BLASTX nr result

ID: Bupleurum21_contig00018764 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00018764
         (554 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN62906.1| hypothetical protein VITISV_043610 [Vitis vinifera]   130   1e-28
emb|CAN81001.1| hypothetical protein VITISV_006992 [Vitis vinifera]   129   3e-28
emb|CAN74230.1| hypothetical protein VITISV_000585 [Vitis vinifera]   126   2e-27
emb|CAN74819.1| hypothetical protein VITISV_034590 [Vitis vinifera]   125   4e-27
dbj|BAB08885.1| retroelement pol polyprotein-like [Arabidopsis t...   125   6e-27

>emb|CAN62906.1| hypothetical protein VITISV_043610 [Vitis vinifera]
          Length = 1498

 Score =  130 bits (327), Expect = 1e-28
 Identities = 70/182 (38%), Positives = 108/182 (59%), Gaps = 3/182 (1%)
 Frame = +2

Query: 14  IDKLQGSSNYRSWKRSMEIALSSKRKLGFVTGSITKDVTDSVKGEA---WDTCNNMIISW 184
           I K     NY +WKR+M +AL+SK KLGFV GSI K  ++ +  E    W  CN+M+ SW
Sbjct: 32  ISKSLNGDNYSAWKRAMILALNSKNKLGFVNGSI-KAPSEEIDPEGYATWSRCNDMVHSW 90

Query: 185 IFGSVSESIKKSIMFVSIAHQIWNNLEQRFALTNGSRKYKLNKDLYETRQQGKQVSEYYT 364
           I  +++  I  S+++ S AH++W +L +RF+ +N  R +++ +D+   RQ+   VS YYT
Sbjct: 91  IVNTLNPEIANSVIYYSTAHEVWEDLCERFSQSNAPRIFEIQRDIACLRQEQLSVSAYYT 150

Query: 365 QMRILWEELESLNTLPVITTVNPEVTSLISALTQQREEQKLFQFLNGLDEIYGPQRSQLL 544
           +++ LW+EL S N                +A   Q+++QKL QFL GL+E Y   R Q+L
Sbjct: 151 KLKGLWDELASYNA---------------AAHGAQQDQQKLMQFLMGLNESYSVIRGQIL 195

Query: 545 MM 550
           +M
Sbjct: 196 LM 197


>emb|CAN81001.1| hypothetical protein VITISV_006992 [Vitis vinifera]
          Length = 1131

 Score =  129 bits (324), Expect = 3e-28
 Identities = 64/183 (34%), Positives = 105/183 (57%), Gaps = 4/183 (2%)
 Frame = +2

Query: 14  IDKLQGSSNYRSWKRSMEIALSSKRKLGFVTGSITKDVTDSVKGEAWDTCNNMIISWIFG 193
           + K+    NY +W R+M I+LS+K K+GFVTGSI    +      +W  CN+M+ISW+  
Sbjct: 31  VSKVLEGDNYSTWSRAMRISLSAKDKIGFVTGSIKPPSSTDDSFPSWQRCNDMVISWLLN 90

Query: 194 SVSESIKKSIMFVSIAHQIWNNLEQRFALTNGSRKYKLNKDLYETRQQGKQVSEYYTQMR 373
           S+   I  S+++     +IW +L +RF+  N SR Y++ +D+ E RQ  + +S YYT+++
Sbjct: 91  SIHPDIASSVIYAETTSEIWADLRERFSQGNDSRIYQIKRDIVEHRQGQQSISVYYTKLK 150

Query: 374 ILWEELESLNTLPVITTVNPEVTSL----ISALTQQREEQKLFQFLNGLDEIYGPQRSQL 541
             W+EL S +          EV S     +  L +  E++++ QFL GL++ Y   R Q+
Sbjct: 151 AFWDELSSYH----------EVLSCSCGGLEKLKEMDEKERVMQFLMGLNDSYAAIRGQI 200

Query: 542 LMM 550
           L+M
Sbjct: 201 LLM 203


>emb|CAN74230.1| hypothetical protein VITISV_000585 [Vitis vinifera]
          Length = 334

 Score =  126 bits (317), Expect = 2e-27
 Identities = 64/183 (34%), Positives = 106/183 (57%), Gaps = 4/183 (2%)
 Frame = +2

