAITNSSLSDFPHLDSWNVDVLIESIKQVAPGISWRNVFENFDHEGFHIP 1201
FCSAI +S+LSD L WNVDVL++SIKQ+APGI+W V EN DHEGF+ P
Sbjct: 471 FCSAIGSSALSDSSCLSCWNVDVLVDSIKQLAPGINWTLVMENLDHEGFYFP 522
>emb|CBI24630.3| unnamed protein product [Vitis vinifera]
Length = 1496
Score = 363 bits (931), Expect = 6e-98
Identities = 182/340 (53%), Positives = 248/340 (72%), Gaps = 5/340 (1%)
Frame = +2
Query: 197 SAHIRYLLRNVNDSNFDS----VYQELCEFIGYGTEESILVLQTCFDQLNIDGKDYKNIQ 364
S+ IR+LL +NDSNFDS V +ELC+FI YG E SIL+LQTC D +N G D ++Q
Sbjct: 10 SSQIRFLLHGLNDSNFDSNFDSVVRELCQFIEYGYEASILLLQTCLDHMNFHGGDMNDMQ 69
Query: 365 LEP-IYVSIFRNMLNRPNFSTLLCESVRSLPINEDHLESIGKALQLAAPERIIIGLALTE 541
L+P + +IFR +L++PNFST+LCE++RS I E L LQ + E+I +GLAL +
Sbjct: 70 LKPDVLAAIFRYLLDKPNFSTVLCEALRSSVIGEGFLGEFCNVLQFSVSEKIGLGLALAD 129
Query: 542 SENHDVRMCGRSFCMTQIAQLCSNHEELDSVEQIQNILIFLNQSEGLCKHVNSFMEILSL 721
SEN DVR G++FCM QI +LC N +DS E+IQ I++FL QSEGL KHV+SFM++LSL
Sbjct: 130 SENGDVRTSGQNFCMRQIEKLCGNPASIDSHEKIQKIIMFLYQSEGLSKHVDSFMQMLSL 189
Query: 722 VHSKEDSEFIFAPLVTDEIREINFFRNLEMLNESSDYEFDTILDEMEKELSLADLMSEFG 901
+ KE F+ APL++D++ E +F RNL++ + S+ EFD+IL EME + S+AD+M E G
Sbjct: 190 MEFKERPPFVLAPLLSDDLHEDSFSRNLDLFYDFSENEFDSILAEMENDTSMADIMRELG 249
Query: 902 YGCTVNVLQCKEILSLFLPLTEVTVAKLFSTVVCKNFGLGSCQDTYVTFCSAITNSSLSD 1081
YGCT++ CKE+LSLFLPL+EVT++++ ST+ + GL Q++Y TFCSAI +S+LSD
Sbjct: 250 YGCTLSTSHCKEVLSLFLPLSEVTLSRILSTIARTHAGLEDNQNSYSTFCSAIGSSALSD 309
Query: 1082 FPHLDSWNVDVLIESIKQVAPGISWRNVFENFDHEGFHIP 1201
L WNVDVL++SIKQ+APGI+W V EN DHEGF+ P
Sbjct: 310 SSCLSCWNVDVLVDSIKQLAPGINWTLVMENLDHEGFYFP 349
>ref|XP_002301259.1| predicted protein [Populus trichocarpa] gi|222842985|gb|EEE80532.1|
predicted protein [Populus trichocarpa]
Length = 1987
Score = 363 bits (931), Expect = 6e-98
Identities = 174/343 (50%), Positives = 250/343 (72%)
Frame = +2
Query: 173 MLPLSLTASAHIRYLLRNVNDSNFDSVYQELCEFIGYGTEESILVLQTCFDQLNIDGKDY 352
M+ LS T + IR+LL ++N++N DSV+++LC+F+ Y E SIL LQTC D L D
