BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00018932
         (772 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004143692.1| PREDICTED: pentatricopeptide repeat-containi...   143   4e-32
ref|XP_002275423.2| PREDICTED: pentatricopeptide repeat-containi...   136   6e-30
emb|CAN78081.1| hypothetical protein VITISV_021300 [Vitis vinifera]   136   6e-30
ref|XP_003591979.1| Pentatricopeptide repeat-containing protein ...   125   1e-26
ref|XP_002523895.1| pentatricopeptide repeat-containing protein,...   122   1e-25

>ref|XP_004143692.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Cucumis sativus]
           gi|449529106|ref|XP_004171542.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At2g16880-like [Cucumis sativus]
          Length = 783

 Score =  143 bits (361), Expect = 4e-32
 Identities = 72/183 (39%), Positives = 104/183 (56%)
 Frame = -1

Query: 550 PNTLVSFFNWTQKHTLSPHTDAXXXXXXXXXXXXXLFSHNKFSDARSLLVKHIATDPQHR 371
           P+ L++ F W QKH  S  +               LF H  FSDA+SLL+  I++D QH 
Sbjct: 64  PSVLLNVFKWAQKHVPSFSSPPNNSLSSLLTLLPSLFRHYMFSDAKSLLISFISSDRQHE 123

Query: 370 LHRMLLHPDPSLPRPNKPLLDTAVGAYVHCGYPSLANQVFDRMIRLKFRPXXXXXXXXXX 191
           LH+++LHP   LP P+K LLDT++GAYV    P LA Q+F++M RL +RP          
Sbjct: 124 LHKLILHPTRDLPEPSKELLDTSIGAYVQMDQPHLATQIFNKMKRLNYRPNLLTCNTLMN 183

Query: 190 XXXXXXXXXXXXSCRRVVCNAIELGVGLNTQTFNILVKGYCLRNKFSEAMEVLNSMGEYN 11
                         R+V+ ++I+LGV  NT +FNIL+ GYCL +K  +A++ +N M E+ 
Sbjct: 184 SLVRYPSSSSILLARQVLKDSIKLGVVPNTNSFNILIYGYCLESKVKDALDWVNKMSEFG 243

Query: 10  CLP 2
           C+P
Sbjct: 244 CVP 246


>ref|XP_002275423.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Vitis vinifera]
          Length = 778

 Score =  136 bits (342), Expect = 6e-30
 Identities = 79/185 (42%), Positives = 99/185 (53%), Gaps = 1/185 (0%)
 Frame = -1

Query: 553 RPNTLVSFFNWTQKHTLS-PHTDAXXXXXXXXXXXXXLFSHNKFSDARSLLVKHIATDPQ 377
           RPN L+SFF W Q +  + PH                 FSH KFSDA+SLL+  IATD +
Sbjct: 65  RPNILISFFKWAQTNLPTFPHNSLPSLLSLLPSL----FSHRKFSDAKSLLLGFIATDRR 120

Query: 376 HRLHRMLLHPDPSLPRPNKPLLDTAVGAYVHCGYPSLANQVFDRMIRLKFRPXXXXXXXX 197
           H LH  +L     L  P+K LLDTA+GAYV  G P  A Q+F +M RL+ RP        
Sbjct: 121 HDLHLSILR----LTSPSKALLDTAIGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTL 176

Query: 196 XXXXXXXXXXXXXXSCRRVVCNAIELGVGLNTQTFNILVKGYCLRNKFSEAMEVLNSMGE 17
                           R    +AI+LG+  N  TFNI++ GYCL NKF +A+E LN MG+
Sbjct: 177 LNSLVRYPSSHSVSFSREAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGK 236

Query: 16  YNCLP 2
           YNC P
Sbjct: 237 YNCSP 241


>emb|CAN78081.1| hypothetical protein VITISV_021300 [Vitis vinifera]
          Length = 778

 Score =  136 bits (342), Expect = 6e-30
 Identities = 79/185 (42%), Positives = 99/185 (53%), Gaps = 1/185 (0%)
 Frame = -1

Query: 553 RPNTLVSFFNWTQKHTLS-PHTDAXXXXXXXXXXXXXLFSHNKFSDARSLLVKHIATDPQ 377
           RPN L+SFF W Q +  + PH                 FSH KFSDA+SLL+  IATD +
Sbjct: 65  RPNILISFFKWAQTNLPTFPHNSLPSLLSLLPSL----FSHRKFSDAKSLLLGFIATDRR 120

