BLASTX nr result

ID: Bupleurum21_contig00018733 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00018733
         (1059 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28415.3| unnamed protein product [Vitis vinifera]              221   2e-55
ref|XP_002272218.1| PREDICTED: vacuolar protein sorting-associat...   221   2e-55
ref|XP_002321189.1| predicted protein [Populus trichocarpa] gi|2...   220   5e-55
ref|XP_002534605.1| expressed protein, putative [Ricinus communi...   219   9e-55
ref|XP_003589193.1| Vacuolar protein sorting-associated protein-...   211   2e-52

>emb|CBI28415.3| unnamed protein product [Vitis vinifera]
          Length = 913

 Score =  221 bits (563), Expect = 2e-55
 Identities = 104/124 (83%), Positives = 113/124 (91%)
 Frame = -1

Query: 1059 MRKEIHDLRNNARIFQLSKCTACTFTLDLPAIHFMCMHSFHQRCLGDNEKECPECAPEYG 880
            MRKEI DLR NARIFQLSKCTACTFTLDLPA+HFMCMHSFHQRCLGDNEKECPECAPEY 
Sbjct: 790  MRKEIQDLRTNARIFQLSKCTACTFTLDLPAVHFMCMHSFHQRCLGDNEKECPECAPEYR 849

Query: 879  SVIKMKKSLEQNSKNQDQFFQQVKSSKDGFSVIAEYFGKGIISKTTTGSADTLSLGNTTS 700
            SV++MK++LEQNSK+QDQFFQQVKSSKDGFSVIAEYFGKGIISKT+ G   +L  G+T S
Sbjct: 850  SVLEMKRNLEQNSKDQDQFFQQVKSSKDGFSVIAEYFGKGIISKTSNGPTGSLRSGSTAS 909

Query: 699  GSGF 688
             SGF
Sbjct: 910  SSGF 913


>ref|XP_002272218.1| PREDICTED: vacuolar protein sorting-associated protein 11 homolog
            [Vitis vinifera]
          Length = 960

 Score =  221 bits (563), Expect = 2e-55
 Identities = 104/124 (83%), Positives = 113/124 (91%)
 Frame = -1

Query: 1059 MRKEIHDLRNNARIFQLSKCTACTFTLDLPAIHFMCMHSFHQRCLGDNEKECPECAPEYG 880
            MRKEI DLR NARIFQLSKCTACTFTLDLPA+HFMCMHSFHQRCLGDNEKECPECAPEY 
Sbjct: 837  MRKEIQDLRTNARIFQLSKCTACTFTLDLPAVHFMCMHSFHQRCLGDNEKECPECAPEYR 896

Query: 879  SVIKMKKSLEQNSKNQDQFFQQVKSSKDGFSVIAEYFGKGIISKTTTGSADTLSLGNTTS 700
            SV++MK++LEQNSK+QDQFFQQVKSSKDGFSVIAEYFGKGIISKT+ G   +L  G+T S
Sbjct: 897  SVLEMKRNLEQNSKDQDQFFQQVKSSKDGFSVIAEYFGKGIISKTSNGPTGSLRSGSTAS 956

Query: 699  GSGF 688
             SGF
Sbjct: 957  SSGF 960


>ref|XP_002321189.1| predicted protein [Populus trichocarpa] gi|222861962|gb|EEE99504.1|
            predicted protein [Populus trichocarpa]
          Length = 962

 Score =  220 bits (560), Expect = 5e-55
 Identities = 104/124 (83%), Positives = 113/124 (91%)
 Frame = -1

Query: 1059 MRKEIHDLRNNARIFQLSKCTACTFTLDLPAIHFMCMHSFHQRCLGDNEKECPECAPEYG 880
            MRKEI DLR NARIFQLSKCTACTFTLDLPA+HFMCMHSFHQRCLGDNEKECPECAPEY 
Sbjct: 839  MRKEIQDLRTNARIFQLSKCTACTFTLDLPAVHFMCMHSFHQRCLGDNEKECPECAPEYR 898

Query: 879  SVIKMKKSLEQNSKNQDQFFQQVKSSKDGFSVIAEYFGKGIISKTTTGSADTLSLGNTTS 700
            SV++ K+SLEQNSK+QD+FFQQVKSSKDGFSVIAEYFGKGIISKT+ GS  T   G+T+S
Sbjct: 899  SVLETKRSLEQNSKDQDRFFQQVKSSKDGFSVIAEYFGKGIISKTSNGSTSTGRTGDTSS 958

Query: 699  GSGF 688
             SGF
Sbjct: 959  SSGF 962


>ref|XP_002534605.1| expressed protein, putative [Ricinus communis]
            gi|223524934|gb|EEF27778.1| expressed protein, putative
            [Ricinus communis]
          Length = 962

 Score =  219 bits (558), Expect = 9e-55
 Identities = 102/124 (82%), Positives = 114/124 (91%)
 Frame = -1

Query: 1059 MRKEIHDLRNNARIFQLSKCTACTFTLDLPAIHFMCMHSFHQRCLGDNEKECPECAPEYG 880
            MRKEIH+LR NARIFQLSKCTACTFTLDLPA+HFMCMHSFHQRCLGDNEKECPECAPEY 
Sbjct: 839  MRKEIHELRTNARIFQLSKCTACTFTLDLPAVHFMCMHSFHQRCLGDNEKECPECAPEYR 898

Query: 879  SVIKMKKSLEQNSKNQDQFFQQVKSSKDGFSVIAEYFGKGIISKTTTGSADTLSLGNTTS 700
            +V++MK+SLEQNSK+QDQFFQ VK SKDGFSVIAEYFGKGIISKT+ G++  L  G+T+S
Sbjct: 899  AVMEMKRSLEQNSKDQDQFFQLVKGSKDGFSVIAEYFGKGIISKTSNGTSGALRSGSTSS 958

Query: 699  GSGF 688
             SGF
Sbjct: 959  SSGF 962


>ref|XP_003589193.1| Vacuolar protein sorting-associated protein-like protein [Medicago
            truncatula] gi|355478241|gb|AES59444.1| Vacuolar protein
            sorting-associated protein-like protein [Medicago
            truncatula]
          Length = 968

 Score =  211 bits (538), Expect = 2e-52
 Identities = 99/124 (79%), Positives = 110/124 (88%)
 Frame = -1

Query: 1059 MRKEIHDLRNNARIFQLSKCTACTFTLDLPAIHFMCMHSFHQRCLGDNEKECPECAPEYG 880
            MRKE+ DLR NARIFQLSKCTACTFTLDLPA+HFMCMHSFH  CLGDNEKECP CAPEY 
Sbjct: 845  MRKEVQDLRTNARIFQLSKCTACTFTLDLPAVHFMCMHSFHLWCLGDNEKECPACAPEYR 904

Query: 879  SVIKMKKSLEQNSKNQDQFFQQVKSSKDGFSVIAEYFGKGIISKTTTGSADTLSLGNTTS 700
            SV++MK++LEQNSK+QD+FFQQVK+SKDGFSVIAEYFGKGIISKT+ GS   L  GN +S
Sbjct: 905  SVLEMKRNLEQNSKSQDRFFQQVKNSKDGFSVIAEYFGKGIISKTSNGSTPGLGSGNASS 964

Query: 699  GSGF 688
             SGF
Sbjct: 965  SSGF 968


Top