BLASTX nr result

ID: Bupleurum21_contig00018963 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00018963
         (1069 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003524456.1| PREDICTED: UDP-N-acetylmuramoyl-L-alanyl-D-g...   308   1e-81
ref|XP_003532812.1| PREDICTED: UDP-N-acetylmuramoyl-L-alanyl-D-g...   304   2e-80
gb|AEW69821.1| Hop-interacting protein THI138 [Solanum lycopersi...   186   9e-45
ref|XP_004143900.1| PREDICTED: UDP-N-acetylmuramoyl-L-alanyl-D-g...   185   1e-44
ref|XP_002270348.2| PREDICTED: UDP-N-acetylmuramoyl-L-alanyl-D-g...   184   3e-44

>ref|XP_003524456.1| PREDICTED: UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,
           6-diaminopimelate ligase-like [Glycine max]
          Length = 748

 Score =  308 bits (789), Expect = 1e-81
 Identities = 170/286 (59%), Positives = 194/286 (67%)
 Frame = -2

Query: 861 PFAIGPDGKFYPTPSDNDPPEAPEDTMHGVNKFTQISRQASRARKIADEEYKKDQSIFLN 682
           P AIGPDGKFYP+P+D+DPPEA ED+ HG + F QI RQA RAR+I +E+YK +QS +L 
Sbjct: 52  PRAIGPDGKFYPSPADDDPPEADEDSSHGFSTFQQIQRQAQRARQIEEEDYKNNQSTYLA 111

Query: 681 AIADVEDAPDNPSLVDENDAGDDLFGEIDKAIALKRKEFVKQGLLKPNPKKEKGKXXXXX 502
           AIADVEDAPDN      + + DDLFGEIDKA+ALKRKEFV QGLL+PNP K+        
Sbjct: 112 AIADVEDAPDNAPF---DSSEDDLFGEIDKALALKRKEFVSQGLLQPNPPKQDQLPVAAV 168

Query: 501 XXXXXXXXXXXXXXXXLQGLAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 322
                           LQGL G                                      
Sbjct: 169 DELQPDELGDLEEIERLQGLTGDGNGSSTDSPFEFDFDSYGKS----------------- 211

Query: 321 XXSKARIVEPKFRMTLAELLDESKVVPVSVYGNIEIEITGIQHDSRMVESGDLFVCCVGK 142
              K RIVE KF+MTLAELLDESKVVPVSV G++EIEITGIQHDSR+V SGDLFVCCVG+
Sbjct: 212 ---KVRIVEGKFKMTLAELLDESKVVPVSVSGDLEIEITGIQHDSRIVSSGDLFVCCVGR 268

Query: 141 KTDGHMYLSEADKRGAVAVVASKEIDIEDTLGCKALVIVEDTSAVI 4
           KTDGH++LSEADKRGAVAVVASKEIDIEDTLGCKALVIVEDT+AV+
Sbjct: 269 KTDGHLFLSEADKRGAVAVVASKEIDIEDTLGCKALVIVEDTNAVL 314


>ref|XP_003532812.1| PREDICTED: UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,
           6-diaminopimelate ligase-like [Glycine max]
          Length = 750

 Score =  304 bits (779), Expect = 2e-80
 Identities = 168/286 (58%), Positives = 193/286 (67%)
 Frame = -2

Query: 861 PFAIGPDGKFYPTPSDNDPPEAPEDTMHGVNKFTQISRQASRARKIADEEYKKDQSIFLN 682
           P AIGPDGKFYP+P+D+DPPEA ED+ HG + F QI RQA RAR+I +++YKK+QS +L 
Sbjct: 51  PRAIGPDGKFYPSPADDDPPEADEDSSHGFSTFQQIQRQAERARQIEEDDYKKNQSTYLA 110

Query: 681 AIADVEDAPDNPSLVDENDAGDDLFGEIDKAIALKRKEFVKQGLLKPNPKKEKGKXXXXX 502
           AIADVEDAPDN      + + DDLFGEIDKA+ALKRKEFV QGLL+PNP K+        
Sbjct: 111 AIADVEDAPDNAPF---DSSEDDLFGEIDKALALKRKEFVSQGLLQPNPPKQDPLPVAAV 167

