BLASTX nr result

ID: Bupleurum21_contig00018941 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00018941
         (655 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK36982.1| unknown [Medicago truncatula]                           98   2e-18
ref|XP_003613588.1| F-box/FBD/LRR-repeat protein [Medicago trunc...    98   2e-18
ref|XP_002302466.1| predicted protein [Populus trichocarpa] gi|2...    86   5e-15
ref|XP_003550361.1| PREDICTED: F-box/FBD/LRR-repeat protein At1g...    83   4e-14
ref|XP_003630442.1| F-box/FBD/LRR-repeat protein [Medicago trunc...    82   1e-13

>gb|AFK36982.1| unknown [Medicago truncatula]
          Length = 418

 Score = 97.8 bits (242), Expect = 2e-18
 Identities = 72/205 (35%), Positives = 112/205 (54%), Gaps = 11/205 (5%)
 Frame = -3

Query: 653 DRISNLPRELITSILGSLPLQEVARTSVLSKAWRNIWSMHPYIYFDVPFHFHIIIHKKGS 474
           DRIS+LP  +I  IL  L ++++ARTS+LS+ WR+IW   P++ FD  F F +   K   
Sbjct: 15  DRISDLPSNVIDGILQHLNIRDLARTSILSRKWRDIWISFPWLEFDKDF-FDLYDLKDFK 73

Query: 473 DAYTSTISRVLDMILLVHSGPITVFCLYIPPTLYNP--NMYQWIEKLSSKGVQTIQIDFS 300
           D ++  +  ++  +LL+H+GPI  F L+IP     P   + +WI  LS KGV+ IQ+  +
Sbjct: 74  D-HSPEVCIIITEVLLLHNGPINKFTLFIPSGFNIPFGCIVKWILFLSRKGVKFIQLASN 132

Query: 299 KQSGEMLYTPFFDCADLTWLRLRKW-ILVPP-------IIPRTFASNLIHVGLDETIIH- 147
           +     + + FF    LT +R+ K+ +LVPP       ++   F       G  E++I  
Sbjct: 133 ESVPYRVPSHFFSFQKLTHVRICKFKLLVPPNFCGFKSLVHFHFERMTFEFGALESLISG 192

Query: 146 LPLSFGTQLQTLELANCSHIEHLDL 72
            PL     L+ L + NCS IE +DL
Sbjct: 193 CPL-----LEELYIVNCSGIECIDL 212


>ref|XP_003613588.1| F-box/FBD/LRR-repeat protein [Medicago truncatula]
           gi|355514923|gb|AES96546.1| F-box/FBD/LRR-repeat protein
           [Medicago truncatula]
          Length = 499

 Score = 97.8 bits (242), Expect = 2e-18
 Identities = 72/205 (35%), Positives = 112/205 (54%), Gaps = 11/205 (5%)
 Frame = -3

Query: 653 DRISNLPRELITSILGSLPLQEVARTSVLSKAWRNIWSMHPYIYFDVPFHFHIIIHKKGS 474
           DRIS+LP  +I  IL  L ++++ARTS+LS+ WR+IW   P++ FD  F F +   K   
Sbjct: 96  DRISDLPSNVIDGILQHLNIRDLARTSILSRKWRDIWISFPWLEFDKDF-FDLYDLKDFK 154

Query: 473 DAYTSTISRVLDMILLVHSGPITVFCLYIPPTLYNP--NMYQWIEKLSSKGVQTIQIDFS 300
           D ++  +  ++  +LL+H+GPI  F L+IP     P   + +WI  LS KGV+ IQ+  +
Sbjct: 155 D-HSPEVCIIITEVLLLHNGPINKFTLFIPSGFNIPFGCIVKWILFLSRKGVKFIQLASN 213

Query: 299 KQSGEMLYTPFFDCADLTWLRLRKW-ILVPP-------IIPRTFASNLIHVGLDETIIH- 147
           +     + + FF    LT +R+ K+ +LVPP       ++   F       G  E++I  
Sbjct: 214 ESVPYRVPSHFFSFQKLTHVRICKFKLLVPPNFCGFKSLVHFHFERMTFEFGALESLISG 273

Query: 146 LPLSFGTQLQTLELANCSHIEHLDL 72
            PL     L+ L + NCS IE +DL
Sbjct: 274 CPL-----LEELYIVNCSGIECIDL 293


>ref|XP_002302466.1| predicted protein [Populus trichocarpa] gi|222844192|gb|EEE81739.1|
           predicted protein [Populus trichocarpa]
          Length = 505

 Score = 86.3 bits (212), Expect = 5e-15
 Identities = 60/198 (30%), Positives = 95/198 (47%), Gaps = 4/198 (2%)
 Frame = -3