Sbjct: 1 MIELSSTVPSQIRFLLHSLNEANVDSVFRDLCQFMEYELEGSILTLQTCLDYLKTD---L 57
Query: 353 KNIQLEPIYVSIFRNMLNRPNFSTLLCESVRSLPINEDHLESIGKALQLAAPERIIIGLA 532
KN+ LEP+ S+F+ +L++PNF+T+ C+S++S I ED LE + L+L+ E+I GLA
Sbjct: 58 KNMHLEPVLASVFKFVLDKPNFATVFCQSLKSTEITEDFLEKLSNLLKLSVAEKIGTGLA 117
Query: 533 LTESENHDVRMCGRSFCMTQIAQLCSNHEELDSVEQIQNILIFLNQSEGLCKHVNSFMEI 712
L+ESEN D RM + FC+ +I +LC+N ++SVEQIQNI++FL +SEGL KHV++FM++
Sbjct: 118 LSESENADTRMFAKKFCLAKIEELCANPVPMNSVEQIQNIVMFLQRSEGLSKHVDNFMQM 177
Query: 713 LSLVHSKEDSEFIFAPLVTDEIREINFFRNLEMLNESSDYEFDTILDEMEKELSLADLMS 892
LSL+ SK+ F+ PL++DE+RE NF RN+++++ S+D EFD IL EME+E+SL D++
Sbjct: 178 LSLMQSKDVVPFVLTPLISDELREANFLRNMDLIHGSTDSEFDAILAEMEEEMSLGDIVK 237
Query: 893 EFGYGCTVNVLQCKEILSLFLPLTEVTVAKLFSTVVCKNFGLGSCQDTYVTFCSAITNSS 1072
E GYGCT +VL CKEILS FLPLTEVT++K+ T+ GL Q T+ TF A+ +
Sbjct: 238 ELGYGCTFDVLHCKEILSPFLPLTEVTISKILGTIARNLTGLEDNQSTFSTFGLALGCNI 297
Query: 1073 LSDFPHLDSWNVDVLIESIKQVAPGISWRNVFENFDHEGFHIP 1201
+D P L SW++DVL+++IKQ+APG +W V EN DHEGF+IP
Sbjct: 298 TTDLPQLSSWDIDVLVKTIKQLAPGTNWIQVIENLDHEGFYIP 340
>ref|XP_004155261.1| PREDICTED: CCR4-NOT transcription complex subunit 1-like [Cucumis
sativus]
Length = 962
Score = 361 bits (926), Expect = 2e-97
Identities = 173/343 (50%), Positives = 251/343 (73%)
Frame = +2
Query: 173 MLPLSLTASAHIRYLLRNVNDSNFDSVYQELCEFIGYGTEESILVLQTCFDQLNIDGKDY 352
ML S S+ IR+LL ++ +SN +SV +EL EFI G E S ++L+TC D G D
Sbjct: 1 MLMFSTATSSQIRFLLHSLTESNAESVLKELSEFIDCGIEGSFILLRTCLDHFTSHGTDL 60
Query: 353 KNIQLEPIYVSIFRNMLNRPNFSTLLCESVRSLPINEDHLESIGKALQLAAPERIIIGLA 532
+N L + S+F+++L+RPNFST+LCES++S IN+ LE+I L L+ ERI +GLA
Sbjct: 61 ENPLLLLVISSVFKHLLDRPNFSTILCESLKSRDINQVTLENISNLLNLSMCERIGVGLA 120
Query: 533 LTESENHDVRMCGRSFCMTQIAQLCSNHEELDSVEQIQNILIFLNQSEGLCKHVNSFMEI 712
+++SEN D R+CG++FC++QI +LC+N +DS +QIQ+I++FL +SEGL KH++SFM++
Sbjct: 121 VSDSENLDARLCGKNFCISQIEELCANAVSVDSTQQIQDIIMFLQRSEGLSKHLDSFMQM 180
Query: 713 LSLVHSKEDSEFIFAPLVTDEIREINFFRNLEMLNESSDYEFDTILDEMEKELSLADLMS 892
