BLASTX nr result

ID: Bupleurum21_contig00018890 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00018890
         (1100 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002531176.1| nucleic acid binding protein, putative [Rici...   216   8e-54
emb|CAN68511.1| hypothetical protein VITISV_043839 [Vitis vinifera]   212   2e-52
ref|XP_003632719.1| PREDICTED: uncharacterized protein LOC100267...   211   2e-52
ref|XP_002322740.1| predicted protein [Populus trichocarpa] gi|2...   207   4e-51
ref|XP_002309289.1| predicted protein [Populus trichocarpa] gi|2...   196   1e-47

>ref|XP_002531176.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223529246|gb|EEF31219.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 231

 Score =  216 bits (550), Expect = 8e-54
 Identities = 123/241 (51%), Positives = 155/241 (64%), Gaps = 8/241 (3%)
 Frame = +1

Query: 205 MEKKESETRDFISVESFSQLPFTRPMPLKEKSIRLFGKEFGGNQDL--DDSVKTNA-EKE 375
           M+K E ET DF++VESFSQLPF RP P+KEKSIRLFG EFGGN     DDS      E  
Sbjct: 1   MDKSERETHDFMNVESFSQLPFIRPAPVKEKSIRLFGIEFGGNDSAAGDDSASAETNEDN 60

Query: 376 VAENRDDESSRKFECHYCFRNFPTSQALGGHQNAHKRERQNAKRA----AMVHDFHPQAH 543
             E+   +++R+FECHYC RNFPTSQALGGHQNAHKRERQ+AKRA    AMVH+    AH
Sbjct: 61  TKESESGDNNRRFECHYCCRNFPTSQALGGHQNAHKRERQHAKRAHLQSAMVHNSFSDAH 120

Query: 544 VYGMNYQRFGSGLVNSQFTTYNQYSWNRNSAAYDRLYSGYSNNQPHTPPIHGSPLSLWRI 723
           +YGM   R GS    +   +Y  ++ + NS+ +   +  Y        PI+GSPL LWRI
Sbjct: 121 IYGMMNYRIGSNPTPAM--SYPSWNSHANSSRFYGSHGSYPQQ-----PINGSPLGLWRI 173

Query: 724 PSAHGVPKVNHDQFITTHSSPLYSNPEELHRSRNGNPSSQNRYVYQSN-SLKDHVSLDLH 900
           P+ H    ++ D+  + +  PL+S  EEL  S+ G  SSQ RY Y+   S++DHVSLDLH
Sbjct: 174 PTVHSSATLHRDR--SMNPLPLFSG-EELKLSQVGGSSSQGRYGYEGKPSVQDHVSLDLH 230

Query: 901 L 903
           L
Sbjct: 231 L 231


>emb|CAN68511.1| hypothetical protein VITISV_043839 [Vitis vinifera]
          Length = 270

 Score =  212 bits (539), Expect = 2e-52
 Identities = 125/248 (50%), Positives = 162/248 (65%), Gaps = 11/248 (4%)
 Frame = +1

Query: 193 SFSFMEKK-ESETRDFISVESFSQLPFTRPMPLKEKSIRLFGKEFGGNQDLDD---SVKT 360
           S   M+K  E ET DF++VESFSQLPF RP P+KEK IRLFGKEFGG+ D ++   SV+T
Sbjct: 29  SLLLMDKATERETHDFMNVESFSQLPFIRPAPVKEKGIRLFGKEFGGHHDPEEQSESVET 88

Query: 361 NAEKEVAENRDDESSRKFECHYCFRNFPTSQALGGHQNAHKRERQNAKRA----AMVHDF 528
           N  ++V ++ + ES R+FECHYC RNFPTSQALGGHQNAHKRERQ+AKRA    AMVH  
Sbjct: 89  NMCEDVKDSENGESGRRFECHYCCRNFPTSQALGGHQNAHKRERQHAKRAHLQSAMVHSG 148

Query: 529 HPQAHVYGMNYQRFGSGLVNSQFTTYNQYSWNRNSAAYDRLYSGYSNNQPHTPPIHGSPL 708
              AH+YG+   R GS    +   TY   SW   + + +  + G S+     PPI+G+PL
Sbjct: 149 LSDAHMYGLVNYRLGS--APTPPITYP--SWGSQAISSNGRFYG-SHGSFSQPPINGNPL 203

Query: 709 SLWRIP-SAHGVPKVNHDQFITTHSSPLYSNPEELHRSRNGNPSSQNRYVYQSN--SLKD 879
           +LWRIP S    P  + D+  + H  PL++  +    S  G  +SQ+RYVY+S    ++D
Sbjct: 204 ALWRIPASVQTTPTFSRDR-SSHHPLPLFAGDDLKPSSHVGGSTSQSRYVYESTKPGVQD 262

Query: 880 HVSLDLHL 903
           HVSLDLHL
Sbjct: 263 HVSLDLHL 270


>ref|XP_003632719.1| PREDICTED: uncharacterized protein LOC100267595 [Vitis vinifera]
          Length = 238

 Score =  211 bits (538), Expect = 2e-52
 Identities = 122/239 (51%), Positives = 158/239 (66%), Gaps = 10/239 (4%)
 Frame = +1

Query: 217 ESETRDFISVESFSQLPFTRPMPLKEKSIRLFGKEFGGNQDLDD---SVKTNAEKEVAEN 387
           E ET DF++VESFSQLPF RP P+KEK IRLFGKEFGG+ D ++   SV+TN  ++V ++
Sbjct: 6   ERETHDFMNVESFSQLPFIRPAPVKEKGIRLFGKEFGGHHDPEEQSESVETNMCEDVKDS 65