Query: 376 HRLHRMLLHPDPSLPRPNKPLLDTAVGAYVHCGYPSLANQVFDRMIRLKFRPXXXXXXXX 197
           H LH  +L     L  P+K LLDTA+GAYV  G P  A Q+F +M RL+ RP        
Sbjct: 121 HDLHLSILR----LTSPSKALLDTAIGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTL 176

Query: 196 XXXXXXXXXXXXXXSCRRVVCNAIELGVGLNTQTFNILVKGYCLRNKFSEAMEVLNSMGE 17
                           R    +AI+LG+  N  TFNI++ GYCL NKF +A+E LN MG+
Sbjct: 177 LNSLVRYPSSHSVSFSREAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGK 236

Query: 16  YNCLP 2
           YNC P
Sbjct: 237 YNCSP 241


>ref|XP_003591979.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355481027|gb|AES62230.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 873

 Score =  125 bits (314), Expect = 1e-26
 Identities = 73/185 (39%), Positives = 97/185 (52%), Gaps = 1/185 (0%)
 Frame = -1

Query: 553 RPNTLVSFFNWTQKHTLSPHTDAXXXXXXXXXXXXXLFSHNKFSDARSLLVKHIATD-PQ 377
           +P TL+SFF W Q +    H+               L S  KFSDA+SLL+  I++D P 
Sbjct: 66  QPETLLSFFKWFQSNA---HSSLIHSPKPLLTLLPPLLSRRKFSDAKSLLLNFISSDHPH 122

Query: 376 HRLHRMLLHPDPSLPRPNKPLLDTAVGAYVHCGYPSLANQVFDRMIRLKFRPXXXXXXXX 197
           H LH  LL  D ++P   KPLLDT++ AYV    P L +Q+F++M RL+FRP        
Sbjct: 123 HSLHAHLLRSDHTIP---KPLLDTSLAAYVISKQPHLGHQIFNKMKRLRFRPNLLTCNTL 179

Query: 196 XXXXXXXXXXXXXXSCRRVVCNAIELGVGLNTQTFNILVKGYCLRNKFSEAMEVLNSMGE 17
                           R V  +A++LGV  N  TFNIL+ GYC  N   EA+ ++N MGE
Sbjct: 180 LNALVRSNSSHSLVFSREVFQDAVKLGVQPNVNTFNILIHGYCSDNNTEEALRLINQMGE 239

Query: 16  YNCLP 2
           Y C P
Sbjct: 240 YGCCP 244


>ref|XP_002523895.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223536825|gb|EEF38464.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 784

 Score =  122 bits (305), Expect = 1e-25
 Identities = 70/188 (37%), Positives = 98/188 (52%), Gaps = 4/188 (2%)
 Frame = -1

Query: 553 RPNTLVSFFNWTQKH----TLSPHTDAXXXXXXXXXXXXXLFSHNKFSDARSLLVKHIAT 386
           +PNTL+SFF W+Q H    +LSP                 L SH+KFSDA+SLL   I+ 
Sbjct: 66  KPNTLLSFFKWSQTHLSVTSLSP--------LPLISLLSPLLSHHKFSDAKSLLTAFISA 117

Query: 385 DPQHRLHRMLLHPDPSLPRPNKPLLDTAVGAYVHCGYPSLANQVFDRMIRLKFRPXXXXX 206
           D  H LH  LLH      +  + +LDT++GAYV C  P  A Q+F+RM RL  +P     
Sbjct: 118 DRTHLLHHHLLHSPFKKVQSLRVILDTSIGAYVACNRPHHAAQIFNRMKRLHLKPNLLTC 177

Query: 205 XXXXXXXXXXXXXXXXXSCRRVVCNAIELGVGLNTQTFNILVKGYCLRNKFSEAMEVLNS 26
                              + +  + I+LGV +NT TFNIL+ G C+ NK SEA+ ++  
Sbjct: 178 NTLINALVRYPSKPSVYLSKAIFSDVIKLGVKVNTNTFNILIYGCCIENKLSEAIGLIGK 237

Query: 25  MGEYNCLP 2
           M +++C P
Sbjct: 238 MKDFSCFP 245