BLASTX nr result

ID: Bupleurum21_contig00019002 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00019002
         (621 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003615596.1| Zinc finger MYM-type protein [Medicago trunc...   176   4e-42
ref|XP_002319808.1| predicted protein [Populus trichocarpa] gi|2...   166   4e-39
gb|AAF82236.1|AC069143_12 Contains similarity to a transposable ...   156   2e-36
ref|NP_173360.1| TTF-type zinc finger protein with HAT dimerizat...   156   2e-36
ref|XP_002489083.1| hypothetical protein SORBIDRAFT_0118s002010 ...   154   9e-36

>ref|XP_003615596.1| Zinc finger MYM-type protein [Medicago truncatula]
           gi|355516931|gb|AES98554.1| Zinc finger MYM-type protein
           [Medicago truncatula]
          Length = 892

 Score =  176 bits (445), Expect = 4e-42
 Identities = 85/161 (52%), Positives = 103/161 (63%), Gaps = 1/161 (0%)
 Frame = -3

Query: 481 NLDEFPIDPGLRKEIHEYNANIREIVRRTYLQRGPFQPKNHEFPWTLIGNQKRRFISTWF 302
           NL+E P DPG R ++  Y+ N +EI+RR YLQ+GP QP  H FP   IGN  RRF  +WF
Sbjct: 137 NLEELPSDPGKRPKMSTYHPNDQEIIRRAYLQKGPCQPNQHNFPQRKIGNSMRRFCPSWF 196

Query: 301 NDYEPWLEYSITKDAAFCLPCYLFKPVHGNQGGGDSFSREGFRNWKKKEKFDKHVG-DHS 125
           N++  WLEYSI KDAAFCL CYLF+P  G Q GGD+F  EGF +W KK     HVG   +
Sbjct: 197 NEFGNWLEYSIEKDAAFCLCCYLFRPDFGKQAGGDTFITEGFTSWNKKTTLSSHVGAGPN 256

Query: 124 SNHNKCMRACEDLMHHRQHIDVCLSNHSEQNRIDYRVRLIA 2
           S HN   + C DLM   QHI+  +S HS+  R  YR RL A
Sbjct: 257 SAHNIAWKKCGDLMKQDQHIEGLMSKHSQTTRNLYRRRLTA 297


>ref|XP_002319808.1| predicted protein [Populus trichocarpa] gi|222858184|gb|EEE95731.1|
           predicted protein [Populus trichocarpa]
          Length = 788

 Score =  166 bits (419), Expect = 4e-39
 Identities = 85/164 (51%), Positives = 105/164 (64%), Gaps = 2/164 (1%)
 Frame = -3

Query: 487 EANLDEFPIDPGLRKEIHEYNANIREIVRRTYLQRGPFQPKNHEFPWTLIGNQK--RRFI 314
           E N D    DPGLR+ I+EY+ N R+ +RR YLQ+GP QP + +FP    GN    RRF 
Sbjct: 35  EINPDTLLADPGLRRPIYEYHINDRDAIRRAYLQKGPCQPSHCDFPQKQFGNISTLRRFN 94

Query: 313 STWFNDYEPWLEYSITKDAAFCLPCYLFKPVHGNQGGGDSFSREGFRNWKKKEKFDKHVG 134
             WF  Y  WLEYSI KDAAFCL CYLFK    ++GG DSF  EGF NWKKKE+FD H+G
Sbjct: 95  PAWFGAYPTWLEYSIAKDAAFCLYCYLFK----SKGGVDSFVGEGFSNWKKKERFDLHIG 150

Query: 133 DHSSNHNKCMRACEDLMHHRQHIDVCLSNHSEQNRIDYRVRLIA 2
             +S HN     CE+LM+ +Q I   LS  + +++ DYR RL A
Sbjct: 151 KSNSCHNVARIKCENLMNEKQSIMTLLSEQTVKSQSDYRTRLNA 194


>gb|AAF82236.1|AC069143_12 Contains similarity to a transposable element Tip100 protein for
           transposase from Ipomoea purpurea gb|4063769 and is a
           member of the transmembrane 4 family PF|00335
           [Arabidopsis thaliana]
          Length = 811

 Score =  156 bits (395), Expect = 2e-36
 Identities = 80/163 (49%), Positives = 99/163 (60%), Gaps = 1/163 (0%)
 Frame = -3

Query: 487 EANLDEFPIDPGLRKEIHEYNANIREIVRRTYLQRGPFQPKNHEFPWTLIGNQKRRFIST 308
           + NL+E P DP  RK I  Y+ N R+ VRR YL RGP QP+ H+F    IG   RRF   
Sbjct: 56  DINLNELPSDPAKRKSILSYHPNQRDEVRREYLIRGPCQPRGHKFKQIAIGKVLRRFNPK 115

