BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00018904
         (1090 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274640.2| PREDICTED: LOW QUALITY PROTEIN: putative DNA...   517   e-144
emb|CBI21870.3| unnamed protein product [Vitis vinifera]              517   e-144
emb|CAN79218.1| hypothetical protein VITISV_012795 [Vitis vinifera]   515   e-144
ref|XP_002517890.1| conserved hypothetical protein [Ricinus comm...   479   e-133
ref|XP_002328055.1| chromatin remodeling complex subunit [Populu...   464   e-128

>ref|XP_002274640.2| PREDICTED: LOW QUALITY PROTEIN: putative DNA repair and recombination
            protein RAD26-like [Vitis vinifera]
          Length = 851

 Score =  517 bits (1332), Expect = e-144
 Identities = 261/354 (73%), Positives = 287/354 (81%), Gaps = 5/354 (1%)
 Frame = -3

Query: 1049 PINPRKLPKFSLVEQFLRLQDPVSTLPQINPQSQPK-----ETHEEKVAHGSLVGSKSDL 885
            PINPRK PK SL +Q  RLQDP S LPQI P++Q K     E  EE  A       +   
Sbjct: 35   PINPRKPPKSSLSKQLQRLQDPFS-LPQIQPRNQQKQSLDHEEEEEVEAQEGFEKPQLGF 93

Query: 884  FQLDHTGPYDPLVLSSPQETPIVQVPASINCRLLEHQRGGVQFLYNLYKNNHGGVLGDDM 705
             Q D TGP+ PLVLSS  E P++QVPASIN RLLEHQR GV+FLYNLYK+NHGGVLGDDM
Sbjct: 94   LQFDLTGPFVPLVLSSDDEVPVIQVPASINHRLLEHQREGVKFLYNLYKHNHGGVLGDDM 153

Query: 704  GLGKTIQTIAFLSAVYVKDPDVGDSTTLDGKHANKERPVLIVCPSSVIQNWESEFSKWAA 525
            GLGKTIQTIAFL+A++ KD + GDST L G    K+ PVLIVCP+SVI NWESEFSKWA 
Sbjct: 154  GLGKTIQTIAFLAAMFGKDGECGDSTILKGNQMGKKGPVLIVCPTSVIHNWESEFSKWAT 213

Query: 524  FDVSIYHGANRDLIMEKLEAHRVEILITSFDTYRIHGNILSQIPWEIVIIDEAHRLKNEK 345
            F VS+YHGANRDLI++KLEAH VEILITSFDTYRIHG+ILS++PWEIV+IDEAHRLKNEK
Sbjct: 214  FSVSVYHGANRDLILDKLEAHGVEILITSFDTYRIHGSILSEVPWEIVVIDEAHRLKNEK 273

Query: 344  SKLYQACLAIKTRKRYGLTGTIMQNKLMELFNLFDWVVPGCLGTREHFREFYDEPLKHGQ 165
            SKLY ACL IKT KR GLTGTIMQNK+MELFNLFDWV PGCLGTREHFREFYDEPLKHGQ
Sbjct: 274  SKLYTACLEIKTCKRIGLTGTIMQNKIMELFNLFDWVAPGCLGTREHFREFYDEPLKHGQ 333

Query: 164  RSSAPERFVKIADERKQHXXXXXXXXXXXRTKEETIGHLMMGKEDNVVFCAMSE 3
            RS+APERFV++ADERKQH           RTKEETIGHLMMGKEDNVVFCAMSE
Sbjct: 334  RSTAPERFVRVADERKQHLVAVLHKYLLRRTKEETIGHLMMGKEDNVVFCAMSE 387


>emb|CBI21870.3| unnamed protein product [Vitis vinifera]
          Length = 874

 Score =  517 bits (1332), Expect = e-144
 Identities = 261/354 (73%), Positives = 287/354 (81%), Gaps = 5/354 (1%)
 Frame = -3

