BLASTX nr result
ID: Bupleurum21_contig00019002
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Bupleurum21_contig00019002 (621 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003615596.1| Zinc finger MYM-type protein [Medicago trunc... 176 4e-42 ref|XP_002319808.1| predicted protein [Populus trichocarpa] gi|2... 166 4e-39 gb|AAF82236.1|AC069143_12 Contains similarity to a transposable ... 156 2e-36 ref|NP_173360.1| TTF-type zinc finger protein with HAT dimerizat... 156 2e-36 ref|XP_002489083.1| hypothetical protein SORBIDRAFT_0118s002010 ... 154 9e-36 >ref|XP_003615596.1| Zinc finger MYM-type protein [Medicago truncatula] gi|355516931|gb|AES98554.1| Zinc finger MYM-type protein [Medicago truncatula] Length = 892 Score = 176 bits (445), Expect = 4e-42 Identities = 85/161 (52%), Positives = 103/161 (63%), Gaps = 1/161 (0%) Frame = -3 Query: 481 NLDEFPIDPGLRKEIHEYNANIREIVRRTYLQRGPFQPKNHEFPWTLIGNQKRRFISTWF 302 NL+E P DPG R ++ Y+ N +EI+RR YLQ+GP QP H FP IGN RRF +WF Sbjct: 137 NLEELPSDPGKRPKMSTYHPNDQEIIRRAYLQKGPCQPNQHNFPQRKIGNSMRRFCPSWF 196 Query: 301 NDYEPWLEYSITKDAAFCLPCYLFKPVHGNQGGGDSFSREGFRNWKKKEKFDKHVG-DHS 125 N++ WLEYSI KDAAFCL CYLF+P G Q GGD+F EGF +W KK HVG + Sbjct: 197 NEFGNWLEYSIEKDAAFCLCCYLFRPDFGKQAGGDTFITEGFTSWNKKTTLSSHVGAGPN 256 Query: 124 SNHNKCMRACEDLMHHRQHIDVCLSNHSEQNRIDYRVRLIA 2 S HN + C DLM QHI+ +S HS+ R YR RL A Sbjct: 257 SAHNIAWKKCGDLMKQDQHIEGLMSKHSQTTRNLYRRRLTA 297 >ref|XP_002319808.1| predicted protein [Populus trichocarpa] gi|222858184|gb|EEE95731.1| predicted protein [Populus trichocarpa] Length = 788 Score = 166 bits (419), Expect = 4e-39 Identities = 85/164 (51%), Positives = 105/164 (64%), Gaps = 2/164 (1%) Frame = -3 Query: 487 EANLDEFPIDPGLRKEIHEYNANIREIVRRTYLQRGPFQPKNHEFPWTLIGNQK--RRFI 314 E N D DPGLR+ I+EY+ N R+ +RR YLQ+GP QP + +FP GN RRF Sbjct: 35 EINPDTLLADPGLRRPIYEYHINDRDAIRRAYLQKGPCQPSHCDFPQKQFGNISTLRRFN 94 Query: 313 STWFNDYEPWLEYSITKDAAFCLPCYLFKPVHGNQGGGDSFSREGFRNWKKKEKFDKHVG 134 WF Y WLEYSI KDAAFCL CYLFK ++GG DSF EGF NWKKKE+FD H+G Sbjct: 95 PAWFGAYPTWLEYSIAKDAAFCLYCYLFK----SKGGVDSFVGEGFSNWKKKERFDLHIG 150 Query: 133 DHSSNHNKCMRACEDLMHHRQHIDVCLSNHSEQNRIDYRVRLIA 2 +S HN CE+LM+ +Q I LS + +++ DYR RL A Sbjct: 151 KSNSCHNVARIKCENLMNEKQSIMTLLSEQTVKSQSDYRTRLNA 194 >gb|AAF82236.1|AC069143_12 Contains similarity to a transposable element Tip100 protein for transposase from Ipomoea purpurea gb|4063769 and is a member of the transmembrane 4 family PF|00335 [Arabidopsis thaliana] Length = 811 Score = 156 bits (395), Expect = 2e-36 Identities = 80/163 (49%), Positives = 99/163 (60%), Gaps = 1/163 (0%) Frame = -3 Query: 487 EANLDEFPIDPGLRKEIHEYNANIREIVRRTYLQRGPFQPKNHEFPWTLIGNQKRRFIST 308 + NL+E P DP RK I Y+ N R+ VRR YL RGP QP+ H+F IG RRF Sbjct: 56 DINLNELPSDPAKRKSILSYHPNQRDEVRREYLIRGPCQPRGHKFKQIAIGKVLRRFNPK 115 Query: 307 WFNDYEPWLEYSITKDAAFCLPCYLFKPVHGNQGGGDSFSREGFRNWKKKEKFDKHVG-D 131 WF+ Y WLEYS+ K+ AFCL CYLF+ GNQGG DSF GF +W K ++ D+HVG D Sbjct: 116 WFDLYGDWLEYSVEKEKAFCLYCYLFRDQTGNQGGSDSFLSTGFCSWNKADRLDQHVGLD 175 Query: 130 HSSNHNKCMRACEDLMHHRQHIDVCLSNHSEQNRIDYRVRLIA 2 +S HN R CEDLM Q I L ++ + DYR+ L A Sbjct: 176 VNSFHNNAKRKCEDLMRQGQSIKHALHKQTDVVKNDYRIWLNA 218 >ref|NP_173360.1| TTF-type zinc finger protein with HAT dimerization domain [Arabidopsis thaliana] gi|332191703|gb|AEE29824.1| TTF-type zinc finger protein with HAT dimerization domain [Arabidopsis thaliana] Length = 769 Score = 156 bits (395), Expect = 2e-36 Identities = 80/163 (49%), Positives = 99/163 (60%), Gaps = 1/163 (0%) Frame = -3 Query: 487 EANLDEFPIDPGLRKEIHEYNANIREIVRRTYLQRGPFQPKNHEFPWTLIGNQKRRFIST 308 + NL+E P DP RK I Y+ N R+ VRR YL RGP QP+ H+F IG RRF Sbjct: 14 DINLNELPSDPAKRKSILSYHPNQRDEVRREYLIRGPCQPRGHKFKQIAIGKVLRRFNPK 73 Query: 307 WFNDYEPWLEYSITKDAAFCLPCYLFKPVHGNQGGGDSFSREGFRNWKKKEKFDKHVG-D 131 WF+ Y WLEYS+ K+ AFCL CYLF+ GNQGG DSF GF +W K ++ D+HVG D Sbjct: 74 WFDLYGDWLEYSVEKEKAFCLYCYLFRDQTGNQGGSDSFLSTGFCSWNKADRLDQHVGLD 133 Query: 130 HSSNHNKCMRACEDLMHHRQHIDVCLSNHSEQNRIDYRVRLIA 2 +S HN R CEDLM Q I L ++ + DYR+ L A Sbjct: 134 VNSFHNNAKRKCEDLMRQGQSIKHALHKQTDVVKNDYRIWLNA 176 >ref|XP_002489083.1| hypothetical protein SORBIDRAFT_0118s002010 [Sorghum bicolor] gi|241947003|gb|EES20148.1| hypothetical protein SORBIDRAFT_0118s002010 [Sorghum bicolor] Length = 762 Score = 154 bits (390), Expect = 9e-36 Identities = 81/203 (39%), Positives = 112/203 (55%), Gaps = 8/203 (3%) Frame = -3 Query: 592 MERYFGRLRNKPKTDNIGXXXXXXXXXXXXSVTNNEANL--------DEFPIDPGLRKEI 437 ME+YF R +P + NN NL DE DPGLRK+I Sbjct: 1 MEKYFKRKAPEPDS------------------ANNARNLCLDDINWEDEIKYDPGLRKQI 42 Query: 436 HEYNANIREIVRRTYLQRGPFQPKNHEFPWTLIGNQKRRFISTWFNDYEPWLEYSITKDA 257 EY+ N+RE+VRR YL++GP QP+ FP IG RRFI WF+++ WLEYS +KD Sbjct: 43 DEYHPNLRELVRRKYLEKGPCQPRTFSFPVKNIGGGPRRFIPEWFDEFGNWLEYSESKDR 102 Query: 256 AFCLPCYLFKPVHGNQGGGDSFSREGFRNWKKKEKFDKHVGDHSSNHNKCMRACEDLMHH 77 A+C C+LF+ GG ++F + G+ + +K++ HVGD +H M+ C+DLM Sbjct: 103 AYCFLCFLFR--EKKDGGYEAFVKNGWNGFHRKQRLKDHVGDVGGSHYLAMKKCDDLMQT 160 Query: 76 RQHIDVCLSNHSEQNRIDYRVRL 8 RQHIDV +E + DY +RL Sbjct: 161 RQHIDVAFRGVNESAKRDYMIRL 183