Query: 501 XXXXXXXXXXXXXXXXLQGLAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 322
                           LQGL                                        
Sbjct: 168 DELQPDELGDLAEIERLQGLTADGNGNISNSTESPFEFDFDSYGKT-------------- 213

Query: 321 XXSKARIVEPKFRMTLAELLDESKVVPVSVYGNIEIEITGIQHDSRMVESGDLFVCCVGK 142
              K RIVE KF+M+LAELLDESKVVPVSV G++EIEITGIQHDSR+V SGDLFVCCVG 
Sbjct: 214 ---KVRIVEGKFKMSLAELLDESKVVPVSVSGDLEIEITGIQHDSRIVSSGDLFVCCVGS 270

Query: 141 KTDGHMYLSEADKRGAVAVVASKEIDIEDTLGCKALVIVEDTSAVI 4
           KTDGH++LSEADKRGAVAVVASKEIDIEDTLGCKALVIVEDT+AV+
Sbjct: 271 KTDGHLFLSEADKRGAVAVVASKEIDIEDTLGCKALVIVEDTNAVL 316


>gb|AEW69821.1| Hop-interacting protein THI138 [Solanum lycopersicum]
          Length = 771

 Score =  186 bits (472), Expect = 9e-45
 Identities = 98/152 (64%), Positives = 115/152 (75%), Gaps = 4/152 (2%)
 Frame = -2

Query: 972 LSPPVCLPLKSSFHYNF----LKPHCHNFSIYRQRFNLSLTPFAIGPDGKFYPTPSDNDP 805
           LSPP   P  S  H+       KP      +  +      T  AIG DGK+YPTPSD+DP
Sbjct: 6   LSPP---PFPSLLHHTLPPLQFKPFISLHHLRLKHPTTLTTVSAIGADGKYYPTPSDDDP 62

Query: 804 PEAPEDTMHGVNKFTQISRQASRARKIADEEYKKDQSIFLNAIADVEDAPDNPSLVDEND 625
           PEAPED+MHGVNKF QI RQA++ARK  +E +KK+QSIF+NA+ADVEDAPDNP LV+++D
Sbjct: 63  PEAPEDSMHGVNKFQQIQRQAAKARKQQEELFKKEQSIFVNALADVEDAPDNP-LVNDSD 121

Query: 624 AGDDLFGEIDKAIALKRKEFVKQGLLKPNPKK 529
           +GDDLFGEIDKAIALKRKEFVKQGLLKPNPKK
Sbjct: 122 SGDDLFGEIDKAIALKRKEFVKQGLLKPNPKK 153



 Score =  185 bits (469), Expect = 2e-44
 Identities = 90/104 (86%), Positives = 101/104 (97%)
 Frame = -2

Query: 312 KARIVEPKFRMTLAELLDESKVVPVSVYGNIEIEITGIQHDSRMVESGDLFVCCVGKKTD 133
           K RI EPKFRM+LAELLDES+VVPVSVYG++E+EI+GIQHDSR+VESGDLFVCCVG KTD
Sbjct: 228 KPRIAEPKFRMSLAELLDESRVVPVSVYGDLEVEISGIQHDSRLVESGDLFVCCVGMKTD 287

Query: 132 GHMYLSEADKRGAVAVVASKEIDIEDTLGCKALVIVEDTSAVIA 1
           GH+YLSEADKRGAVAVVASKEIDIE+TLGCKALVIVEDT+AV+A
Sbjct: 288 GHLYLSEADKRGAVAVVASKEIDIEETLGCKALVIVEDTNAVLA 331


>ref|XP_004143900.1| PREDICTED: UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,
           6-diaminopimelate ligase-like [Cucumis sativus]
           gi|449495779|ref|XP_004159942.1| PREDICTED:
           UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,
           6-diaminopimelate ligase-like [Cucumis sativus]
          Length = 779

 Score =  185 bits (470), Expect = 1e-44
 Identities = 92/147 (62%), Positives = 111/147 (75%)
 Frame = -2

Query: 963 PVCLPLKSSFHYNFLKPHCHNFSIYRQRFNLSLTPFAIGPDGKFYPTPSDNDPPEAPEDT 784
           P  L L    ++ F++P  H   +   R      P AIGPDGKFYP P+D+DPPEAPED+
Sbjct: 9   PFPLILSPRSNFPFIRPQFHRQYLPAIRILRPSVPSAIGPDGKFYPDPADDDPPEAPEDS 68