Query: 1049 PINPRKLPKFSLVEQFLRLQDPVSTLPQINPQSQPK-----ETHEEKVAHGSLVGSKSDL 885
            PINPRK PK SL +Q  RLQDP S LPQI P++Q K     E  EE  A       +   
Sbjct: 35   PINPRKPPKSSLSKQLQRLQDPFS-LPQIQPRNQQKQSLDHEEEEEVEAQEGFEKPQLGF 93

Query: 884  FQLDHTGPYDPLVLSSPQETPIVQVPASINCRLLEHQRGGVQFLYNLYKNNHGGVLGDDM 705
             Q D TGP+ PLVLSS  E P++QVPASIN RLLEHQR GV+FLYNLYK+NHGGVLGDDM
Sbjct: 94   LQFDLTGPFVPLVLSSDDEVPVIQVPASINHRLLEHQREGVKFLYNLYKHNHGGVLGDDM 153

Query: 704  GLGKTIQTIAFLSAVYVKDPDVGDSTTLDGKHANKERPVLIVCPSSVIQNWESEFSKWAA 525
            GLGKTIQTIAFL+A++ KD + GDST L G    K+ PVLIVCP+SVI NWESEFSKWA 
Sbjct: 154  GLGKTIQTIAFLAAMFGKDGECGDSTILKGNQMGKKGPVLIVCPTSVIHNWESEFSKWAT 213

Query: 524  FDVSIYHGANRDLIMEKLEAHRVEILITSFDTYRIHGNILSQIPWEIVIIDEAHRLKNEK 345
            F VS+YHGANRDLI++KLEAH VEILITSFDTYRIHG+ILS++PWEIV+IDEAHRLKNEK
Sbjct: 214  FSVSVYHGANRDLILDKLEAHGVEILITSFDTYRIHGSILSEVPWEIVVIDEAHRLKNEK 273

Query: 344  SKLYQACLAIKTRKRYGLTGTIMQNKLMELFNLFDWVVPGCLGTREHFREFYDEPLKHGQ 165
            SKLY ACL IKT KR GLTGTIMQNK+MELFNLFDWV PGCLGTREHFREFYDEPLKHGQ
Sbjct: 274  SKLYTACLEIKTCKRIGLTGTIMQNKIMELFNLFDWVAPGCLGTREHFREFYDEPLKHGQ 333

Query: 164  RSSAPERFVKIADERKQHXXXXXXXXXXXRTKEETIGHLMMGKEDNVVFCAMSE 3
            RS+APERFV++ADERKQH           RTKEETIGHLMMGKEDNVVFCAMSE
Sbjct: 334  RSTAPERFVRVADERKQHLVAVLHKYLLRRTKEETIGHLMMGKEDNVVFCAMSE 387


>emb|CAN79218.1| hypothetical protein VITISV_012795 [Vitis vinifera]
          Length = 874

 Score =  515 bits (1326), Expect = e-144
 Identities = 261/354 (73%), Positives = 287/354 (81%), Gaps = 5/354 (1%)
 Frame = -3

Query: 1049 PINPRKLPKFSLVEQFLRLQDPVSTLPQINPQSQPK-----ETHEEKVAHGSLVGSKSDL 885
            PINPRK PK SL +Q  RLQDP S LPQI P++Q K     E  EE  A       +   
Sbjct: 35   PINPRKPPKSSLSKQLQRLQDPFS-LPQIQPRNQQKQSLDHEEEEEVEAQEGFEKPQLGF 93

Query: 884  FQLDHTGPYDPLVLSSPQETPIVQVPASINCRLLEHQRGGVQFLYNLYKNNHGGVLGDDM 705
             Q D TGP+ PLVLSS  E P++QVPASIN RLLEHQR GV+FLYNLYK+NHGGVLGDDM
Sbjct: 94   LQFDLTGPFVPLVLSSDDEVPVIQVPASINHRLLEHQREGVKFLYNLYKHNHGGVLGDDM 153

