BLASTX nr result

ID: Bupleurum21_contig00018715 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00018715
         (1095 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002297703.1| predicted protein [Populus trichocarpa] gi|2...    69   2e-09
ref|XP_002535493.1| conserved hypothetical protein [Ricinus comm...    64   5e-08
ref|XP_002538835.1| conserved hypothetical protein [Ricinus comm...    64   5e-08
ref|XP_002275846.1| PREDICTED: transcription factor GAMYB [Vitis...    63   1e-07
ref|XP_002298147.1| predicted protein [Populus trichocarpa] gi|2...    62   3e-07

>ref|XP_002297703.1| predicted protein [Populus trichocarpa] gi|222844961|gb|EEE82508.1|
            predicted protein [Populus trichocarpa]
          Length = 402

 Score = 68.9 bits (167), Expect = 2e-09
 Identities = 35/59 (59%), Positives = 42/59 (71%)
 Frame = +1

Query: 919  MSDMASEREDTMVCSGYADSSLVEEVSEENMATGGLLKKGPWTSAEDAILIDYVNEHGE 1095
            MS M SE ED +V +   +S L EE +    A GG+LKKGPWTSAEDAILI+YV +HGE
Sbjct: 1    MSRMTSESEDGIVSNNQIESPLGEEGNYCGSANGGVLKKGPWTSAEDAILIEYVKKHGE 59


>ref|XP_002535493.1| conserved hypothetical protein [Ricinus communis]
           gi|223522917|gb|EEF26889.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 339

 Score = 64.3 bits (155), Expect = 5e-08
 Identities = 31/35 (88%), Positives = 33/35 (94%)
 Frame = -1

Query: 618 AKKQRKARDQQRLFQFLMHLRLEFESIRGQLARRS 514
           AKKQ+KARDQQRLFQFLMHLRLEFESIRGQL  +S
Sbjct: 13  AKKQQKARDQQRLFQFLMHLRLEFESIRGQLLHKS 47


>ref|XP_002538835.1| conserved hypothetical protein [Ricinus communis]
           gi|223510211|gb|EEF23548.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 92

 Score = 64.3 bits (155), Expect = 5e-08
 Identities = 31/35 (88%), Positives = 33/35 (94%)
 Frame = -1

Query: 618 AKKQRKARDQQRLFQFLMHLRLEFESIRGQLARRS 514
           AKKQ+KARDQQRLFQFLMHLRLEFESIRGQL  +S
Sbjct: 13  AKKQQKARDQQRLFQFLMHLRLEFESIRGQLLHKS 47


>ref|XP_002275846.1| PREDICTED: transcription factor GAMYB [Vitis vinifera]
            gi|298205121|emb|CBI40642.3| unnamed protein product
            [Vitis vinifera]
          Length = 559

 Score = 62.8 bits (151), Expect = 1e-07
 Identities = 30/60 (50%), Positives = 41/60 (68%), Gaps = 1/60 (1%)
 Frame = +1

Query: 919  MSDMASEREDTMVCSGYADSSLVEEVSEENMATGGL-LKKGPWTSAEDAILIDYVNEHGE 1095
            MS + +E ED M+      S L++E +    A GG+ LKKGPWTS+EDAIL++YV +HGE
Sbjct: 1    MSHLTNESEDGMLSKDQTGSPLIDEGNSSGSAGGGIVLKKGPWTSSEDAILVEYVKKHGE 60


>ref|XP_002298147.1| predicted protein [Populus trichocarpa] gi|222845405|gb|EEE82952.1|
            predicted protein [Populus trichocarpa]
          Length = 553

 Score = 62.0 bits (149), Expect = 3e-07
 Identities = 34/61 (55%), Positives = 40/61 (65%), Gaps = 2/61 (3%)
 Frame = +1

Query: 919  MSDMASEREDTMVCSGYADSSLVEEVSEENMATGGL--LKKGPWTSAEDAILIDYVNEHG 1092
            MS M +  ED     G  DS   +EV++  M  GG+  LKKGPWTSAEDAILIDYV +HG
Sbjct: 1    MSSMMNGTEDNKRSKGRQDSPAADEVNDGGMV-GGITPLKKGPWTSAEDAILIDYVKKHG 59

Query: 1093 E 1095
            E
Sbjct: 60   E 60


Top