Query: 783 MHGVNKFTQISRQASRARKIADEEYKKDQSIFLNAIADVEDAPDNPSLVDENDAGDDLFG 604
            HGV+KF QI RQA+RARKI +E++KK QS +L+AIADVEDAP+N   ++   +GDDLFG
Sbjct: 69  GHGVSKFQQIYRQAARARKIQEEDFKKHQSTYLSAIADVEDAPENAEYLNSESSGDDLFG 128

Query: 603 EIDKAIALKRKEFVKQGLLKPNPKKEK 523
           EIDKAIALKRKEFVKQGLLKPNPKKEK
Sbjct: 129 EIDKAIALKRKEFVKQGLLKPNPKKEK 155



 Score =  183 bits (464), Expect = 7e-44
 Identities = 88/103 (85%), Positives = 102/103 (99%)
 Frame = -2

Query: 312 KARIVEPKFRMTLAELLDESKVVPVSVYGNIEIEITGIQHDSRMVESGDLFVCCVGKKTD 133
           KARIVEPKF+MTLAELLDESKVVPVSV+GN+EIEITGIQHDSR+V +GDLFVCCVG++TD
Sbjct: 236 KARIVEPKFKMTLAELLDESKVVPVSVFGNLEIEITGIQHDSRVVTAGDLFVCCVGRETD 295

Query: 132 GHMYLSEADKRGAVAVVASKEIDIEDTLGCKALVIVEDTSAVI 4
           GH+YL+EADKRGAVAVVASKEIDIE+TLGCKALV+VEDT++V+
Sbjct: 296 GHLYLTEADKRGAVAVVASKEIDIEETLGCKALVMVEDTNSVL 338


>ref|XP_002270348.2| PREDICTED: UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,
           6-diaminopimelate ligase-like [Vitis vinifera]
          Length = 774

 Score =  184 bits (467), Expect = 3e-44
 Identities = 90/101 (89%), Positives = 99/101 (98%)
 Frame = -2

Query: 306 RIVEPKFRMTLAELLDESKVVPVSVYGNIEIEITGIQHDSRMVESGDLFVCCVGKKTDGH 127
           RIVEPKFRM+LAELLDESKVVPVSVYG++E+EITGIQHDSR+V SGDLFVCCVG+KTDGH
Sbjct: 233 RIVEPKFRMSLAELLDESKVVPVSVYGDLEVEITGIQHDSRVVSSGDLFVCCVGRKTDGH 292

Query: 126 MYLSEADKRGAVAVVASKEIDIEDTLGCKALVIVEDTSAVI 4
           +YLSEADKRGAVAVVASKEIDIE+TLGCKALVIVEDTS V+
Sbjct: 293 LYLSEADKRGAVAVVASKEIDIEETLGCKALVIVEDTSLVL 333



 Score =  172 bits (436), Expect = 1e-40
 Identities = 93/156 (59%), Positives = 106/156 (67%), Gaps = 3/156 (1%)
 Frame = -2

Query: 984 TIFSLSPPVCLPLKSSFHYNFLKPHCHNFSIYRQRFNLSL---TPFAIGPDGKFYPTPSD 814
           T FSL+ P   P     H   LKP    F      F L     +P  +   G F P P+D
Sbjct: 4   TFFSLTTPFMYP-----HSLCLKPSISQFKSLHGFFPLHRRLRSPAVVVSAGNFDPNPAD 58

Query: 813 NDPPEAPEDTMHGVNKFTQISRQASRARKIADEEYKKDQSIFLNAIADVEDAPDNPSLVD 634
           +DPPEAPED+ HG+ KF QI RQA+RARK  +E++KKDQS FLNAIADVEDAPDN   +D
Sbjct: 59  DDPPEAPEDSAHGLFKFQQIQRQAARARKREEEQFKKDQSTFLNAIADVEDAPDNVDSID 118

Query: 633 ENDAGDDLFGEIDKAIALKRKEFVKQGLLKPNPKKE 526
              AGDDLFGEIDKAIA+KRKEFVKQGLLKPNPKKE
Sbjct: 119 AEGAGDDLFGEIDKAIAMKRKEFVKQGLLKPNPKKE 154


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