BLASTX nr result

ID: Bupleurum21_contig00018726 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00018726
         (875 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAD97868.1| ELF3 homologue [Lemna paucicostata]                   180   4e-43
dbj|BAD97872.1| ELF3 homologue [Lemna gibba]                          175   1e-41
emb|CBI20609.3| unnamed protein product [Vitis vinifera]              162   9e-38
ref|XP_002278577.1| PREDICTED: protein EARLY FLOWERING 3-like [V...   161   2e-37
ref|XP_003523640.1| PREDICTED: protein EARLY FLOWERING 3-like [G...   152   1e-34

>dbj|BAD97868.1| ELF3 homologue [Lemna paucicostata]
          Length = 492

 Score =  180 bits (456), Expect = 4e-43
 Identities = 127/323 (39%), Positives = 172/323 (53%), Gaps = 54/323 (16%)
 Frame = +1

Query: 1   DEEKSMEPMFPRLHVNDTERGGPRAPPRNKMALYEQLSIPSQKFNSEMSMA-----NQGS 165
           +EEK   P+FPRLHVND ++GGPRAPPRNKMALYEQ SIPSQ+F S  S +     ++GS
Sbjct: 6   EEEKISSPLFPRLHVNDADKGGPRAPPRNKMALYEQFSIPSQRFTSSSSPSMPFPSHRGS 65

Query: 166 NNKLNPPLSSQ--------ASPSV-------HRVKEPTRIAALNPSL------VRTGPEN 282
           N+   P +SS         AS S+       H +      A+   S+      VR  P  
Sbjct: 66  NSV--PSISSSQGCVQERSASSSLYMRSQIPHSLTTEKSQASTTESMPRVTSTVRQSPAE 123

Query: 283 RQDEDFTVPSFVQNN----HFRDIGSRD--SSVRVGN------IPQDGQRSPCVCSNVVE 426
           + DEDF VP +VQ++    H  D  +R    S R+          QD         + + 
Sbjct: 124 KSDEDFRVPVYVQSSNRDGHVADCKTRSFKKSDRIHEDLSSTVTLQDASSGQDHDDDNLR 183

Query: 427 SRDDARRSLQTETQDR-------------GDEESEKSMVDSMSGTDL-SPDDVVGIIGQK 564
           S  DA +S  + + ++              D+ SE+ +VDS    D  +PD++VG+IG K
Sbjct: 184 SSGDAEKSGSSGSTEKIDSSGDDAADRMVRDDASERLLVDSREAADAYNPDNLVGLIGLK 243

Query: 565 HFWKARRAIVNQQRVFAVQVFELHRLIKVQKLIAESPHFLLEE--SFVGRPLKGSPQKKD 738
           HFWKARRAI++QQRV A+QVFELHRL+ +QKL+AESP  LLE+  SF G P   +P K  
Sbjct: 244 HFWKARRAIISQQRVLALQVFELHRLMNIQKLLAESPQLLLEDASSFHGSP--AAPSKSQ 301

Query: 739 ASDAVVKSTRKIVNCIDVLEKPD 807
             D  VK     VN     ++ +
Sbjct: 302 PVDTSVKPIDPTVNATQPADRKE 324


>dbj|BAD97872.1| ELF3 homologue [Lemna gibba]
          Length = 470

 Score =  175 bits (444), Expect = 1e-41
 Identities = 113/289 (39%), Positives = 157/289 (54%), Gaps = 36/289 (12%)
 Frame = +1

Query: 1   DEEKSMEPMFPRLHVNDTERGGPRAPPRNKMALYEQLSIPSQKFNSEMSM-----ANQGS 165
           DE+K   P+FPRLHVND ++GGPRAPPRNKMALYEQ SIPSQ+F+S  S      + +GS
Sbjct: 6   DEDKVFGPLFPRLHVNDADQGGPRAPPRNKMALYEQFSIPSQRFSSSSSSTLTFSSRRGS 65

Query: 166 NNKLNPPLSSQASPSVHRVKEPTRIAA--LNPSLVRTGP---------ENRQDEDFTVPS 312
           ++   P +SS       R    +      + PSL R  P         E  ++EDF VP 
Sbjct: 66  SSA--PSISSHQGCGQERSSSTSFYMRPQIPPSLSRERPDATARKPSMEKSEEEDFRVPI 123

Query: 313 FVQNNHFRDIGSRDSSV---------RVGNIPQDGQRSPCVCSNVVESRDDARRSLQTET 465
           +VQ++    + +   +          + G  P D      V ++    +D    +L++  
Sbjct: 124 YVQSSIKDCLAAERKTTPGSDSRNFKKNGRDPGDPSEDVVVGTDTSSDQDHDDGNLRSSG 183