LSLV K+ +EF+ +PL++DE+RE F R++ + +ES D +FD+IL EMEKE+S+ D+M
Sbjct: 181 LSLVQLKDVTEFVLSPLLSDELREEKFLRDVNLSHESLDNDFDSILAEMEKEMSMGDIMK 240
Query: 893 EFGYGCTVNVLQCKEILSLFLPLTEVTVAKLFSTVVCKNFGLGSCQDTYVTFCSAITNSS 1072
E GYGCTVN QCKEILSLFLPLTE+T++K+ + + GL ++ Y TF A+ S
Sbjct: 241 ELGYGCTVNATQCKEILSLFLPLTEITISKILGMIARNHTGLEDSRNIYATFSLALGFSG 300
Query: 1073 LSDFPHLDSWNVDVLIESIKQVAPGISWRNVFENFDHEGFHIP 1201
LSD P L+SW+VDVL++++KQ+AP + W V EN DHEGF+IP
Sbjct: 301 LSDLPSLNSWDVDVLLDTVKQLAPKVDWIRVMENLDHEGFYIP 343
>ref|XP_004134286.1| PREDICTED: LOW QUALITY PROTEIN: CCR4-NOT transcription complex
subunit 1-like [Cucumis sativus]
Length = 2427
Score = 355 bits (912), Expect = 1e-95
Identities = 173/344 (50%), Positives = 251/344 (72%), Gaps = 1/344 (0%)
Frame = +2
Query: 173 MLPLSLTASAHIRYLLRNVNDSNFDSVYQELCEFIGYGTEESILVLQTCFDQLNIDGKDY 352
ML S S+ IR+LL ++ +SN +SV +EL EFI G E S ++L+TC D G D
Sbjct: 1 MLMFSTATSSQIRFLLHSLTESNAESVLKELSEFIDCGIEGSFILLRTCLDHFTSHGTDL 60
Query: 353 KNIQLEPIYVSIFRNMLNRPNFSTLLCESVRSLPINEDHLESIGKALQLAAPERIIIGLA 532
+N L + S+F+++L+RPNFST+LCES++S IN+ LE+I L L+ ERI +GLA
Sbjct: 61 ENPLLLLVISSVFKHLLDRPNFSTILCESLKSRDINQVTLENISNLLNLSMCERIGVGLA 120
Query: 533 LTESENHDVRMCGRSFCMTQIAQLCSNHEELDSVEQIQNILIFLNQSEGLCKHVNSFMEI 712
+++SEN D R+CG++FC++QI +LC+N +DS +QIQ+I++FL +SEGL KH++SFM++
Sbjct: 121 VSDSENLDARLCGKNFCISQIEELCANAVSVDSTQQIQDIIMFLQRSEGLSKHLDSFMQM 180
Query: 713 LSLVHSKEDSEFIFAPLVTDEIREINFFR-NLEMLNESSDYEFDTILDEMEKELSLADLM 889
LSLV K+ +EF+ +PL++DE+RE F R ++ + +ES D +FD+IL EMEKE+S+ D+M
Sbjct: 181 LSLVQLKDVTEFVLSPLLSDELREEKFLRWDVNLSHESLDNDFDSILAEMEKEMSMGDIM 240
Query: 890 SEFGYGCTVNVLQCKEILSLFLPLTEVTVAKLFSTVVCKNFGLGSCQDTYVTFCSAITNS 1069
E GYGCTVN QCKEILSLFLPLTE+T++K+ + + GL ++ Y TF A+ S
Sbjct: 241 KELGYGCTVNATQCKEILSLFLPLTEITISKILGMIARNHTGLEDSRNIYSTFSLALGFS 300
Query: 1070 SLSDFPHLDSWNVDVLIESIKQVAPGISWRNVFENFDHEGFHIP 1201
LSD P L+SW+VDVL++++KQ+AP + W V EN DHEGF+IP
Sbjct: 301 GLSDLPSLNSWDVDVLLDTVKQLAPKVDWIRVMENLDHEGFYIP 344