BLASTX nr result

ID: Bupleurum21_contig00018850 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00018850
         (325 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI31237.3| unnamed protein product [Vitis vinifera]               75   6e-12
ref|XP_002271046.1| PREDICTED: 3-isopropylmalate dehydratase-lik...    75   6e-12
ref|XP_002528344.1| 3-isopropylmalate dehydratase, putative [Ric...    74   1e-11
ref|XP_002285491.1| PREDICTED: 3-isopropylmalate dehydratase [Vi...    70   1e-10
ref|XP_004148369.1| PREDICTED: 3-isopropylmalate dehydratase-lik...    64   1e-08

>emb|CBI31237.3| unnamed protein product [Vitis vinifera]
          Length = 528

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 43/66 (65%), Positives = 47/66 (71%), Gaps = 1/66 (1%)
 Frame = -3

Query: 197 QKDVGLSAFSPK-TSFYLPXXXXXXXXXXXXVMAPQQSERKPSTTGSVKTGMTMTEKILA 21
           +KDVGLSAFS   +SF +P            VMAPQQS R PSTTGSVKT MTMTEKILA
Sbjct: 15  KKDVGLSAFSSSPSSFSVPKTKRRNSRKIVSVMAPQQSPRSPSTTGSVKTAMTMTEKILA 74

Query: 20  RASEKP 3
           RAS+KP
Sbjct: 75  RASQKP 80


>ref|XP_002271046.1| PREDICTED: 3-isopropylmalate dehydratase-like [Vitis vinifera]
          Length = 508

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 43/66 (65%), Positives = 47/66 (71%), Gaps = 1/66 (1%)
 Frame = -3

Query: 197 QKDVGLSAFSPK-TSFYLPXXXXXXXXXXXXVMAPQQSERKPSTTGSVKTGMTMTEKILA 21
           +KDVGLSAFS   +SF +P            VMAPQQS R PSTTGSVKT MTMTEKILA
Sbjct: 15  KKDVGLSAFSSSPSSFSVPKTKRRNSRKIVSVMAPQQSPRSPSTTGSVKTAMTMTEKILA 74

Query: 20  RASEKP 3
           RAS+KP
Sbjct: 75  RASQKP 80


>ref|XP_002528344.1| 3-isopropylmalate dehydratase, putative [Ricinus communis]
           gi|223532212|gb|EEF34016.1| 3-isopropylmalate
           dehydratase, putative [Ricinus communis]
          Length = 510

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 44/68 (64%), Positives = 50/68 (73%), Gaps = 2/68 (2%)
 Frame = -3

Query: 203 INQKDVGLSAFSPKTS-FY-LPXXXXXXXXXXXXVMAPQQSERKPSTTGSVKTGMTMTEK 30
           I +KD+GLSAFS ++S FY +P            VMAPQQSER P+TTGSVKT MTMTEK
Sbjct: 14  ITKKDLGLSAFSSQSSPFYSIPKCKKSISKKVVSVMAPQQSERTPATTGSVKTAMTMTEK 73

Query: 29  ILARASEK 6
           ILARASEK
Sbjct: 74  ILARASEK 81


>ref|XP_002285491.1| PREDICTED: 3-isopropylmalate dehydratase [Vitis vinifera]
           gi|296083736|emb|CBI23725.3| unnamed protein product
           [Vitis vinifera]
          Length = 508

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 42/70 (60%), Positives = 46/70 (65%), Gaps = 1/70 (1%)
 Frame = -3

Query: 209 PLINQKDVGLSAFSPK-TSFYLPXXXXXXXXXXXXVMAPQQSERKPSTTGSVKTGMTMTE 33
           P   +KDV LSAFS   +SF +             VMAPQQS R PST+GSVKT MTMTE
Sbjct: 11  PAFIKKDVDLSAFSSSASSFSIQKTNKRNSRKIVSVMAPQQSPRSPSTSGSVKTAMTMTE 70

Query: 32  KILARASEKP 3
           KILARASEKP
Sbjct: 71  KILARASEKP 80


>ref|XP_004148369.1| PREDICTED: 3-isopropylmalate dehydratase-like [Cucumis sativus]
           gi|449505250|ref|XP_004162416.1| PREDICTED:
           3-isopropylmalate dehydratase-like [Cucumis sativus]
          Length = 510

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 35/67 (52%), Positives = 42/67 (62%)
 Frame = -3

Query: 206 LINQKDVGLSAFSPKTSFYLPXXXXXXXXXXXXVMAPQQSERKPSTTGSVKTGMTMTEKI 27
           L N+KD+ ++AFS    F               VM PQQSERKPS +GSVKT MTMTEKI
Sbjct: 15  LTNKKDLDVAAFSSSLPFSYRRCERTVSKKICSVMTPQQSERKPSASGSVKTAMTMTEKI 74

Query: 26  LARASEK 6
            A+AS+K
Sbjct: 75  FAKASQK 81


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