Query: 466 QDRGDEE---SEKSMVDSMSGTDL--------SPDDVVGIIGQKHFWKARRAIVNQQRVF 612
                ++   +E    D   G D         +PD++VG+IG KHFWKARRA+VNQQRVF
Sbjct: 184 SSGSTDKIPSAEDGATDCSIGDDAFGEGMDACNPDNLVGLIGLKHFWKARRAMVNQQRVF 243

Query: 613 AVQVFELHRLIKVQKLIAESPHFLLEESFVGRPLKGSPQKKDASDAVVK 759
           A+QVFELHRL+ VQKL+AESPH LLE++        +P K    D++VK
Sbjct: 244 ALQVFELHRLMNVQKLLAESPHLLLEDASSFHGSSNAPVKSQPVDSLVK 292


>emb|CBI20609.3| unnamed protein product [Vitis vinifera]
          Length = 671

 Score =  162 bits (410), Expect = 9e-38
 Identities = 99/179 (55%), Positives = 117/179 (65%), Gaps = 3/179 (1%)
 Frame = +1

Query: 328 HFRDIGSRDSSVRVGNIPQDGQRSPCVCSNVVESRDDAR-RSLQTETQDRGDEESEKSMV 504
           H  D     S VR  +   DG  SP    N    R D    +LQ    D  D+ SE SMV
Sbjct: 220 HDTDDAWNASRVRSSSYSGDGLGSPSEPDNDGACRGDKTCGTLQKGNVDTNDDLSETSMV 279

Query: 505 DSMSGTDLSPDDVVGIIGQKHFWKARRAIVNQQRVFAVQVFELHRLIKVQKLIAESPHFL 684
           DSMSG D++PDDVVGIIGQKHFWKARRAIVNQQRVFAVQVFELHRLIKVQ+LIA SPH +
Sbjct: 280 DSMSGLDITPDDVVGIIGQKHFWKARRAIVNQQRVFAVQVFELHRLIKVQRLIAGSPHLM 339

Query: 685 LEES-FVGRP-LKGSPQKKDASDAVVKSTRKIVNCIDVLEKPDTRVESSAENAVEKTSM 855
           ++ES ++G+P LK SP KK   + VVK    +V   D  E+   ++E SAENAV KT +
Sbjct: 340 VDESAYLGKPSLKSSPAKKLPLEYVVKPPPNMVMHKDDYERASHQLECSAENAVGKTHL 398



 Score = 97.4 bits (241), Expect = 4e-18
 Identities = 63/146 (43%), Positives = 79/146 (54%), Gaps = 25/146 (17%)
 Frame = +1

Query: 1   DEEKSMEPMFPRLHVNDTERGGPRAPPRNKMALYEQLSIPSQKFN-SEMSMANQGSNNKL 177
           DEEK M PMFPRLHVNDTE+GGPRAPPRNKMALYEQLS+PSQ+ N   M + +  ++N +
Sbjct: 6   DEEKIMGPMFPRLHVNDTEKGGPRAPPRNKMALYEQLSVPSQRCNPGVMPLKSNNASNLV 65

Query: 178 NPPLSSQASPSVHRVKEPTRIA-------------------ALNPSLVRTGPENRQ--DE 294
            P  SSQ S     V  P  I+                    LN  L +     +Q  ++
Sbjct: 66  PPASSSQGSGHERGVFFPHHISPSTPTHLPEKLHARHSDAVILNTPLAQFEQRKKQGDED 125

Query: 295 DFTVPSFVQNN---HFRDIGSRDSSV 363
           DF VP FV +    H R+  S D  +
Sbjct: 126 DFRVPIFVHSGTEFHGRNQNSIDREI 151


>ref|XP_002278577.1| PREDICTED: protein EARLY FLOWERING 3-like [Vitis vinifera]
          Length = 725

 Score =  161 bits (408), Expect = 2e-37
 Identities = 97/170 (57%), Positives = 115/170 (67%), Gaps = 3/170 (1%)
 Frame = +1

Query: 355 SSVRVGNIPQDGQRSPCVCSNVVESRDDAR-RSLQTETQDRGDEESEKSMVDSMSGTDLS 531
           S VR  +   DG  SP    N    R D    +LQ    D  D+ SE SMVDSMSG D++
Sbjct: 283 SRVRSSSYSGDGLGSPSEPDNDGACRGDKTCGTLQKGNVDTNDDLSETSMVDSMSGLDIT 342

Query: 532 PDDVVGIIGQKHFWKARRAIVNQQRVFAVQVFELHRLIKVQKLIAESPHFLLEES-FVGR 708
           PDDVVGIIGQKHFWKARRAIVNQQRVFAVQVFELHRLIKVQ+LIA SPH +++ES ++G+
Sbjct: 343 PDDVVGIIGQKHFWKARRAIVNQQRVFAVQVFELHRLIKVQRLIAGSPHLMVDESAYLGK 402