Query: 14  IDKLQGSSNYRSWKRSMEIALSSKRKLGFVTGSITKDVTDSVKGEAWDTCNNMIISWIFG 193
           + K+    NY +W R+M I+LS+K K+GFVTGSI    +      +W  CN+M+ISW+  
Sbjct: 34  VSKVLEGDNYSTWSRAMRISLSAKDKIGFVTGSIKPPSSTDDSFPSWQRCNDMVISWLLN 93

Query: 194 SVSESIKKSIMFVSIAHQIWNNLEQRFALTNGSRKYKLNKDLYETRQQGKQVSEYYTQMR 373
           S+   I  S+++   A +IW +L +RF+  N SR Y++ +D+ E RQ  + +S YYT+++
Sbjct: 94  SIHPDIASSVIYAETASEIWADLRERFSQGNDSRIYQIKRDIVEHRQGQQSISVYYTKLK 153

Query: 374 ILWEELESLNTLPVITTVNPEVTSL----ISALTQQREEQKLFQFLNGLDEIYGPQRSQL 541
              +EL S +          EV S     +  L ++ E++++ QFL GL++ Y   R Q+
Sbjct: 154 AFXDELSSYH----------EVLSCSCGGLEKLKERDEKERVMQFLMGLNDSYAAIRGQI 203

Query: 542 LMM 550
           L+M
Sbjct: 204 LLM 206


>emb|CAN74819.1| hypothetical protein VITISV_034590 [Vitis vinifera]
          Length = 970

 Score =  125 bits (314), Expect = 4e-27
 Identities = 63/172 (36%), Positives = 99/172 (57%)
 Frame = +2

Query: 35  SNYRSWKRSMEIALSSKRKLGFVTGSITKDVTDSVKGEAWDTCNNMIISWIFGSVSESIK 214
           +NY +W R+M +AL++K K+ F+ GSI    +D +    W  CN+M+ISWI  SV + I 
Sbjct: 48  ANYNTWSRAMVMALTAKNKISFIDGSIPCPESDDLLFGTWIRCNSMVISWILNSVHKDIA 107

Query: 215 KSIMFVSIAHQIWNNLEQRFALTNGSRKYKLNKDLYETRQQGKQVSEYYTQMRILWEELE 394
            S+++   A  IWN+L  RF  +NG R +++ K L    Q    VS YYT+++ILW+EL+
Sbjct: 108 DSLLYFDTAVGIWNDLRDRFCQSNGPRIFQIKKHLIALSQGSLDVSTYYTRLKILWDELK 167

Query: 395 SLNTLPVITTVNPEVTSLISALTQQREEQKLFQFLNGLDEIYGPQRSQLLMM 550
               LP            +    + ++++ + QFL GL+E +   RSQ+LMM
Sbjct: 168 GFQPLPEC------ACGTMKTWMEFQQQEYVMQFLMGLNESFVQTRSQILMM 213


>dbj|BAB08885.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
          Length = 370

 Score =  125 bits (313), Expect = 6e-27
 Identities = 61/158 (38%), Positives = 98/158 (62%)
 Frame = +2

Query: 38  NYRSWKRSMEIALSSKRKLGFVTGSITKDVTDSVKGEAWDTCNNMIISWIFGSVSESIKK 217
           NY  W   M  AL +KRK GF+ G+I K  +DS   E W T N+MI+ WI  S+   +K 
Sbjct: 51  NYNEWSEEMLNALQAKRKTGFIDGTIQKPASDSPDFENWKTVNSMIVGWIRVSIEPKVKS 110

Query: 218 SIMFVSIAHQIWNNLEQRFALTNGSRKYKLNKDLYETRQQGKQVSEYYTQMRILWEELES 397
           ++ F+S AH +W+ L QRF++TN  R +++   L   RQ+G+ V +YY ++  LW+EL++
Sbjct: 111 TVTFISDAHLLWDELRQRFSVTNNVRVHQIKAQLASCRQEGQTVIDYYGRLCNLWDELKN 170

Query: 398 LNTLPVITTVNPEVTSLISALTQQREEQKLFQFLNGLD 511
                  + V P   S+++A+ ++R+++KL QF+ GLD
Sbjct: 171 YQA----SAVCPH-GSVLTAIVKERDDEKLHQFVLGLD 203


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