BLASTX nr result

ID: Bupleurum21_contig00018752 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00018752
         (334 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001118559.1| uncharacterized protein [Arabidopsis thalian...    94   1e-17
gb|ABK28123.1| unknown [Arabidopsis thaliana]                          93   2e-17
gb|ABF59464.1| unknown protein [Arabidopsis thaliana]                  93   2e-17
ref|XP_003569447.1| PREDICTED: uncharacterized protein LOC100828...    92   3e-17
ref|XP_002873830.1| hypothetical protein ARALYDRAFT_909742 [Arab...    92   3e-17

>ref|NP_001118559.1| uncharacterized protein [Arabidopsis thaliana]
           gi|297832980|ref|XP_002884372.1| hypothetical protein
           ARALYDRAFT_477584 [Arabidopsis lyrata subsp. lyrata]
           gi|98962219|gb|ABF59439.1| unknown protein [Arabidopsis
           thaliana] gi|297330212|gb|EFH60631.1| hypothetical
           protein ARALYDRAFT_477584 [Arabidopsis lyrata subsp.
           lyrata] gi|332640411|gb|AEE73932.1| uncharacterized
           protein [Arabidopsis thaliana]
          Length = 72

 Score = 93.6 bits (231), Expect = 1e-17
 Identities = 44/72 (61%), Positives = 47/72 (65%)
 Frame = +1

Query: 40  VIMLCVQCGTNSNPCRCKVVGPTLGLXXXXXXXXXXXXXXXXXYIFKHVKGRRIMGHPVR 219
           +I +CVQCGT  NPCRCKVVGPTLGL                 YIFKH KGRRIMGHP  
Sbjct: 1   MIPICVQCGTGGNPCRCKVVGPTLGLVAFVAAGIVEWPVGALVYIFKHAKGRRIMGHPAT 60

Query: 220 VVYPKVNRCIPI 255
            VYPKV+R IPI
Sbjct: 61  HVYPKVSRSIPI 72


>gb|ABK28123.1| unknown [Arabidopsis thaliana]
          Length = 74

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 44/72 (61%), Positives = 45/72 (62%)
 Frame = +1

Query: 40  VIMLCVQCGTNSNPCRCKVVGPTLGLXXXXXXXXXXXXXXXXXYIFKHVKGRRIMGHPVR 219
           V   CVQCGT  NPCRCKVVGPTLG                  YIFKH KGRRIMGHP R
Sbjct: 2   VFPACVQCGTRQNPCRCKVVGPTLGFVAFLITGIIEWPVGAVVYIFKHAKGRRIMGHPAR 61

Query: 220 VVYPKVNRCIPI 255
            VYPKV+R IPI
Sbjct: 62  KVYPKVSRSIPI 73


>gb|ABF59464.1| unknown protein [Arabidopsis thaliana]
          Length = 73

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 44/72 (61%), Positives = 45/72 (62%)
 Frame = +1

Query: 40  VIMLCVQCGTNSNPCRCKVVGPTLGLXXXXXXXXXXXXXXXXXYIFKHVKGRRIMGHPVR 219
           V   CVQCGT  NPCRCKVVGPTLG                  YIFKH KGRRIMGHP R
Sbjct: 2   VFPACVQCGTRQNPCRCKVVGPTLGFVAFLITGIIEWPVGAVVYIFKHAKGRRIMGHPAR 61

Query: 220 VVYPKVNRCIPI 255
            VYPKV+R IPI
Sbjct: 62  KVYPKVSRSIPI 73


>ref|XP_003569447.1| PREDICTED: uncharacterized protein LOC100828693 [Brachypodium
           distachyon]
          Length = 74

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 42/68 (61%), Positives = 45/68 (66%)
 Frame = +1

Query: 52  CVQCGTNSNPCRCKVVGPTLGLXXXXXXXXXXXXXXXXXYIFKHVKGRRIMGHPVRVVYP 231
           CVQCGT SNPCRCKVVGPTLG                  Y+F+H KGRRIMGHP RVVYP
Sbjct: 7   CVQCGTRSNPCRCKVVGPTLGFVAFLVTGVVEWPLGAAVYLFRHRKGRRIMGHPARVVYP 66

Query: 232 KVNRCIPI 255
           +V R IPI
Sbjct: 67  RVTRAIPI 74


>ref|XP_002873830.1| hypothetical protein ARALYDRAFT_909742 [Arabidopsis lyrata subsp.
           lyrata] gi|297319667|gb|EFH50089.1| hypothetical protein
           ARALYDRAFT_909742 [Arabidopsis lyrata subsp. lyrata]
          Length = 73

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 43/72 (59%), Positives = 45/72 (62%)
 Frame = +1

Query: 40  VIMLCVQCGTNSNPCRCKVVGPTLGLXXXXXXXXXXXXXXXXXYIFKHVKGRRIMGHPVR 219
           V   C+QCGT  NPCRCKVVGPTLG                  YIFKH KGRRIMGHP R
Sbjct: 2   VFPACIQCGTRQNPCRCKVVGPTLGFVAFLITGIIEWPVGAVVYIFKHAKGRRIMGHPAR 61

Query: 220 VVYPKVNRCIPI 255
            VYPKV+R IPI
Sbjct: 62  RVYPKVSRSIPI 73


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