BLASTX nr result

ID: Bupleurum21_contig00018787 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00018787
         (327 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003533689.1| PREDICTED: sacsin-like [Glycine max]              149   2e-34
ref|XP_002307173.1| predicted protein [Populus trichocarpa] gi|2...   149   2e-34
ref|XP_004158223.1| PREDICTED: LOW QUALITY PROTEIN: sacsin-like ...   145   3e-33
ref|XP_004135955.1| PREDICTED: uncharacterized protein LOC101212...   145   3e-33
ref|XP_002527141.1| protein binding protein, putative [Ricinus c...   145   3e-33

>ref|XP_003533689.1| PREDICTED: sacsin-like [Glycine max]
          Length = 4760

 Score =  149 bits (376), Expect = 2e-34
 Identities = 79/111 (71%), Positives = 89/111 (80%), Gaps = 2/111 (1%)
 Frame = +1

Query: 1    ILSRMATRKGHVPLDSQEIRAALLVAQHLAEVQLYEDRIKIFLPDLSCRLVDATDLVYND 180
            IL RMA RKG  PLD+QEIRAA L+  HLAEV  +E +++++LPD+S RL  A DLVYND
Sbjct: 1250 ILCRMAVRKGSSPLDTQEIRAATLIVHHLAEVYHHEHKVQLYLPDVSGRLFLAGDLVYND 1309

Query: 181  APWLLGSED--NLFSNASTVALTAKRTVQKFVHGNISNDVAEKLGVRSLRR 327
            APWLLGS+D    F NA TVAL AKRTVQKFVHGNISNDVAEKLGV SLRR
Sbjct: 1310 APWLLGSDDPKGSFGNAPTVALNAKRTVQKFVHGNISNDVAEKLGVCSLRR 1360


>ref|XP_002307173.1| predicted protein [Populus trichocarpa] gi|222856622|gb|EEE94169.1|
            predicted protein [Populus trichocarpa]
          Length = 2870

 Score =  149 bits (376), Expect = 2e-34
 Identities = 80/111 (72%), Positives = 91/111 (81%), Gaps = 2/111 (1%)
 Frame = +1

Query: 1    ILSRMATRKGHVPLDSQEIRAALLVAQHLAEVQLYEDRIKIFLPDLSCRLVDATDLVYND 180
            IL RMA RK   PLD+QEIRAA+L+ QHLAEVQ +E ++KI+LPD+S RL  ATDLVYND
Sbjct: 1266 ILGRMAVRKASSPLDAQEIRAAMLIVQHLAEVQFHE-QVKIYLPDVSGRLFPATDLVYND 1324

Query: 181  APWLLGSE--DNLFSNASTVALTAKRTVQKFVHGNISNDVAEKLGVRSLRR 327
            APWLLGS+  D+ F  ASTVAL AKR V KFVHGNISN+VAEKLGV SLRR
Sbjct: 1325 APWLLGSDNSDSSFGGASTVALHAKRAVHKFVHGNISNEVAEKLGVCSLRR 1375


>ref|XP_004158223.1| PREDICTED: LOW QUALITY PROTEIN: sacsin-like [Cucumis sativus]
          Length = 3586

 Score =  145 bits (366), Expect = 3e-33
 Identities = 75/111 (67%), Positives = 88/111 (79%), Gaps = 2/111 (1%)
 Frame = +1

Query: 1    ILSRMATRKGHVPLDSQEIRAALLVAQHLAEVQLYEDRIKIFLPDLSCRLVDATDLVYND 180
            ILSRMATRKG  PL++QE+RAA+L+ QHLAE QL + +I I LPD+SCRL  A +LVYND
Sbjct: 1257 ILSRMATRKGSSPLNTQEVRAAILIVQHLAEAQLPQQQIDIHLPDISCRLFPAKNLVYND 1316

Query: 181  APWLLGSE--DNLFSNASTVALTAKRTVQKFVHGNISNDVAEKLGVRSLRR 327
            APWLLG++  D  F   S   L A++TVQKFVHGNISNDVAEKLGV SLRR
Sbjct: 1317 APWLLGTDNTDVSFDGGSAAFLNARKTVQKFVHGNISNDVAEKLGVCSLRR 1367


>ref|XP_004135955.1| PREDICTED: uncharacterized protein LOC101212447 [Cucumis sativus]
          Length = 4709

 Score =  145 bits (366), Expect = 3e-33
 Identities = 75/111 (67%), Positives = 88/111 (79%), Gaps = 2/111 (1%)
 Frame = +1

Query: 1    ILSRMATRKGHVPLDSQEIRAALLVAQHLAEVQLYEDRIKIFLPDLSCRLVDATDLVYND 180
            ILSRMATRKG  PL++QE+RAA+L+ QHLAE QL + +I I LPD+SCRL  A +LVYND
Sbjct: 1257 ILSRMATRKGSSPLNTQEVRAAILIVQHLAEAQLPQQQIDIHLPDISCRLFPAKNLVYND 1316

Query: 181  APWLLGSE--DNLFSNASTVALTAKRTVQKFVHGNISNDVAEKLGVRSLRR 327
            APWLLG++  D  F   S   L A++TVQKFVHGNISNDVAEKLGV SLRR
Sbjct: 1317 APWLLGTDNTDVSFDGGSAAFLNARKTVQKFVHGNISNDVAEKLGVCSLRR 1367


>ref|XP_002527141.1| protein binding protein, putative [Ricinus communis]
            gi|223533501|gb|EEF35243.1| protein binding protein,
            putative [Ricinus communis]
          Length = 4704

 Score =  145 bits (366), Expect = 3e-33
 Identities = 75/110 (68%), Positives = 89/110 (80%), Gaps = 1/110 (0%)
 Frame = +1

Query: 1    ILSRMATRKGHVPLDSQEIRAALLVAQHLAEVQLYEDRIKIFLPDLSCRLVDATDLVYND 180
            IL+RMA RKG  PLD QE+RAA+++ QHLAEVQ +   +KI+LPD+S RL    DLVYND
Sbjct: 1257 ILARMALRKGSCPLDVQEVRAAVMIVQHLAEVQFHAQEVKIYLPDISGRLFPPNDLVYND 1316

Query: 181  APWLLGSEDNLFS-NASTVALTAKRTVQKFVHGNISNDVAEKLGVRSLRR 327
            APWLLGS+ +  +  AS+VAL AKRTVQKFVHGNISN+VAEKLGV SLRR
Sbjct: 1317 APWLLGSDISASTFGASSVALNAKRTVQKFVHGNISNEVAEKLGVCSLRR 1366



 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 38/113 (33%), Positives = 57/113 (50%), Gaps = 5/113 (4%)
 Frame = +1

Query: 1    ILSRMATRKGHVPLDSQEIRAALLVAQHLAEVQL----YED-RIKIFLPDLSCRLVDATD 165
            +L R+       PL + ++     V + +A+  L    +ED    + +PD S  L+ + D
Sbjct: 2689 VLQRLQNDVKGCPLSTDQLSFVQCVLEAVADCSLDNPLFEDSNTSLLMPDSSGILMCSRD 2748

Query: 166  LVYNDAPWLLGSEDNLFSNASTVALTAKRTVQKFVHGNISNDVAEKLGVRSLR 324
            L+YNDAPW+              AL  K     FVH +ISND+A +LGV+SLR
Sbjct: 2749 LIYNDAPWI-----------ENCALVGKH----FVHPSISNDLANRLGVKSLR 2786


Top