BLASTX nr result
ID: Bupleurum21_contig00018807
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Bupleurum21_contig00018807 (353 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AFL91220.1| cell wall protein, partial [Helianthus annuus] gi... 77 1e-12 gb|AFL91222.1| cell wall protein, partial [Helianthus annuus] 77 1e-12 gb|AFL91221.1| cell wall protein, partial [Helianthus annuus] 77 1e-12 gb|AFL91218.1| cell wall protein, partial [Helianthus annuus] gi... 77 1e-12 ref|XP_002886312.1| hypothetical protein ARALYDRAFT_900466 [Arab... 76 2e-12 >gb|AFL91220.1| cell wall protein, partial [Helianthus annuus] gi|390430815|gb|AFL91225.1| cell wall protein, partial [Helianthus annuus] Length = 87 Score = 77.4 bits (189), Expect = 1e-12 Identities = 41/82 (50%), Positives = 52/82 (63%), Gaps = 2/82 (2%) Frame = -3 Query: 285 LIPGVGRVMVPPKKKCFHKGFNPFTYNPVTGTNTGHGVSVPTLPAPTTGG-SVPRYIPGG 109 LIPGVGR + P ++GFNP TYNP+TG+N G P + P+ GG Y+PGG Sbjct: 8 LIPGVGRGITPKP----NEGFNPVTYNPITGSNNGF----PGITVPSVGGLGGGNYLPGG 59 Query: 108 DDTPVPNPGFEVP-TGALPSPP 46 DDT +PNPGFEVP G + + P Sbjct: 60 DDTLIPNPGFEVPIPGGIDNTP 81 >gb|AFL91222.1| cell wall protein, partial [Helianthus annuus] Length = 91 Score = 77.0 bits (188), Expect = 1e-12 Identities = 39/73 (53%), Positives = 48/73 (65%), Gaps = 1/73 (1%) Frame = -3 Query: 285 LIPGVGRVMVPPKKKCFHKGFNPFTYNPVTGTNTGHGVSVPTLPAPTTGG-SVPRYIPGG 109 LIPGVGR + P ++GFNP TYNP+TG+N G P + P+ GG Y+PGG Sbjct: 11 LIPGVGRGITPKP----NEGFNPVTYNPITGSNNGF----PGITVPSVGGLGGGNYLPGG 62 Query: 108 DDTPVPNPGFEVP 70 DDT +PNPGFEVP Sbjct: 63 DDTLIPNPGFEVP 75 >gb|AFL91221.1| cell wall protein, partial [Helianthus annuus] Length = 88 Score = 77.0 bits (188), Expect = 1e-12 Identities = 39/73 (53%), Positives = 48/73 (65%), Gaps = 1/73 (1%) Frame = -3 Query: 285 LIPGVGRVMVPPKKKCFHKGFNPFTYNPVTGTNTGHGVSVPTLPAPTTGG-SVPRYIPGG 109 LIPGVGR + P ++GFNP TYNP+TG+N G P + P+ GG Y+PGG Sbjct: 8 LIPGVGRGITPKP----NEGFNPVTYNPITGSNNGF----PGITVPSVGGLGGGNYLPGG 59 Query: 108 DDTPVPNPGFEVP 70 DDT +PNPGFEVP Sbjct: 60 DDTLIPNPGFEVP 72 >gb|AFL91218.1| cell wall protein, partial [Helianthus annuus] gi|390430813|gb|AFL91224.1| cell wall protein, partial [Helianthus annuus] Length = 91 Score = 77.0 bits (188), Expect = 1e-12 Identities = 39/73 (53%), Positives = 48/73 (65%), Gaps = 1/73 (1%) Frame = -3 Query: 285 LIPGVGRVMVPPKKKCFHKGFNPFTYNPVTGTNTGHGVSVPTLPAPTTGG-SVPRYIPGG 109 LIPGVGR + P ++GFNP TYNP+TG+N G P + P+ GG Y+PGG Sbjct: 11 LIPGVGRGITPKP----NEGFNPVTYNPITGSNNGF----PGITVPSVGGLGGGNYLPGG 62 Query: 108 DDTPVPNPGFEVP 70 DDT +PNPGFEVP Sbjct: 63 DDTLIPNPGFEVP 75 >ref|XP_002886312.1| hypothetical protein ARALYDRAFT_900466 [Arabidopsis lyrata subsp. lyrata] gi|297332152|gb|EFH62571.1| hypothetical protein ARALYDRAFT_900466 [Arabidopsis lyrata subsp. lyrata] Length = 140 Score = 76.3 bits (186), Expect = 2e-12 Identities = 48/105 (45%), Positives = 56/105 (53%), Gaps = 14/105 (13%) Frame = -3 Query: 339 PKDVDKKQPE---TYTQEGSVLIPGVGRVMVPPKKKCFHKGFNPFTYNPVTGTNTGHGVS 169 PK D K P+ T + ++LIPGVGR ++PPK K K F P YNPVTG Sbjct: 35 PKTTDVKHPDFLVTIEPKPTILIPGVGRFLLPPKCK---KPFYP--YNPVTG-------- 81 Query: 168 VPTLPAPTTGGSVPRY-----------IPGGDDTPVPNPGFEVPT 67 AP TGG +P Y +PGGDDT VPNPGFE PT Sbjct: 82 -----APLTGGGIPSYNGGQGAGPRTQLPGGDDTLVPNPGFEAPT 121