BLASTX nr result

ID: Bupleurum21_contig00018925 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00018925
         (1131 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635380.1| PREDICTED: cytosolic Fe-S cluster assembly f...   473   e-131
ref|XP_004139529.1| PREDICTED: cytosolic Fe-S cluster assembly f...   461   e-127
ref|XP_003529671.1| PREDICTED: cytosolic Fe-S cluster assembly f...   456   e-126
ref|XP_003603993.1| Cytosolic Fe-S cluster assembly factor NARFL...   455   e-125
ref|XP_002323132.1| predicted protein [Populus trichocarpa] gi|2...   454   e-125

>ref|XP_003635380.1| PREDICTED: cytosolic Fe-S cluster assembly factor NARFL-like [Vitis
           vinifera] gi|297744923|emb|CBI38438.3| unnamed protein
           product [Vitis vinifera]
          Length = 478

 Score =  473 bits (1217), Expect = e-131
 Identities = 244/320 (76%), Positives = 269/320 (84%), Gaps = 3/320 (0%)
 Frame = -1

Query: 951 MSEKFSATLRIGDLNDYIAPSQGCVVSLKANPPTNRLGKNVAKVVDAPKQLQAEPVKISL 772
           MSEKFSATLRIGDLND+IAPSQGCVVSLK         +  A+VV   K    EPVKISL
Sbjct: 1   MSEKFSATLRIGDLNDFIAPSQGCVVSLKGLKAAPAKPEK-AEVVTGTKSANTEPVKISL 59

Query: 771 KDCLACSGCITSAETVMLEKQSLDEFQSNIDKGKIVIVSLSPQSRASLAEYFELSPLQVF 592
           KDCLACSGCITSAETVMLEKQS+DEF  NI+KGK VIVSLSPQSRAS A +F LSPLQV 
Sbjct: 60  KDCLACSGCITSAETVMLEKQSMDEFLFNINKGKAVIVSLSPQSRASFAIHFGLSPLQVL 119

Query: 591 RKLTTFFKSLGVKTIFDTSCSRDLVLIESCNEFITRYKQSHSTDNDKNKSMVPMISSACP 412
           RKLTTFFKSLGVK +FDTSCSRDL LIESCN FI+RYKQ HST+++K K+ +PM+SSACP
Sbjct: 120 RKLTTFFKSLGVKAVFDTSCSRDLSLIESCNAFISRYKQHHSTEDEKCKTSLPMLSSACP 179

Query: 411 GWICYAEKTLGSYILPYISSVKSPQQTIGAIIKQHLSQKMSIRPEDIYHVTVMPCYDKKL 232
           GWICYAEKTLGSYILPYISSVKSPQQTIG  IK +L QKM  RP+++YHV+VMPCYDKKL
Sbjct: 180 GWICYAEKTLGSYILPYISSVKSPQQTIGVTIKNYLCQKMGFRPDEVYHVSVMPCYDKKL 239

Query: 231 EAARDDFVFDVESHGDVPR---VNVTEVDSVLTSGEVLELIQSKGVDFKALEDSPLDTLL 61
           EAARDDFVF+V+S G V     + +TEVDSVLTSGEVLELIQ K VDFK LE+SPLD LL
Sbjct: 240 EAARDDFVFEVDSPGGVHENTGLRITEVDSVLTSGEVLELIQLKSVDFKNLEESPLDRLL 299

Query: 60  TNVDEEGQLYGVSGSSGGYA 1
           TNV+EEG LYGV GSSGGYA
Sbjct: 300 TNVNEEGHLYGVQGSSGGYA 319


>ref|XP_004139529.1| PREDICTED: cytosolic Fe-S cluster assembly factor NARFL-like
           [Cucumis sativus] gi|449505551|ref|XP_004162505.1|
           PREDICTED: cytosolic Fe-S cluster assembly factor
           NARFL-like [Cucumis sativus]
          Length = 478

 Score =  461 bits (1185), Expect = e-127
 Identities = 235/320 (73%), Positives = 269/320 (84%), Gaps = 3/320 (0%)
 Frame = -1

Query: 951 MSEKFSATLRIGDLNDYIAPSQGCVVSLKANPPTNRLGKNVAKVVDAPKQLQAEPVKISL 772
           MSEKFSATLRIGDLND+IAPSQ C+VSLK    T      V +V  +  QL+AEPVKISL
Sbjct: 1   MSEKFSATLRIGDLNDFIAPSQACIVSLKGLKATATKPDKV-EVSASRMQLKAEPVKISL 59

Query: 771 KDCLACSGCITSAETVMLEKQSLDEFQSNIDKGKIVIVSLSPQSRASLAEYFELSPLQVF 592
           KDCLACSGC+TSAETVMLEKQSLDEF SN++KGK+VIVSLSPQSRASLA +F +SPL+VF
Sbjct: 60  KDCLACSGCVTSAETVMLEKQSLDEFLSNLNKGKVVIVSLSPQSRASLAVHFGISPLKVF 119

