BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00019006
         (2137 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003605608.1| DNA-directed RNA polymerase subunit beta, pa...   843   0.0  
ref|YP_740102.1| ATP synthase CF1 alpha subunit [Daucus carota] ...   909   0.0  
ref|YP_003330956.1| ATP synthase CF1 alpha subunit [Parthenium a...   909   0.0  
ref|YP_004564366.1| ATP synthase CF1 alpha subunit (chloroplast)...   907   0.0  
ref|YP_001837354.1| ATP synthase CF1 alpha subunit [Guizotia aby...   906   0.0  

>ref|XP_003605608.1| DNA-directed RNA polymerase subunit beta, partial [Medicago
            truncatula] gi|355506663|gb|AES87805.1| DNA-directed RNA
            polymerase subunit beta, partial [Medicago truncatula]
          Length = 561

 Score =  843 bits (2179), Expect(2) = 0.0
 Identities = 454/513 (88%), Positives = 466/513 (90%)
 Frame = +1

Query: 316  EILMVTIRADEISNIIRERIEQYNREVKIVNTGTVLQVGDGIARIHGLDEVMAGELVEFE 495
            EI MVTIRADEIS IIRERI+QYN EVKIVNTGTVLQVGDGIARI+GLDEVMAGELVEFE
Sbjct: 73   EIFMVTIRADEISKIIRERIQQYNTEVKIVNTGTVLQVGDGIARIYGLDEVMAGELVEFE 132

Query: 496  EGTVGIALNLESTNVGVVLMGDGLLIQEGSSVKATGRIAQIPVSEAFLGRVVNALAKPID 675
            EGTVGIALNLES NVGVVLMGDGLLIQEGS VKATG IAQIPVSE +LGRVVNALAKPID
Sbjct: 133  EGTVGIALNLESKNVGVVLMGDGLLIQEGSLVKATGIIAQIPVSEGYLGRVVNALAKPID 192

Query: 676  GRGEISASEYRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKT 855
            GRGEISASE RLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKT
Sbjct: 193  GRGEISASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKT 252

Query: 856  AVATDTILNQQGQNVICVYVAIGQKASSVAQVVTTFQERGAMEYTIVVAETADSPATLQY 1035
            AVATDTILNQQGQNVICVYVAIGQKASSVAQVVTT QERGAMEYTI+VAETA+SPATLQY
Sbjct: 253  AVATDTILNQQGQNVICVYVAIGQKASSVAQVVTTLQERGAMEYTIIVAETANSPATLQY 312

Query: 1036 LAPYTGAALAEFFMYRERHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSR 1215
            LAPYTGAALAE+FMYRERHTLIIYDD SKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSR
Sbjct: 313  LAPYTGAALAEYFMYRERHTLIIYDDPSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSR 372

Query: 1216 LLERAAKLGSLLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPA 1395
            LLERAAKL S LGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPA
Sbjct: 373  LLERAAKLSSQLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPA 432

Query: 1396 INVGISVSRVGSAAQIKAMKQVAGKLKXXXXXXXXXXXXXXXXSDLDKATQNQLARGQRL 1575
            INV ISVSRVGSAAQIKAMKQVA                         ATQNQLARG+RL
Sbjct: 433  INVAISVSRVGSAAQIKAMKQVA-------------------------ATQNQLARGRRL 467

Query: 1576 RELLKQSQSAPLAVDEQIMTIYTGTNGYLDSLEIGQVRKFLVELRTYLKTNKPQFQEIIS 1755
            RELLKQSQSAPL V+EQI+T+YTGTNGYLDSLEI  VRKFLVELR YLKTNKP+F EIIS
Sbjct: 468  RELLKQSQSAPLTVEEQIITVYTGTNGYLDSLEIYLVRKFLVELRAYLKTNKPKFNEIIS 527

Query: 1756 STKTFTEEAEALLKEAIQEQMERFILQEQA*KI 1854
            STKTFT EAEALLKEAIQEQME F+LQEQ  KI
Sbjct: 528  STKTFTGEAEALLKEAIQEQMELFLLQEQVEKI 560



 Score =  116 bits (290), Expect(2) = 0.0
 Identities = 57/72 (79%), Positives = 63/72 (87%)
 Frame = +2

Query: 11  NGYSEIEREKLNFLNSTAKALKQLENYKNETILFEQQKALNQVRQRVFQQALQGALGTLS 190
           NGYSEIEREKLN +NS    L+Q ENYKNETI FEQQ+A+NQV+Q V QQALQGALGTL+
Sbjct: 1   NGYSEIEREKLNLINSIYTTLEQFENYKNETIHFEQQRAINQVQQTVLQQALQGALGTLN 60