Query: 704  GLGKTIQTIAFLSAVYVKDPDVGDSTTLDGKHANKERPVLIVCPSSVIQNWESEFSKWAA 525
            GLGKTIQTIAFL+A++ KD + GDST L G    K+ PVLIVCP+SVI NWESEFSKWA 
Sbjct: 154  GLGKTIQTIAFLAAMFGKDGECGDSTILKGNQMGKKGPVLIVCPTSVIHNWESEFSKWAT 213

Query: 524  FDVSIYHGANRDLIMEKLEAHRVEILITSFDTYRIHGNILSQIPWEIVIIDEAHRLKNEK 345
            F VS+YHGANRDLI++KLEAH VEILITSFDTYRIHG+ILS++PWEIV+IDEAHRLKNEK
Sbjct: 214  FSVSVYHGANRDLILDKLEAHGVEILITSFDTYRIHGSILSEVPWEIVVIDEAHRLKNEK 273

Query: 344  SKLYQACLAIKTRKRYGLTGTIMQNKLMELFNLFDWVVPGCLGTREHFREFYDEPLKHGQ 165
            SKLY ACL IKT KR GLTGTIMQNK+MELFNLFDWV PGCLGTREHFREFYDEPLKHGQ
Sbjct: 274  SKLYTACLEIKTCKRIGLTGTIMQNKIMELFNLFDWVAPGCLGTREHFREFYDEPLKHGQ 333

Query: 164  RSSAPERFVKIADERKQHXXXXXXXXXXXRTKEETIGHLMMGKEDNVVFCAMSE 3
            RS+APERFV++ADERK H           RTKEETIGHLMMGKEDNVVFCAMSE
Sbjct: 334  RSTAPERFVRVADERKXHLVAVLHXYLLRRTKEETIGHLMMGKEDNVVFCAMSE 387


>ref|XP_002517890.1| conserved hypothetical protein [Ricinus communis]
            gi|223542872|gb|EEF44408.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 870

 Score =  479 bits (1233), Expect = e-133
 Identities = 247/367 (67%), Positives = 277/367 (75%), Gaps = 21/367 (5%)
 Frame = -3

Query: 1040 PRKLPKFSLVEQFLRLQDPVSTLPQINPQSQPKETHEEKVAHGSLV-------GSKSDL- 885
            PRK PK +L +Q  RL D   +LP    QSQ   T + +      +       G + D  
Sbjct: 40   PRKPPKSNLSQQLQRLGDFYLSLPHQQSQSQISLTPQTQKPQSLKLQIQVEKNGKEEDKE 99

Query: 884  -------------FQLDHTGPYDPLVLSSPQETPIVQVPASINCRLLEHQRGGVQFLYNL 744
                         FQ DHTGP++PL+LS P E PIVQVPASINCRLLEHQR GV+FLY L
Sbjct: 100  REFEDFERPKLGQFQFDHTGPFEPLLLSLPGEVPIVQVPASINCRLLEHQREGVKFLYKL 159

Query: 743  YKNNHGGVLGDDMGLGKTIQTIAFLSAVYVKDPDVGDSTTLDGKHANKERPVLIVCPSSV 564
            Y+NNHGGVLGDDMGLGKTIQTIAFL+AVY KD +  DST L      K+ PVLIVCP+SV
Sbjct: 160  YRNNHGGVLGDDMGLGKTIQTIAFLAAVYGKDGESTDSTMLRDNQVRKQGPVLIVCPTSV 219

Query: 563  IQNWESEFSKWAAFDVSIYHGANRDLIMEKLEAHRVEILITSFDTYRIHGNILSQIPWEI 384
            IQNWE E S+WA F+VS+YHGANRDLI EKL+A  VEILITSFDTYRIHGNILS+  WEI
Sbjct: 220  IQNWEIELSRWATFNVSLYHGANRDLIREKLDAGGVEILITSFDTYRIHGNILSEFKWEI 279