Query: 307 WFNDYEPWLEYSITKDAAFCLPCYLFKPVHGNQGGGDSFSREGFRNWKKKEKFDKHVG-D 131
           WF+ Y  WLEYS+ K+ AFCL CYLF+   GNQGG DSF   GF +W K ++ D+HVG D
Sbjct: 116 WFDLYGDWLEYSVEKEKAFCLYCYLFRDQTGNQGGSDSFLSTGFCSWNKADRLDQHVGLD 175

Query: 130 HSSNHNKCMRACEDLMHHRQHIDVCLSNHSEQNRIDYRVRLIA 2
            +S HN   R CEDLM   Q I   L   ++  + DYR+ L A
Sbjct: 176 VNSFHNNAKRKCEDLMRQGQSIKHALHKQTDVVKNDYRIWLNA 218


>ref|NP_173360.1| TTF-type zinc finger protein with HAT dimerization domain
           [Arabidopsis thaliana] gi|332191703|gb|AEE29824.1|
           TTF-type zinc finger protein with HAT dimerization
           domain [Arabidopsis thaliana]
          Length = 769

 Score =  156 bits (395), Expect = 2e-36
 Identities = 80/163 (49%), Positives = 99/163 (60%), Gaps = 1/163 (0%)
 Frame = -3

Query: 487 EANLDEFPIDPGLRKEIHEYNANIREIVRRTYLQRGPFQPKNHEFPWTLIGNQKRRFIST 308
           + NL+E P DP  RK I  Y+ N R+ VRR YL RGP QP+ H+F    IG   RRF   
Sbjct: 14  DINLNELPSDPAKRKSILSYHPNQRDEVRREYLIRGPCQPRGHKFKQIAIGKVLRRFNPK 73

Query: 307 WFNDYEPWLEYSITKDAAFCLPCYLFKPVHGNQGGGDSFSREGFRNWKKKEKFDKHVG-D 131
           WF+ Y  WLEYS+ K+ AFCL CYLF+   GNQGG DSF   GF +W K ++ D+HVG D
Sbjct: 74  WFDLYGDWLEYSVEKEKAFCLYCYLFRDQTGNQGGSDSFLSTGFCSWNKADRLDQHVGLD 133

Query: 130 HSSNHNKCMRACEDLMHHRQHIDVCLSNHSEQNRIDYRVRLIA 2
            +S HN   R CEDLM   Q I   L   ++  + DYR+ L A
Sbjct: 134 VNSFHNNAKRKCEDLMRQGQSIKHALHKQTDVVKNDYRIWLNA 176


>ref|XP_002489083.1| hypothetical protein SORBIDRAFT_0118s002010 [Sorghum bicolor]
           gi|241947003|gb|EES20148.1| hypothetical protein
           SORBIDRAFT_0118s002010 [Sorghum bicolor]
          Length = 762

 Score =  154 bits (390), Expect = 9e-36
 Identities = 81/203 (39%), Positives = 112/203 (55%), Gaps = 8/203 (3%)
 Frame = -3

Query: 592 MERYFGRLRNKPKTDNIGXXXXXXXXXXXXSVTNNEANL--------DEFPIDPGLRKEI 437
           ME+YF R   +P +                   NN  NL        DE   DPGLRK+I
Sbjct: 1   MEKYFKRKAPEPDS------------------ANNARNLCLDDINWEDEIKYDPGLRKQI 42

Query: 436 HEYNANIREIVRRTYLQRGPFQPKNHEFPWTLIGNQKRRFISTWFNDYEPWLEYSITKDA 257
            EY+ N+RE+VRR YL++GP QP+   FP   IG   RRFI  WF+++  WLEYS +KD 
Sbjct: 43  DEYHPNLRELVRRKYLEKGPCQPRTFSFPVKNIGGGPRRFIPEWFDEFGNWLEYSESKDR 102

Query: 256 AFCLPCYLFKPVHGNQGGGDSFSREGFRNWKKKEKFDKHVGDHSSNHNKCMRACEDLMHH 77
           A+C  C+LF+      GG ++F + G+  + +K++   HVGD   +H   M+ C+DLM  
Sbjct: 103 AYCFLCFLFR--EKKDGGYEAFVKNGWNGFHRKQRLKDHVGDVGGSHYLAMKKCDDLMQT 160

Query: 76  RQHIDVCLSNHSEQNRIDYRVRL 8
           RQHIDV     +E  + DY +RL
Sbjct: 161 RQHIDVAFRGVNESAKRDYMIRL 183


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