Query: 191 SCLNNELHLRTI 226
           SCLNNELHLRTI
Sbjct: 61  SCLNNELHLRTI 72


>ref|YP_740102.1| ATP synthase CF1 alpha subunit [Daucus carota]
            gi|122239970|sp|Q0G9X7.1|ATPA_DAUCA RecName: Full=ATP
            synthase subunit alpha, chloroplastic; AltName: Full=ATP
            synthase F1 sector subunit alpha; AltName: Full=F-ATPase
            subunit alpha gi|113200893|gb|ABI32409.1| ATP synthase
            CF1 alpha subunit [Daucus carota]
          Length = 507

 Score =  909 bits (2349), Expect = 0.0
 Identities = 481/506 (95%), Positives = 486/506 (96%)
 Frame = +1

Query: 325  MVTIRADEISNIIRERIEQYNREVKIVNTGTVLQVGDGIARIHGLDEVMAGELVEFEEGT 504
            MVTIRADEIS IIRERIE+YNREVKIVNTGTVLQVGDGIARIHGLDEVMAGELVEF+EGT
Sbjct: 1    MVTIRADEISKIIRERIEEYNREVKIVNTGTVLQVGDGIARIHGLDEVMAGELVEFQEGT 60

Query: 505  VGIALNLESTNVGVVLMGDGLLIQEGSSVKATGRIAQIPVSEAFLGRVVNALAKPIDGRG 684
            VGIALNLESTNVGVVLMGDGLLIQEGSSVKATGRIAQIPVSEA+LGRVVNALAKPIDGRG
Sbjct: 61   VGIALNLESTNVGVVLMGDGLLIQEGSSVKATGRIAQIPVSEAYLGRVVNALAKPIDGRG 120

Query: 685  EISASEYRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVA 864
            EISASEYRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVA
Sbjct: 121  EISASEYRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVA 180

Query: 865  TDTILNQQGQNVICVYVAIGQKASSVAQVVTTFQERGAMEYTIVVAETADSPATLQYLAP 1044
            TDTILNQQGQNVICVYVAIGQKASSVAQVVT FQERGAMEYTIVVAETADSPATLQYLAP
Sbjct: 181  TDTILNQQGQNVICVYVAIGQKASSVAQVVTNFQERGAMEYTIVVAETADSPATLQYLAP 240

Query: 1045 YTGAALAEFFMYRERHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLE 1224
            YTGAALAEFFMYR+RHTLIIYDD SKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLE
Sbjct: 241  YTGAALAEFFMYRKRHTLIIYDDPSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLE 300

Query: 1225 RAAKLGSLLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINV 1404
            RAAKLGSLLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINV
Sbjct: 301  RAAKLGSLLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINV 360

Query: 1405 GISVSRVGSAAQIKAMKQVAGKLKXXXXXXXXXXXXXXXXSDLDKATQNQLARGQRLREL 1584
            GISVSRVGSAAQIKAMKQVAGKLK                SDLDKATQNQLARGQRLREL
Sbjct: 361  GISVSRVGSAAQIKAMKQVAGKLKLELAQFAELEAFAQFASDLDKATQNQLARGQRLREL 420

Query: 1585 LKQSQSAPLAVDEQIMTIYTGTNGYLDSLEIGQVRKFLVELRTYLKTNKPQFQEIISSTK 1764
            LKQSQSAPLAV+EQIMTIYTGTNGYLDSLEIGQVRKFLVELRTYLKTNKPQFQEIISSTK
Sbjct: 421  LKQSQSAPLAVEEQIMTIYTGTNGYLDSLEIGQVRKFLVELRTYLKTNKPQFQEIISSTK 480

Query: 1765 TFTEEAEALLKEAIQEQMERFILQEQ 1842
             FTEEAEALLKEAIQEQMERFILQEQ
Sbjct: 481  IFTEEAEALLKEAIQEQMERFILQEQ 506


>ref|YP_003330956.1| ATP synthase CF1 alpha subunit [Parthenium argentatum]
            gi|269924832|gb|ACZ52705.1| ATP synthase CF1 alpha
            subunit [Parthenium argentatum]
          Length = 508

 Score =  909 bits (2348), Expect = 0.0
 Identities = 478/507 (94%), Positives = 488/507 (96%)
 Frame = +1

Query: 325  MVTIRADEISNIIRERIEQYNREVKIVNTGTVLQVGDGIARIHGLDEVMAGELVEFEEGT 504
            MVTI+ADEISNIIRERIEQYNREVKIVNTGTVLQVGDGIARIHGLDEVMAGELVEF+EGT
Sbjct: 1    MVTIQADEISNIIRERIEQYNREVKIVNTGTVLQVGDGIARIHGLDEVMAGELVEFQEGT 60