Query: 709 P-LKGSPQKKDASDAVVKSTRKIVNCIDVLEKPDTRVESSAENAVEKTSM 855
           P LK SP KK   + VVK    +V   D  E+   ++E SAENAV KT +
Sbjct: 403 PSLKSSPAKKLPLEYVVKPPPNMVMHKDDYERASHQLECSAENAVGKTHL 452



 Score = 97.8 bits (242), Expect = 3e-18
 Identities = 78/204 (38%), Positives = 100/204 (49%), Gaps = 38/204 (18%)
 Frame = +1

Query: 1   DEEKSMEPMFPRLHVNDTERGGPRAPPRNKMALYEQLSIPSQKFN-SEMSMANQGSNNKL 177
           DEEK M PMFPRLHVNDTE+GGPRAPPRNKMALYEQLS+PSQ+ N   M + +  ++N +
Sbjct: 6   DEEKIMGPMFPRLHVNDTEKGGPRAPPRNKMALYEQLSVPSQRCNPGVMPLKSNNASNLV 65

Query: 178 NPPLSSQASPSVHRVKEPTRIA-------------------ALNPSLVRTGPENRQ--DE 294
            P  SSQ S     V  P  I+                    LN  L +     +Q  ++
Sbjct: 66  PPASSSQGSGHERGVFFPHHISPSTPTHLPEKLHARHSDAVILNTPLAQFEQRKKQGDED 125

Query: 295 DFTVPSFV----------QNNHFRDIGSRDSSVRVG---NIPQDGQRS-PCVCSNVVESR 432
           DF VP FV          QN+  R+I +  SS  +G   N+    ++      SN +  R
Sbjct: 126 DFRVPIFVHSGTEFHGRNQNSIDREILTPSSSTCLGHSINLQNACEKELKQTSSNGLSVR 185

Query: 433 DDARRSLQTETQD--RGDEESEKS 498
            D R       +D     E SEKS
Sbjct: 186 QDKRSQGDVNRKDYVSSREYSEKS 209


>ref|XP_003523640.1| PREDICTED: protein EARLY FLOWERING 3-like [Glycine max]
          Length = 714

 Score =  152 bits (384), Expect = 1e-34
 Identities = 97/186 (52%), Positives = 119/186 (63%), Gaps = 6/186 (3%)
 Frame = +1

Query: 319 QNNHFRDIGSRDSSVRV---GNIPQDGQRSPCVCSNVVESRDDARRS-LQTETQDRGDEE 486
           ++N   D G    S R    GN P   Q SP    N  E  D    S +Q    +  D  
Sbjct: 257 RSNDIGDNGCLVESARETDKGNAPTANQTSPADAINDTEHHDTRMGSPIQRGNLNESDNA 316

Query: 487 SEKSMVDSMSGTDLSPDDVVGIIGQKHFWKARRAIVNQQRVFAVQVFELHRLIKVQKLIA 666
           S+ SMV+++S   +SPDDVVGIIGQKHFWKARRAI NQQRVFAVQVFELHRLIKVQ+LIA
Sbjct: 317 SKISMVENLSTVRISPDDVVGIIGQKHFWKARRAIANQQRVFAVQVFELHRLIKVQQLIA 376

Query: 667 ESPHFLLEE-SFVGR-PLKGSPQKKDASDAVVKSTRKIVNCIDVLEKPDTRVESSAENAV 840
            SP  LLE+ +F+G+ P KGS  KK A + VVK  ++ +   D  EK + ++E SAENAV
Sbjct: 377 GSPDILLEDGAFLGKSPPKGSTPKKLALEYVVKPRQQNLKRKDDSEKLNHKMECSAENAV 436

Query: 841 EKTSMS 858
            KTS+S
Sbjct: 437 GKTSLS 442



 Score = 95.1 bits (235), Expect = 2e-17
 Identities = 45/65 (69%), Positives = 51/65 (78%)
 Frame = +1

Query: 1   DEEKSMEPMFPRLHVNDTERGGPRAPPRNKMALYEQLSIPSQKFNSEMSMANQGSNNKLN 180
           D+EK M PMFPRLHVNDTE+GGPRAPPRNKMALYEQ SIPSQ+FNS +   N   ++   
Sbjct: 6   DDEKVMGPMFPRLHVNDTEKGGPRAPPRNKMALYEQFSIPSQRFNSGVLPLNPNISSNTV 65

Query: 181 PPLSS 195
           PP SS
Sbjct: 66  PPASS 70


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