BLASTX nr result

ID: Bupleurum21_contig00018804 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00018804
         (273 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002299597.1| predicted protein [Populus trichocarpa] gi|2...    60   2e-07
ref|XP_003528451.1| PREDICTED: uncharacterized protein LOC100807...    58   7e-07
ref|XP_002274314.2| PREDICTED: uncharacterized protein LOC100248...    55   5e-06
emb|CBI35892.3| unnamed protein product [Vitis vinifera]               55   5e-06
emb|CAN69468.1| hypothetical protein VITISV_042555 [Vitis vinifera]    55   5e-06

>ref|XP_002299597.1| predicted protein [Populus trichocarpa] gi|222846855|gb|EEE84402.1|
           predicted protein [Populus trichocarpa]
          Length = 775

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 31/73 (42%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
 Frame = -2

Query: 218 LSSIPVSRPSVNNQYVNKQHQ-FVGHQKAXXXXXXXXXXXXXXXXXSDPGVIGTPAKSAS 42
           + S+PV+R  +NNQY N+ HQ  VGH KA                 + PGVIGTP KS+S
Sbjct: 257 MPSVPVNRSFLNNQYNNRPHQQAVGHPKASQHNKEWKPKSSQKSSVTSPGVIGTPTKSSS 316

Query: 41  PPADALKNLKTES 3
           PP D  KN++ ++
Sbjct: 317 PPTDNSKNMELDA 329


>ref|XP_003528451.1| PREDICTED: uncharacterized protein LOC100807606 [Glycine max]
          Length = 863

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 33/71 (46%), Positives = 41/71 (57%), Gaps = 5/71 (7%)
 Frame = -2

Query: 227 ETTLSSIPVSRPSVNNQYVNKQH-QFVGHQKAXXXXXXXXXXXXXXXXXSDPGVIGTPAK 51
           E +LS +PVSRPS+NNQY N+ H Q VGHQ+                  + PGVIGTP K
Sbjct: 333 EPSLSGMPVSRPSLNNQYNNRPHQQLVGHQRVSQQNKEWKPKSSQKPNSNSPGVIGTPKK 392

Query: 50  ----SASPPAD 30
               +ASPPA+
Sbjct: 393 AAVAAASPPAE 403


>ref|XP_002274314.2| PREDICTED: uncharacterized protein LOC100248075 [Vitis vinifera]
          Length = 860

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 32/73 (43%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
 Frame = -2

Query: 218 LSSIPVSRPSVNNQYVNKQHQF-VGHQKAXXXXXXXXXXXXXXXXXSDPGVIGTPAKSAS 42
           + S+PV+R  + NQY ++ HQ  VGHQKA                   PGVIGTPAKS S
Sbjct: 340 IPSMPVNRSFLGNQYGSRPHQQPVGHQKAPQPNKEWKPKSSQKSSHIIPGVIGTPAKSVS 399

Query: 41  PPADALKNLKTES 3
           P AD  K+L++E+
Sbjct: 400 PRADNSKDLESET 412


>emb|CBI35892.3| unnamed protein product [Vitis vinifera]
          Length = 809

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 32/73 (43%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
 Frame = -2

Query: 218 LSSIPVSRPSVNNQYVNKQHQF-VGHQKAXXXXXXXXXXXXXXXXXSDPGVIGTPAKSAS 42
           + S+PV+R  + NQY ++ HQ  VGHQKA                   PGVIGTPAKS S
Sbjct: 289 IPSMPVNRSFLGNQYGSRPHQQPVGHQKAPQPNKEWKPKSSQKSSHIIPGVIGTPAKSVS 348

Query: 41  PPADALKNLKTES 3
           P AD  K+L++E+
Sbjct: 349 PRADNSKDLESET 361


>emb|CAN69468.1| hypothetical protein VITISV_042555 [Vitis vinifera]
          Length = 914

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 32/73 (43%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
 Frame = -2

Query: 218 LSSIPVSRPSVNNQYVNKQHQF-VGHQKAXXXXXXXXXXXXXXXXXSDPGVIGTPAKSAS 42
           + S+PV+R  + NQY ++ HQ  VGHQKA                   PGVIGTPAKS S
Sbjct: 394 IPSMPVNRSFLGNQYGSRPHQQPVGHQKAPQPNKEWKPKSSQKSSHIIPGVIGTPAKSVS 453

Query: 41  PPADALKNLKTES 3
           P AD  K+L++E+
Sbjct: 454 PRADNSKDLESET 466


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