Query: 591 RKLTTFFKSLGVKTIFDTSCSRDLVLIESCNEFITRYKQSHSTDNDKNKSMVPMISSACP 412
           +KLTTFFKS+GVK IFDTSCSRDL LIE+CNEFI RY+ S   + +K KS VPMISSACP
Sbjct: 120 KKLTTFFKSMGVKAIFDTSCSRDLTLIEACNEFIARYRNSQQDNEEKCKSSVPMISSACP 179

Query: 411 GWICYAEKTLGSYILPYISSVKSPQQTIGAIIKQHLSQKMSIRPEDIYHVTVMPCYDKKL 232
           GWICYAEK  GSYILPYISSVKSPQQ IG+I+K H+ QK+ IR +D+YHVTVMPCYDKKL
Sbjct: 180 GWICYAEKQHGSYILPYISSVKSPQQMIGSIVKHHMCQKLGIRSDDVYHVTVMPCYDKKL 239

Query: 231 EAARDDFVFDVESHG---DVPRVNVTEVDSVLTSGEVLELIQSKGVDFKALEDSPLDTLL 61
           EAAR+DFVF ++S     +     +TEVDSVLTSGEVLELIQ K VDFK+LE+SPLD +L
Sbjct: 240 EAAREDFVFQLDSANKTLEAEAHRITEVDSVLTSGEVLELIQMKEVDFKSLEESPLDRML 299

Query: 60  TNVDEEGQLYGVSGSSGGYA 1
           TNV+EEG L+GVSGSSGGYA
Sbjct: 300 TNVNEEGHLFGVSGSSGGYA 319


>ref|XP_003529671.1| PREDICTED: cytosolic Fe-S cluster assembly factor NARFL-like
           [Glycine max]
          Length = 474

 Score =  456 bits (1172), Expect = e-126
 Identities = 227/320 (70%), Positives = 271/320 (84%), Gaps = 3/320 (0%)
 Frame = -1

Query: 951 MSEKFSATLRIGDLNDYIAPSQGCVVSLKANPPTNRLGKNVAKVVDAPKQLQAEPVKISL 772
           MSEKFSA LRIGDLNDYIAPSQ C+VSLK     ++   ++A      KQ+  EPVKISL
Sbjct: 1   MSEKFSAALRIGDLNDYIAPSQACIVSLKGLKKNDKPEVSIAN-----KQVNFEPVKISL 55

Query: 771 KDCLACSGCITSAETVMLEKQSLDEFQSNIDKGKIVIVSLSPQSRASLAEYFELSPLQVF 592
           KDCLACSGC+TSAETVMLEKQSLDEF +NI+ GK VIVSLSPQSRAS+A +F +SP+Q F
Sbjct: 56  KDCLACSGCVTSAETVMLEKQSLDEFLNNINSGKAVIVSLSPQSRASIAVHFGISPIQAF 115

Query: 591 RKLTTFFKSLGVKTIFDTSCSRDLVLIESCNEFITRYKQSHSTDNDKNKSMVPMISSACP 412
           +KLT FFKSLGVK +FDTSCSRDL L+ESC EFITRY+Q+   D++++KS +PMI+SACP
Sbjct: 116 KKLTRFFKSLGVKAVFDTSCSRDLTLVESCVEFITRYRQNQLVDDERSKSSLPMIASACP 175

Query: 411 GWICYAEKTLGSYILPYISSVKSPQQTIGAIIKQHLSQKMSIRPEDIYHVTVMPCYDKKL 232
           GWICYAEK LGS++LPYISSVKSPQQT+GAIIK ++ Q++ +RPE++YHVTVMPCYDKKL
Sbjct: 176 GWICYAEKQLGSFVLPYISSVKSPQQTVGAIIKNYVCQELGLRPEEVYHVTVMPCYDKKL 235

Query: 231 EAARDDFVFDVESH--GDVPRVN-VTEVDSVLTSGEVLELIQSKGVDFKALEDSPLDTLL 61
           EAARDDFVF  ESH  G    +N ++EVDSVLT+GEVLELIQSK VDFK+LE++PLD +L
Sbjct: 236 EAARDDFVFQFESHVEGLESEINMISEVDSVLTTGEVLELIQSKEVDFKSLEETPLDKIL 295

Query: 60  TNVDEEGQLYGVSGSSGGYA 1
           TN++EEG LYGV GSSGGYA
Sbjct: 296 TNINEEGYLYGVHGSSGGYA 315


>ref|XP_003603993.1| Cytosolic Fe-S cluster assembly factor NARFL [Medicago truncatula]
           gi|355493041|gb|AES74244.1| Cytosolic Fe-S cluster
           assembly factor NARFL [Medicago truncatula]
          Length = 483

 Score =  455 bits (1170), Expect = e-125
 Identities = 224/320 (70%), Positives = 272/320 (85%), Gaps = 3/320 (0%)
 Frame = -1

Query: 951 MSEKFSATLRIGDLNDYIAPSQGCVVSLKANPPTNRLGKNVAKVVDAPKQLQAEPVKISL 772
           MSEKFS  LRIGDLND+IAPSQ C+VSLK    T++   +  +V  A +Q+++EPVKISL
Sbjct: 5   MSEKFSPALRIGDLNDFIAPSQACIVSLKGFNKTDKKKPDKVEVSIADRQVKSEPVKISL 64

