BLASTX nr result

ID: Bupleurum21_contig00018901 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00018901
         (425 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001060113.1| Os07g0583000 [Oryza sativa Japonica Group] g...    63   3e-08
tpg|DAA63332.1| TPA: membrane protein, partial [Zea mays]              63   3e-08
ref|XP_002463089.1| hypothetical protein SORBIDRAFT_02g037610 [S...    63   3e-08
gb|ACG27218.1| membrane protein [Zea mays] gi|195655705|gb|ACG47...    63   3e-08
ref|XP_003560037.1| PREDICTED: uncharacterized protein LOC100844...    62   6e-08

>ref|NP_001060113.1| Os07g0583000 [Oryza sativa Japonica Group]
           gi|27817834|dbj|BAC55602.1| unknown protein [Oryza
           sativa Japonica Group] gi|50509231|dbj|BAD30501.1|
           unknown protein [Oryza sativa Japonica Group]
           gi|113611649|dbj|BAF22027.1| Os07g0583000 [Oryza sativa
           Japonica Group]
          Length = 67

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 33/64 (51%), Positives = 44/64 (68%), Gaps = 2/64 (3%)
 Frame = -2

Query: 319 MTTSKRLAEKKIAKFEKNIARRGSAVGSWKK--NLTAENIALALFAFVIVGSFLFQIIRL 146
           MTTS+RL+++K+A+FEKN+ +RGS   + KK  +     I L  F FV+VGS LFQIIR 
Sbjct: 1   MTTSRRLSDRKVARFEKNVTKRGSVPETVKKGNDYPVGPIVLGFFVFVVVGSSLFQIIRT 60

Query: 145 AMTA 134
           A  A
Sbjct: 61  AQNA 64


>tpg|DAA63332.1| TPA: membrane protein, partial [Zea mays]
          Length = 118

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 35/64 (54%), Positives = 44/64 (68%), Gaps = 2/64 (3%)
 Frame = -2

Query: 319 MTTSKRLAEKKIAKFEKNIARRGSAVGSWKK--NLTAENIALALFAFVIVGSFLFQIIRL 146
           MTTS+RLA++KIA+FEKNI +RGS   + KK  +     I L  F FV+VGS LFQII+ 
Sbjct: 52  MTTSRRLADRKIARFEKNITKRGSVPETVKKANDYPVGPILLGFFVFVVVGSSLFQIIKT 111

Query: 145 AMTA 134
           A  A
Sbjct: 112 ASNA 115


>ref|XP_002463089.1| hypothetical protein SORBIDRAFT_02g037610 [Sorghum bicolor]
           gi|241926466|gb|EER99610.1| hypothetical protein
           SORBIDRAFT_02g037610 [Sorghum bicolor]
          Length = 67

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 35/64 (54%), Positives = 44/64 (68%), Gaps = 2/64 (3%)
 Frame = -2

Query: 319 MTTSKRLAEKKIAKFEKNIARRGSAVGSWKK--NLTAENIALALFAFVIVGSFLFQIIRL 146
           MTTS+RLA++KIA+FEKNI +RGS   + KK  +     I L  F FV+VGS LFQII+ 
Sbjct: 1   MTTSRRLADRKIARFEKNITKRGSVPETVKKANDYPVGPILLGFFVFVVVGSSLFQIIKT 60

Query: 145 AMTA 134
           A  A
Sbjct: 61  ASNA 64


>gb|ACG27218.1| membrane protein [Zea mays] gi|195655705|gb|ACG47320.1| membrane
           protein [Zea mays]
          Length = 67

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 35/64 (54%), Positives = 44/64 (68%), Gaps = 2/64 (3%)
 Frame = -2

Query: 319 MTTSKRLAEKKIAKFEKNIARRGSAVGSWKK--NLTAENIALALFAFVIVGSFLFQIIRL 146
           MTTS+RLA++KIA+FEKNI +RGS   + KK  +     I L  F FV+VGS LFQII+ 
Sbjct: 1   MTTSRRLADRKIARFEKNITKRGSVPETVKKANDYPVGPILLGFFVFVVVGSSLFQIIKT 60

Query: 145 AMTA 134
           A  A
Sbjct: 61  ASNA 64


>ref|XP_003560037.1| PREDICTED: uncharacterized protein LOC100844128 [Brachypodium
           distachyon]
          Length = 1058

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 33/65 (50%), Positives = 45/65 (69%), Gaps = 2/65 (3%)
 Frame = -2

Query: 319 MTTSKRLAEKKIAKFEKNIARRGSAVGSWKK--NLTAENIALALFAFVIVGSFLFQIIRL 146
           MTTS+R+A++KIA+F+KNI +RGS   + KK  +     I L  F FV+VGS LFQIIR 
Sbjct: 59  MTTSRRVADRKIARFDKNITKRGSVPETVKKGNDYPVGPIVLGFFVFVVVGSSLFQIIRT 118

Query: 145 AMTAE 131
           A + +
Sbjct: 119 ASSGD 123


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