Query: 505  VGIALNLESTNVGVVLMGDGLLIQEGSSVKATGRIAQIPVSEAFLGRVVNALAKPIDGRG 684
            VGIALNLESTNVGVVLMGDGLLIQEGSSVKATGRIAQIPVSEA+LGRV+NALAKPIDGRG
Sbjct: 61   VGIALNLESTNVGVVLMGDGLLIQEGSSVKATGRIAQIPVSEAYLGRVINALAKPIDGRG 120

Query: 685  EISASEYRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVA 864
            EIS+SEYRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVA
Sbjct: 121  EISSSEYRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVA 180

Query: 865  TDTILNQQGQNVICVYVAIGQKASSVAQVVTTFQERGAMEYTIVVAETADSPATLQYLAP 1044
            TDTILNQQGQNVICVYVAIGQKASSVAQVVTTFQERGAMEYTIVVAETADSPATLQYLAP
Sbjct: 181  TDTILNQQGQNVICVYVAIGQKASSVAQVVTTFQERGAMEYTIVVAETADSPATLQYLAP 240

Query: 1045 YTGAALAEFFMYRERHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLE 1224
            YTGAALAE+FMYRERHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLE
Sbjct: 241  YTGAALAEYFMYRERHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLE 300

Query: 1225 RAAKLGSLLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINV 1404
            RAAKL SLLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINV
Sbjct: 301  RAAKLSSLLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINV 360

Query: 1405 GISVSRVGSAAQIKAMKQVAGKLKXXXXXXXXXXXXXXXXSDLDKATQNQLARGQRLREL 1584
            GISVSRVGSAAQIKAMKQVAGKLK                SDLDKATQNQLARGQRLREL
Sbjct: 361  GISVSRVGSAAQIKAMKQVAGKLKLELAQFAELEAFAQFASDLDKATQNQLARGQRLREL 420

Query: 1585 LKQSQSAPLAVDEQIMTIYTGTNGYLDSLEIGQVRKFLVELRTYLKTNKPQFQEIISSTK 1764
            LKQSQSAPLAV+EQI+TIYTGTNGYLDSLEIGQVRKFLVELRTYLKTNKPQFQEIISSTK
Sbjct: 421  LKQSQSAPLAVEEQILTIYTGTNGYLDSLEIGQVRKFLVELRTYLKTNKPQFQEIISSTK 480

Query: 1765 TFTEEAEALLKEAIQEQMERFILQEQA 1845
             FTEEAEA+LKEAIQEQ ERF+LQEQA
Sbjct: 481  IFTEEAEAILKEAIQEQRERFLLQEQA 507


>ref|YP_004564366.1| ATP synthase CF1 alpha subunit (chloroplast) [Ageratina adenophora]
            gi|334089667|gb|AEG64550.1| ATP synthase CF1 alpha
            subunit (chloroplast) [Ageratina adenophora]
          Length = 508

 Score =  907 bits (2345), Expect = 0.0
 Identities = 477/507 (94%), Positives = 487/507 (96%)
 Frame = +1

Query: 325  MVTIRADEISNIIRERIEQYNREVKIVNTGTVLQVGDGIARIHGLDEVMAGELVEFEEGT 504
            MVTI+ADEISNIIRERIEQYNREVKIVNTGTVLQVGDGIARIHGLDEVMAGELVEF+EGT
Sbjct: 1    MVTIQADEISNIIRERIEQYNREVKIVNTGTVLQVGDGIARIHGLDEVMAGELVEFQEGT 60

Query: 505  VGIALNLESTNVGVVLMGDGLLIQEGSSVKATGRIAQIPVSEAFLGRVVNALAKPIDGRG 684
            +GIALNLESTNVGVVLMGDGLLIQEGSSVKATGRIAQIPVSEA+LGRV+NALAKPIDGRG
Sbjct: 61   IGIALNLESTNVGVVLMGDGLLIQEGSSVKATGRIAQIPVSEAYLGRVINALAKPIDGRG 120

Query: 685  EISASEYRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVA 864
            EIS+SEYRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVA
Sbjct: 121  EISSSEYRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVA 180

Query: 865  TDTILNQQGQNVICVYVAIGQKASSVAQVVTTFQERGAMEYTIVVAETADSPATLQYLAP 1044
            TDTILNQQGQNVICVYVAIGQKASSVAQVVTTFQERGAMEYTIVVAETADSPATLQYLAP
Sbjct: 181  TDTILNQQGQNVICVYVAIGQKASSVAQVVTTFQERGAMEYTIVVAETADSPATLQYLAP 240

Query: 1045 YTGAALAEFFMYRERHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLE 1224
            YTGAALAE+FMYRERHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLE
Sbjct: 241  YTGAALAEYFMYRERHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLE 300