Query: 383  VIIDEAHRLKNEKSKLYQACLAIKTRKRYGLTGTIMQNKLMELFNLFDWVVPGCLGTREH 204
            VI+DEAHRLKNEKSKLY+ACL IKT+KR GLTGTIMQNK+MELFNLFDWV PG LGTREH
Sbjct: 280  VIVDEAHRLKNEKSKLYEACLEIKTQKRIGLTGTIMQNKIMELFNLFDWVAPGSLGTREH 339

Query: 203  FREFYDEPLKHGQRSSAPERFVKIADERKQHXXXXXXXXXXXRTKEETIGHLMMGKEDNV 24
            FREFYDEPLKHGQR++APERFV++ADERK H           RTKEETIGHLM+GKEDNV
Sbjct: 340  FREFYDEPLKHGQRATAPERFVRVADERKGHLVAVLGKYMLRRTKEETIGHLMLGKEDNV 399

Query: 23   VFCAMSE 3
            VFCAMSE
Sbjct: 400  VFCAMSE 406


>ref|XP_002328055.1| chromatin remodeling complex subunit [Populus trichocarpa]
            gi|222837464|gb|EEE75843.1| chromatin remodeling complex
            subunit [Populus trichocarpa]
          Length = 843

 Score =  464 bits (1194), Expect = e-128
 Identities = 230/345 (66%), Positives = 271/345 (78%)
 Frame = -3

Query: 1037 RKLPKFSLVEQFLRLQDPVSTLPQINPQSQPKETHEEKVAHGSLVGSKSDLFQLDHTGPY 858
            RK PK SL +Q  RL +P             +E  E++     L  +K   FQ +HTGP+
Sbjct: 50   RKPPKSSLSKQLQRLGEPFHR----------QEEEEKEREFEDLGRTKLGQFQFEHTGPF 99

Query: 857  DPLVLSSPQETPIVQVPASINCRLLEHQRGGVQFLYNLYKNNHGGVLGDDMGLGKTIQTI 678
            +PLVLS   E P+++VPASINCRLLEHQR GV+FLY LY +NHGGVLGDDMGLGKTIQTI
Sbjct: 100  EPLVLSLLGEVPVIRVPASINCRLLEHQREGVKFLYKLYLDNHGGVLGDDMGLGKTIQTI 159

Query: 677  AFLSAVYVKDPDVGDSTTLDGKHANKERPVLIVCPSSVIQNWESEFSKWAAFDVSIYHGA 498
            AFL+A++ KD + G+S TL G    K+ PVLI+CP+SVI NWESEFS+WA+F VS+YHG 
Sbjct: 160  AFLAAIFEKDEESGESITLRGNQVGKKGPVLIICPTSVIHNWESEFSRWASFSVSLYHGT 219

Query: 497  NRDLIMEKLEAHRVEILITSFDTYRIHGNILSQIPWEIVIIDEAHRLKNEKSKLYQACLA 318
            NRDLI+EKL+A  VEILITSFDTYRIHG+ILS++ WE+VI+DEAHRLKNEKSKLY ACL 
Sbjct: 220  NRDLILEKLKAGGVEILITSFDTYRIHGSILSEVDWEVVIVDEAHRLKNEKSKLYLACLE 279

Query: 317  IKTRKRYGLTGTIMQNKLMELFNLFDWVVPGCLGTREHFREFYDEPLKHGQRSSAPERFV 138
            IKTRKR GLTGT+MQNK++ELFNL DWV PG LG+REHFREFYDEPLKHGQRS+APE FV
Sbjct: 280  IKTRKRIGLTGTVMQNKIIELFNLLDWVAPGSLGSREHFREFYDEPLKHGQRSTAPESFV 339

Query: 137  KIADERKQHXXXXXXXXXXXRTKEETIGHLMMGKEDNVVFCAMSE 3
            + AD+RK+H           RTKEETIGHLMMGKEDNVVFC+MSE
Sbjct: 340  RKADKRKEHLVSVLCKYMLRRTKEETIGHLMMGKEDNVVFCSMSE 384