BLASTX nr result

ID: Bupleurum21_contig00018689 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00018689
         (667 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEI70506.1| auxin-responsive protein [Gossypium hirsutum]           77   2e-12
ref|XP_003632858.1| PREDICTED: auxin-responsive protein IAA27-li...    69   8e-10
ref|XP_002284282.1| PREDICTED: auxin-responsive protein IAA27-li...    69   8e-10
emb|CBI36106.3| unnamed protein product [Vitis vinifera]               67   4e-09
gb|AEX00366.1| IAA27 [Solanum lycopersicum]                            61   2e-07

>gb|AEI70506.1| auxin-responsive protein [Gossypium hirsutum]
          Length = 332

 Score = 77.4 bits (189), Expect = 2e-12
 Identities = 57/119 (47%), Positives = 68/119 (57%), Gaps = 14/119 (11%)
 Frame = -2

Query: 318 MSTPQEHDYIGLSETRVMDASSDNKLSSST-------DDERSNN-LLNLKETE-----XX 178
           MSTP EHDYIGL+ T  M+ SS+   SSS+       +D+ +NN  LNLKETE       
Sbjct: 1   MSTPLEHDYIGLAATSSMERSSEKISSSSSSSIPSNIEDKTTNNPSLNLKETELRLGLPG 60

Query: 177 XXXXXXXXXXXGKDLEESEKSVGGFCASPFKNFASSSSGAKRVFSDAIDGSN-KWGFSV 4
                      GKDLE ++KS  GF  SP KN     SGAKR FSDAIDGSN  W F++
Sbjct: 61  SESPERKLSLFGKDLETNDKS-NGFVGSPLKNLV---SGAKRGFSDAIDGSNGNWVFAI 115


>ref|XP_003632858.1| PREDICTED: auxin-responsive protein IAA27-like isoform 2 [Vitis
           vinifera]
          Length = 334

 Score = 68.9 bits (167), Expect = 8e-10
 Identities = 48/115 (41%), Positives = 57/115 (49%), Gaps = 10/115 (8%)
 Frame = -2

Query: 318 MSTPQEHDYIGLSETRVMDASSD--NKLSSST--DDERSNNLLNLKETEXXXXXXXXXXX 151
           MS P EHDYIGLSE   M+ +SD  +  SSST   +   +  LNL+ETE           
Sbjct: 1   MSIPLEHDYIGLSEAPSMERASDKISSASSSTISSESEKSTALNLRETELRLGLPGSESP 60

Query: 150 XXGKDL------EESEKSVGGFCASPFKNFASSSSGAKRVFSDAIDGSNKWGFSV 4
                L      ++ E    G+     K F S   GAKR FSDAIDGS KW FSV
Sbjct: 61  ERKPQLGVSLFGKDLEDKTNGYSLGSLKGFVS---GAKRGFSDAIDGSGKWVFSV 112


>ref|XP_002284282.1| PREDICTED: auxin-responsive protein IAA27-like isoform 1 [Vitis
           vinifera]
          Length = 343

 Score = 68.9 bits (167), Expect = 8e-10
 Identities = 48/115 (41%), Positives = 57/115 (49%), Gaps = 10/115 (8%)
 Frame = -2

Query: 318 MSTPQEHDYIGLSETRVMDASSD--NKLSSST--DDERSNNLLNLKETEXXXXXXXXXXX 151
           MS P EHDYIGLSE   M+ +SD  +  SSST   +   +  LNL+ETE           
Sbjct: 1   MSIPLEHDYIGLSEAPSMERASDKISSASSSTISSESEKSTALNLRETELRLGLPGSESP 60

Query: 150 XXGKDL------EESEKSVGGFCASPFKNFASSSSGAKRVFSDAIDGSNKWGFSV 4
                L      ++ E    G+     K F S   GAKR FSDAIDGS KW FSV
Sbjct: 61  ERKPQLGVSLFGKDLEDKTNGYSLGSLKGFVS---GAKRGFSDAIDGSGKWVFSV 112


>emb|CBI36106.3| unnamed protein product [Vitis vinifera]
          Length = 292

 Score = 66.6 bits (161), Expect = 4e-09
 Identities = 47/109 (43%), Positives = 56/109 (51%), Gaps = 4/109 (3%)
 Frame = -2

Query: 318 MSTPQEHDYIGLSETRVMDASSD--NKLSSST--DDERSNNLLNLKETEXXXXXXXXXXX 151
           MS P EHDYIGLSE   M+ +SD  +  SSST   +   +  LNL+ETE           
Sbjct: 1   MSIPLEHDYIGLSEAPSMERASDKISSASSSTISSESEKSTALNLRETELRLGLPG---- 56

Query: 150 XXGKDLEESEKSVGGFCASPFKNFASSSSGAKRVFSDAIDGSNKWGFSV 4
               +  E +  +GGF            SGAKR FSDAIDGS KW FSV
Sbjct: 57  ---SESPERKPQLGGFV-----------SGAKRGFSDAIDGSGKWVFSV 91


>gb|AEX00366.1| IAA27 [Solanum lycopersicum]
          Length = 278

 Score = 61.2 bits (147), Expect = 2e-07
 Identities = 46/105 (43%), Positives = 56/105 (53%)
 Frame = -2

Query: 318 MSTPQEHDYIGLSETRVMDASSDNKLSSSTDDERSNNLLNLKETEXXXXXXXXXXXXXGK 139
           MS P EHDYIGLSE  +M+ SSD K+SSS+    S+++LNLKETE               
Sbjct: 1   MSVPLEHDYIGLSEPSLMERSSD-KISSSS----SSSVLNLKETELRLGLPGS------- 48

Query: 138 DLEESEKSVGGFCASPFKNFASSSSGAKRVFSDAIDGSNKWGFSV 4
             E    S+ G    P  NF S +   KR FSDAID S K   S+
Sbjct: 49  --ESHGVSLFGKDLDPLSNFTSRT---KRGFSDAIDASGKSDLSI 88


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