Query: 771 KDCLACSGCITSAETVMLEKQSLDEFQSNIDKGKIVIVSLSPQSRASLAEYFELSPLQVF 592
           KDCLACSGC+TSAETVMLEKQ LDEF SNI+KGK VIVS+SPQSR S+A +F +SP+Q F
Sbjct: 65  KDCLACSGCVTSAETVMLEKQGLDEFLSNINKGKAVIVSVSPQSRTSIATHFGISPVQAF 124

Query: 591 RKLTTFFKSLGVKTIFDTSCSRDLVLIESCNEFITRYKQSHSTDNDKNKSMVPMISSACP 412
           +KLT FFKSLGV+ IFDTSCSRDL L+ESC EFITRY+Q+   D++++KS +PMI+SACP
Sbjct: 125 KKLTRFFKSLGVRAIFDTSCSRDLTLVESCVEFITRYRQNQLVDDERSKSSLPMIASACP 184

Query: 411 GWICYAEKTLGSYILPYISSVKSPQQTIGAIIKQHLSQKMSIRPEDIYHVTVMPCYDKKL 232
           GWICYAEK LGS++LPYISSVKSPQQTIG IIK+++ Q M +RPE++YHVTVMPCYDKKL
Sbjct: 185 GWICYAEKQLGSFVLPYISSVKSPQQTIGTIIKRYVCQDMELRPEEVYHVTVMPCYDKKL 244

Query: 231 EAARDDFVFDVESH--GDVPRVN-VTEVDSVLTSGEVLELIQSKGVDFKALEDSPLDTLL 61
           EA+RDDFVF ++ H  G    VN ++EVDSVLT+GE+LEL+QSK VDFK+LE++PLD LL
Sbjct: 245 EASRDDFVFQLDPHAEGHEGEVNMISEVDSVLTTGEILELVQSKEVDFKSLEEAPLDKLL 304

Query: 60  TNVDEEGQLYGVSGSSGGYA 1
           TNV+EEG LYGV GSSGGYA
Sbjct: 305 TNVNEEGDLYGVRGSSGGYA 324


>ref|XP_002323132.1| predicted protein [Populus trichocarpa] gi|222867762|gb|EEF04893.1|
           predicted protein [Populus trichocarpa]
          Length = 471

 Score =  454 bits (1168), Expect = e-125
 Identities = 228/318 (71%), Positives = 262/318 (82%), Gaps = 1/318 (0%)
 Frame = -1

Query: 951 MSEKFSATLRIGDLNDYIAPSQGCVVSLKANPPTNRLGKNVAKVVDAPKQLQAEPVKISL 772
           MSEKFS TLRIGDL+D+IAPSQ CVVSLK       L       V    + Q +PVKISL
Sbjct: 1   MSEKFSPTLRIGDLSDFIAPSQACVVSLKG------LKTTAPNTVAIANKEQTDPVKISL 54

Query: 771 KDCLACSGCITSAETVMLEKQSLDEFQSNIDKGKIVIVSLSPQSRASLAEYFELSPLQVF 592
           KDCLACSGCITSAETVMLEKQSLD+F SNIDKGK +IVSLSPQSRASLA YF +SPLQVF
Sbjct: 55  KDCLACSGCITSAETVMLEKQSLDDFLSNIDKGKAIIVSLSPQSRASLAVYFGISPLQVF 114

Query: 591 RKLTTFFKSLGVKTIFDTSCSRDLVLIESCNEFITRYKQSHSTDNDKNKSMVPMISSACP 412
           +KLTTFFKSLGVK +FDTS SRDL LIE+CNEF+ RYKQS   +N+K+ S +PM+SSACP
Sbjct: 115 KKLTTFFKSLGVKAVFDTSSSRDLTLIETCNEFVNRYKQSQLNNNEKSNSALPMLSSACP 174

Query: 411 GWICYAEKTLGSYILPYISSVKSPQQTIGAIIKQHLSQKMSIRPEDIYHVTVMPCYDKKL 232
           GWICYAEK LGSY+LP+ISSVKSPQQTIGA IK H+ QKM +RP+++YHVTVMPCYDKKL
Sbjct: 175 GWICYAEKQLGSYVLPFISSVKSPQQTIGATIKHHICQKMGLRPDEVYHVTVMPCYDKKL 234

Query: 231 EAARDDFVFDVESH-GDVPRVNVTEVDSVLTSGEVLELIQSKGVDFKALEDSPLDTLLTN 55
           EA RDDFVF+VE    +   + + EVDSVLT+GEVL+LI+ K VDF+ L+DSPLD +LTN
Sbjct: 235 EAVRDDFVFEVEQEDANKNGLRIAEVDSVLTTGEVLDLIKFKAVDFETLDDSPLDKMLTN 294

Query: 54  VDEEGQLYGVSGSSGGYA 1
           V EEG LYGV+GSSGGYA
Sbjct: 295 VSEEGYLYGVAGSSGGYA 312


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