Query: 1225 RAAKLGSLLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINV 1404
            RAAKL SLLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINV
Sbjct: 301  RAAKLSSLLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINV 360

Query: 1405 GISVSRVGSAAQIKAMKQVAGKLKXXXXXXXXXXXXXXXXSDLDKATQNQLARGQRLREL 1584
            GISVSRVGSAAQIKAMKQVAGKLK                SDLDKATQNQLARGQRLREL
Sbjct: 361  GISVSRVGSAAQIKAMKQVAGKLKLELAQFAELEAFAQFASDLDKATQNQLARGQRLREL 420

Query: 1585 LKQSQSAPLAVDEQIMTIYTGTNGYLDSLEIGQVRKFLVELRTYLKTNKPQFQEIISSTK 1764
            LKQSQSAPL V+EQI+TIYTGTNGYLDSLEIGQVRKFLVELRTYLKTNKPQFQEIISSTK
Sbjct: 421  LKQSQSAPLGVEEQILTIYTGTNGYLDSLEIGQVRKFLVELRTYLKTNKPQFQEIISSTK 480

Query: 1765 TFTEEAEALLKEAIQEQMERFILQEQA 1845
             FTEEAEA+LKEAIQEQ ERFILQEQA
Sbjct: 481  IFTEEAEAILKEAIQEQRERFILQEQA 507


>ref|YP_001837354.1| ATP synthase CF1 alpha subunit [Guizotia abyssinica]
            gi|179366250|gb|ACB86521.1| ATP synthase CF1 alpha
            subunit [Guizotia abyssinica]
          Length = 508

 Score =  906 bits (2342), Expect = 0.0
 Identities = 476/507 (93%), Positives = 487/507 (96%)
 Frame = +1

Query: 325  MVTIRADEISNIIRERIEQYNREVKIVNTGTVLQVGDGIARIHGLDEVMAGELVEFEEGT 504
            MVTI+ADEISNIIRERIEQYNREVKIVNTGTVLQVGDGIARIHGLDEVMAGELVEF+EGT
Sbjct: 1    MVTIQADEISNIIRERIEQYNREVKIVNTGTVLQVGDGIARIHGLDEVMAGELVEFQEGT 60

Query: 505  VGIALNLESTNVGVVLMGDGLLIQEGSSVKATGRIAQIPVSEAFLGRVVNALAKPIDGRG 684
            +GIALNLESTNVGVVLMGDGLLIQEGSSVKATGRIAQIPVSEA+LGRV+NALAKPIDGRG
Sbjct: 61   IGIALNLESTNVGVVLMGDGLLIQEGSSVKATGRIAQIPVSEAYLGRVINALAKPIDGRG 120

Query: 685  EISASEYRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVA 864
            EI +SEYRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVA
Sbjct: 121  EILSSEYRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVA 180

Query: 865  TDTILNQQGQNVICVYVAIGQKASSVAQVVTTFQERGAMEYTIVVAETADSPATLQYLAP 1044
            TDTILNQQGQNVICVYVAIGQKASSVAQVVTTFQERGAMEYTIVVAETADSPATLQYLAP
Sbjct: 181  TDTILNQQGQNVICVYVAIGQKASSVAQVVTTFQERGAMEYTIVVAETADSPATLQYLAP 240

Query: 1045 YTGAALAEFFMYRERHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLE 1224
            YTGAALAE+FMYRERHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLE
Sbjct: 241  YTGAALAEYFMYRERHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLE 300

Query: 1225 RAAKLGSLLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINV 1404
            RAAKL SLLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINV
Sbjct: 301  RAAKLSSLLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINV 360

Query: 1405 GISVSRVGSAAQIKAMKQVAGKLKXXXXXXXXXXXXXXXXSDLDKATQNQLARGQRLREL 1584
            GISVSRVGSAAQIKAMKQVAGKLK                SDLDKATQNQLARGQRLREL
Sbjct: 361  GISVSRVGSAAQIKAMKQVAGKLKLELAQFAELEAFAQFASDLDKATQNQLARGQRLREL 420

Query: 1585 LKQSQSAPLAVDEQIMTIYTGTNGYLDSLEIGQVRKFLVELRTYLKTNKPQFQEIISSTK 1764
            LKQSQSAPLAV+EQ++TIYTGTNGYLDSLEIGQVRKFLVELRTYLKTNKPQFQEIISSTK
Sbjct: 421  LKQSQSAPLAVEEQVLTIYTGTNGYLDSLEIGQVRKFLVELRTYLKTNKPQFQEIISSTK 480

Query: 1765 TFTEEAEALLKEAIQEQMERFILQEQA 1845
             FTEEAEA+LKEAIQEQ ERFILQEQA
Sbjct: 481  IFTEEAEAILKEAIQEQRERFILQEQA 507