BLASTX nr result

ID: Bupleurum21_contig00018900 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00018900
         (329 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_198883.1| cystinosin [Arabidopsis thaliana] gi|13124057|s...    64   1e-08
gb|AAM63025.1| unknown [Arabidopsis thaliana]                          64   1e-08
ref|XP_002870687.1| PQ-loop repeat family protein [Arabidopsis l...    61   8e-08
ref|XP_002268329.1| PREDICTED: cystinosin homolog [Vitis vinifer...    59   5e-07
ref|XP_002323998.1| predicted protein [Populus trichocarpa] gi|1...    56   3e-06

>ref|NP_198883.1| cystinosin [Arabidopsis thaliana]
           gi|13124057|sp|P57758.1|CTNS_ARATH RecName:
           Full=Cystinosin homolog gi|9758095|dbj|BAB08539.1|
           unnamed protein product [Arabidopsis thaliana]
           gi|15529266|gb|AAK97727.1| AT5g40670/MNF13_190
           [Arabidopsis thaliana] gi|16974419|gb|AAL31135.1|
           AT5g40670/MNF13_190 [Arabidopsis thaliana]
           gi|332007197|gb|AED94580.1| cystinosin [Arabidopsis
           thaliana]
          Length = 270

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 29/51 (56%), Positives = 38/51 (74%)
 Frame = -1

Query: 329 IGKTLLSLVSVFFDILFILQHYVFYPVMKTTKLPTVDVASKKPLIESSDDN 177
           +GKTLLSL+S+FFDILF+ QHYV YP  K +K P     S +PLI+SS ++
Sbjct: 219 MGKTLLSLISIFFDILFMFQHYVLYPEKKVSKSPETGEESNEPLIDSSHEH 269


>gb|AAM63025.1| unknown [Arabidopsis thaliana]
          Length = 270

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 29/51 (56%), Positives = 38/51 (74%)
 Frame = -1

Query: 329 IGKTLLSLVSVFFDILFILQHYVFYPVMKTTKLPTVDVASKKPLIESSDDN 177
           +GKTLLSL+S+FFDILF+ QHYV YP  K +K P     S +PLI+SS ++
Sbjct: 219 MGKTLLSLISIFFDILFMCQHYVLYPEKKVSKSPETSEESNEPLIDSSHEH 269


>ref|XP_002870687.1| PQ-loop repeat family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297316523|gb|EFH46946.1| PQ-loop repeat family
           protein [Arabidopsis lyrata subsp. lyrata]
          Length = 270

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 29/51 (56%), Positives = 37/51 (72%)
 Frame = -1

Query: 329 IGKTLLSLVSVFFDILFILQHYVFYPVMKTTKLPTVDVASKKPLIESSDDN 177
           IGKTLLSL+S+FFDILF+ QHYV YP  K +K       S +PLI+SS ++
Sbjct: 219 IGKTLLSLISIFFDILFMFQHYVLYPEKKASKSLETGEESNEPLIDSSHEH 269


>ref|XP_002268329.1| PREDICTED: cystinosin homolog [Vitis vinifera]
           gi|296081321|emb|CBI17703.3| unnamed protein product
           [Vitis vinifera]
          Length = 274

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 28/49 (57%), Positives = 36/49 (73%)
 Frame = -1

Query: 329 IGKTLLSLVSVFFDILFILQHYVFYPVMKTTKLPTVDVASKKPLIESSD 183
           IGK L+SLVSVFFD++FI QHY+ YP  K  K P +   S++PLI+S D
Sbjct: 219 IGKLLISLVSVFFDLVFISQHYLLYPGKKVGKCPKLGDESREPLIKSVD 267


>ref|XP_002323998.1| predicted protein [Populus trichocarpa] gi|118485298|gb|ABK94508.1|
           unknown [Populus trichocarpa]
           gi|222867000|gb|EEF04131.1| predicted protein [Populus
           trichocarpa]
          Length = 274

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 28/57 (49%), Positives = 39/57 (68%)
 Frame = -1

Query: 329 IGKTLLSLVSVFFDILFILQHYVFYPVMKTTKLPTVDVASKKPLIESSDDNAHVEDV 159
           IGKTLLSLVS+FFD++F+ QHY+ YP  K    P ++    +PLI  S++ A  E+V
Sbjct: 219 IGKTLLSLVSIFFDLVFMCQHYILYPENKAVP-PKLNKEGTEPLIRFSEEPAAPENV 274


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