Query: 653 DRISNLPRELITSILGSLPLQEVARTSVLSKAWRNIWSMHPYIYFDVPFHFHIIIHKKGS 474
           DRIS+LP  ++  IL  LP+++  RTS L + WR  WS  P+I FD      I I  +  
Sbjct: 95  DRISSLPGHVLGQILSLLPIRDAVRTSALKRKWRYKWSQIPHIVFDSQ---GISISSQDQ 151

Query: 473 DAYTSTISRVLDMILLVHSGPITVFCLYIPPTLYNPNMYQWIEKLSSKGVQTIQIDFSKQ 294
               + +  ++D ILL+H+GPI  F L     L   ++ +WI  LS    +   ++  K 
Sbjct: 152 TTIKNKLVNIIDHILLLHNGPIYKFKLSHCDLLAVSDIDRWILHLSRGSTKEFVLEIWKG 211

Query: 293 SGEMLYTPFFDCADLTWLRLRKWILVPPIIPRTFAS----NLIHVGLDETIIHLPLSFGT 126
               L +  F   +L +L L   +L PP+  + F +    +L HV L + +    +S   
Sbjct: 212 QQYKLPSCLFSFKNLVYLELFNCLLKPPLAFKGFRNLKNLDLQHVTLAQEVFEKLISSCA 271

Query: 125 QLQTLELANCSHIEHLDL 72
            L+ L L N     HL++
Sbjct: 272 MLERLTLINFDGFTHLNI 289


>ref|XP_003550361.1| PREDICTED: F-box/FBD/LRR-repeat protein At1g13570-like [Glycine
           max]
          Length = 427

 Score = 83.2 bits (204), Expect = 4e-14
 Identities = 62/203 (30%), Positives = 95/203 (46%), Gaps = 9/203 (4%)
 Frame = -3

Query: 653 DRISNLPRELITSILGSLPLQEVARTSVLSKAWRNIWSMHPYIYFD-----VPFHFHIII 489
           DRIS LP  +I  +L  L ++E  RTSVLS  WR  W+  P + FD     V    H+II
Sbjct: 17  DRISCLPGHVIDQVLSHLSIREAVRTSVLSSKWRYKWATLPILVFDTHCVSVASQDHMII 76

Query: 488 HKKGSDAYTSTISRVLDMILLVHSGPITVFCLYIPPTLYNPNMYQWIEKLSSKGVQTIQI 309
             K        + R++D +LL+HSGPI  F L     +   ++ +W   L  K ++   +
Sbjct: 77  KNK--------LLRIIDHVLLLHSGPINKFKLSHRDLIGVTDIDRWTLHLCRKSIKEFVL 128

Query: 308 DFSKQSGEMLYTPFFDCADLTWLRLRKWILVPPIIPRTFAS----NLIHVGLDETIIHLP 141
           +  K     +++  F C  LT L L    L PP   + F +    +L HV L + +    
Sbjct: 129 EIWKGQRYKIHSCLFSCQSLTHLELFNCWLKPPSTFQGFKNLKSLDLQHVTLAQDVFENL 188

Query: 140 LSFGTQLQTLELANCSHIEHLDL 72
           +S    L+ L L N     +L++
Sbjct: 189 ISSCPLLERLTLMNFDGFTNLNI 211


>ref|XP_003630442.1| F-box/FBD/LRR-repeat protein [Medicago truncatula]
           gi|355524464|gb|AET04918.1| F-box/FBD/LRR-repeat protein
           [Medicago truncatula]
          Length = 380

 Score = 81.6 bits (200), Expect = 1e-13
 Identities = 61/198 (30%), Positives = 91/198 (45%), Gaps = 4/198 (2%)
 Frame = -3

Query: 653 DRISNLPRELITSILGSLPLQEVARTSVLSKAWRNIWSMHPYIYFDVPFHFHIIIHKKGS 474
           DRIS+LP  +I  IL  L  +++ RTSVLS+ WR +W   P + F   F        K  
Sbjct: 15  DRISDLPSNVIDGILEHLNARDLVRTSVLSRKWRYMWITVPRLEFCQDFFC------KYK 68

Query: 473 DAYTSTISRVLDMILLVHSGPITVFCLYIPPTLY---NPNMYQWIEKLSSKGVQTIQIDF 303
           D     +SR++  +L +H+GPI  F L+I        +  + +W+   S KGV+ IQ+  
Sbjct: 69  DLEALDVSRIITEVLFLHNGPIYKFILFITSNFLGFKSGYLIRWVMFSSRKGVKNIQLVN 128

Query: 302 SKQSGEMLYTPFFDCADLTWLRLRKWILVPPIIPRTFASNLIHVGLDETIIHLPLSFG-T 126
            +     + +  F C +LT                       H  LD +++HL L FG +
Sbjct: 129 DRYYIYRMPSHLFSCQELT-----------------------HNALDLSLVHLSLIFGCS 165

Query: 125 QLQTLELANCSHIEHLDL 72
            LQ L    CS  E +DL
Sbjct: 166 LLQELYTVQCSGYECVDL 183


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