Query: 388 RDDESSRKFECHYCFRNFPTSQALGGHQNAHKRERQNAKRA----AMVHDFHPQAHVYGM 555
            + ES R+FECHYC RNFPTSQALGGHQNAHKRERQ+AKRA    AMVH     AH+YG+
Sbjct: 66  ENGESGRRFECHYCCRNFPTSQALGGHQNAHKRERQHAKRAHLQSAMVHSGLSDAHMYGL 125

Query: 556 NYQRFGSGLVNSQFTTYNQYSWNRNSAAYDRLYSGYSNNQPHTPPIHGSPLSLWRIP-SA 732
              R GS    +   TY   SW   + + +  + G S+     PPI+G+PL+LWRIP S 
Sbjct: 126 VNYRLGS--APTPPITYP--SWGSQAISSNGRFYG-SHGSFSQPPINGNPLALWRIPASV 180

Query: 733 HGVPKVNHDQFITTHSSPLYSNPEELHRSRNGNPSSQNRYVYQSN--SLKDHVSLDLHL 903
              P  + D+  + H  PL++  +    S  G  +SQ+RYVY+S    ++DHVSLDLHL
Sbjct: 181 QTTPTFSRDR-SSHHPLPLFAGDDLKPSSHVGGSTSQSRYVYESTKPGVQDHVSLDLHL 238


>ref|XP_002322740.1| predicted protein [Populus trichocarpa] gi|222867370|gb|EEF04501.1|
           predicted protein [Populus trichocarpa]
          Length = 233

 Score =  207 bits (527), Expect = 4e-51
 Identities = 123/243 (50%), Positives = 155/243 (63%), Gaps = 10/243 (4%)
 Frame = +1

Query: 205 MEKKESETRDFISVESFSQLPFTRPMPLKEKSIRLFGKEFGGNQ-----DLDDSVKTNAE 369
           M+K E ET DF++VESFSQLPF RP P+KEK IRLFG EFG N+     D  DS +TN E
Sbjct: 1   MDKVERETHDFMNVESFSQLPFIRPAPIKEKGIRLFGIEFGSNKESPAADESDSAETN-E 59

Query: 370 KEVAENRDDESSRKFECHYCFRNFPTSQALGGHQNAHKRERQNAKRA----AMVHDFHPQ 537
               EN   +++R+FECHYC RNFPTSQALGGHQNAHKRERQ+AKRA    AM+H+    
Sbjct: 60  DAAKENESSDNNRRFECHYCCRNFPTSQALGGHQNAHKRERQHAKRAHLQSAMIHNSLSD 119

Query: 538 AHVYGMNYQRFGSGLVNSQFTTYNQYSWNRNSAAYDRLYSGYSNNQPHTPPIHGSPLSLW 717
           AH YG+   R  S  +++   T+   SWN +++  +R Y G  +      PI+GSPL LW
Sbjct: 120 AHYYGILNYRIDS--ISTAAMTHP--SWNSHTST-NRYYGGQGSYSQQ--PINGSPLGLW 172

Query: 718 RIPSAHGVPKVNHDQFITTHSSPLYSNPEELHRSRNGNPSSQNRYVYQS-NSLKDHVSLD 894
           RIP+ HG   + H    + H  P +S  E L  S  G  SS  RY Y+S +S++D VSLD
Sbjct: 173 RIPAVHGSATLQHPD-RSVHPLPSFSG-EGLKPSPAGGSSSHGRYGYESKSSVQDRVSLD 230

Query: 895 LHL 903
           LHL
Sbjct: 231 LHL 233


>ref|XP_002309289.1| predicted protein [Populus trichocarpa] gi|222855265|gb|EEE92812.1|
           predicted protein [Populus trichocarpa]
          Length = 215

 Score =  196 bits (497), Expect = 1e-47
 Identities = 117/240 (48%), Positives = 143/240 (59%), Gaps = 7/240 (2%)
 Frame = +1

Query: 205 MEKKESETRDFISVESFSQLPFTRPMPLKEKSIRLFGKEFGGNQDL-----DDSVKTNAE 369
           M+K E ET DF++VESFSQLPF RP P+KEK IRLFG EFG N D       +S +TN E
Sbjct: 1   MDKVERETHDFMNVESFSQLPFIRPAPVKEKGIRLFGIEFGSNNDSPAADESESAETN-E 59

Query: 370 KEVAENRDDESSRKFECHYCFRNFPTSQALGGHQNAHKRERQNAKRAAMVHDFHPQAHVY 549
             V E+   +++R+FECHYC RNFPTSQALGGHQNAHKRERQ+AKRA +  D  P     
Sbjct: 60  DTVKESESSDNNRRFECHYCCRNFPTSQALGGHQNAHKRERQHAKRAHLQIDSTP----- 114

Query: 550 GMNYQRFGSGLVNSQFTTYNQYSWNRNSAAYDRLYSGYSNNQPHTPPIHGSPLSLWRIPS 729
                        S   TY  ++ + N++ +   +  YS       PI+GSPL LWRIP+
Sbjct: 115 -------------SSAMTYPSWNSHSNTSRFYGSHGSYSQQ-----PINGSPLGLWRIPA 156

Query: 730 AHGVPKVNHDQFITTHSSPLYSNPEELHRSRNG-NPSSQNRYVYQSN-SLKDHVSLDLHL 903
            HG    +H      H  PL++  EEL  S  G   SSQ RY Y S  S +DHVSLDLHL
Sbjct: 157 VHGGGTFHHSDRSMHHPLPLFAG-EELKPSPAGTGSSSQGRYGYDSKPSAQDHVSLDLHL 215


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