BLASTX nr result

ID: Bupleurum21_contig00018980 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00018980
         (373 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002312839.1| predicted protein [Populus trichocarpa] gi|1...    67   1e-09
ref|XP_003553299.1| PREDICTED: ras-related protein RABB1b-like [...    67   2e-09
ref|NP_001078499.1| GTP-binding protein GB2 [Arabidopsis thalian...    66   3e-09
ref|NP_195311.1| GTP-binding protein GB2 [Arabidopsis thaliana] ...    66   3e-09
ref|XP_002867050.1| GTP-binding 2 [Arabidopsis lyrata subsp. lyr...    66   3e-09

>ref|XP_002312839.1| predicted protein [Populus trichocarpa] gi|118481778|gb|ABK92828.1|
           unknown [Populus trichocarpa]
           gi|222849247|gb|EEE86794.1| predicted protein [Populus
           trichocarpa]
          Length = 211

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 30/48 (62%), Positives = 38/48 (79%)
 Frame = -1

Query: 373 AARILKKIEEGAYDVSNESSGIKLGYQRAPGAPGARDASVSRNAGCCS 230
           A +IL+ I+EG +DVSNESSGIK+GY R  GA GARD +V++  GCCS
Sbjct: 164 AGKILQNIQEGVFDVSNESSGIKVGYGRPQGASGARDGTVAQRGGCCS 211


>ref|XP_003553299.1| PREDICTED: ras-related protein RABB1b-like [Glycine max]
          Length = 211

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 30/48 (62%), Positives = 36/48 (75%)
 Frame = -1

Query: 373 AARILKKIEEGAYDVSNESSGIKLGYQRAPGAPGARDASVSRNAGCCS 230
           A +IL+ I+EG +DVSNES GIK+GY R  G PGARD +VS   GCCS
Sbjct: 164 AGKILQNIQEGVFDVSNESFGIKVGYGRPQGQPGARDGTVSARGGCCS 211


>ref|NP_001078499.1| GTP-binding protein GB2 [Arabidopsis thaliana]
           gi|332661182|gb|AEE86582.1| GTP-binding protein GB2
           [Arabidopsis thaliana]
          Length = 165

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 28/47 (59%), Positives = 37/47 (78%)
 Frame = -1

Query: 373 AARILKKIEEGAYDVSNESSGIKLGYQRAPGAPGARDASVSRNAGCC 233
           AA+IL+ I++G +DVSNESSGIK+GY R  GA G RD ++S+  GCC
Sbjct: 118 AAKILQNIQDGVFDVSNESSGIKIGYGRTQGAAGGRDGTISQGGGCC 164


>ref|NP_195311.1| GTP-binding protein GB2 [Arabidopsis thaliana]
           gi|75281787|sp|Q38922.1|RAB1B_ARATH RecName:
           Full=Ras-related protein RABB1b; Short=AtRABB1b;
           AltName: Full=Ras-related protein GB2; Short=AtGB2;
           AltName: Full=Ras-related protein Rab2C; Short=AtRab2C
           gi|1184983|gb|AAA87883.1| ATGB2 [Arabidopsis thaliana]
           gi|3805852|emb|CAA21472.1| GTP-binding protein GB2
           [Arabidopsis thaliana] gi|7270538|emb|CAB81495.1|
           GTP-binding protein GB2 [Arabidopsis thaliana]
           gi|17529056|gb|AAL38738.1| putative GTP-binding protein
           GB2 [Arabidopsis thaliana] gi|21436445|gb|AAM51423.1|
           putative GTP-binding protein GB2 [Arabidopsis thaliana]
           gi|21553875|gb|AAM62968.1| GTP-binding protein GB2
           [Arabidopsis thaliana] gi|332661181|gb|AEE86581.1|
           GTP-binding protein GB2 [Arabidopsis thaliana]
          Length = 211

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 28/47 (59%), Positives = 37/47 (78%)
 Frame = -1

Query: 373 AARILKKIEEGAYDVSNESSGIKLGYQRAPGAPGARDASVSRNAGCC 233
           AA+IL+ I++G +DVSNESSGIK+GY R  GA G RD ++S+  GCC
Sbjct: 164 AAKILQNIQDGVFDVSNESSGIKIGYGRTQGAAGGRDGTISQGGGCC 210


>ref|XP_002867050.1| GTP-binding 2 [Arabidopsis lyrata subsp. lyrata]
           gi|297312886|gb|EFH43309.1| GTP-binding 2 [Arabidopsis
           lyrata subsp. lyrata]
          Length = 211

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 28/47 (59%), Positives = 37/47 (78%)
 Frame = -1

Query: 373 AARILKKIEEGAYDVSNESSGIKLGYQRAPGAPGARDASVSRNAGCC 233
           AA+IL+ I++G +DVSNESSGIK+GY R  GA G RD ++S+  GCC
Sbjct: 164 AAKILQNIQDGVFDVSNESSGIKVGYGRTQGAAGGRDGTISQGGGCC 210


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