BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00018685
         (386 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001078750.1| polypyrimidine tract-binding protein 2 [Arab...   198   4e-49
ref|XP_004145983.1| PREDICTED: polypyrimidine tract-binding prot...   187   6e-46
ref|XP_002317750.1| predicted protein [Populus trichocarpa] gi|2...   186   1e-45
gb|ABK95840.1| unknown [Populus trichocarpa]                          186   1e-45
ref|XP_002513582.1| polypyrimidine tract binding protein, putati...   184   5e-45

>ref|NP_001078750.1| polypyrimidine tract-binding protein 2 [Arabidopsis thaliana]
           gi|110737620|dbj|BAF00751.1| polypyrimidine
           tract-binding RNA transport protein-like [Arabidopsis
           thaliana] gi|332008936|gb|AED96319.1| polypyrimidine
           tract-binding protein 2 [Arabidopsis thaliana]
          Length = 329

 Score =  198 bits (503), Expect = 4e-49
 Identities = 98/123 (79%), Positives = 112/123 (91%), Gaps = 1/123 (0%)
 Frame = +1

Query: 19  YLRWQLIALRERAHVFSAFGFVHKITTFEKTAGFQALVQFTDSETASSAKDALDGRSIPS 198
           YL+WQ  AL ERAHVFSAFGFVHKITTFEKTAG+QALVQFTD+ETA++AK ALDGRSIP 
Sbjct: 19  YLQWQPNALGERAHVFSAFGFVHKITTFEKTAGYQALVQFTDAETATAAKLALDGRSIPR 78

Query: 199 YLIPE-LTPCSLRITYSAHTDLTVKFQSHRSRDYTNPSLPVNPSAIDATGQISMGLDGKK 375
           YL+ E +  CSL+ITYSAHTDLTVKFQSHRSRDYTNP LPV PSAID+TGQ+++G+DGKK
Sbjct: 79  YLLAETVGQCSLKITYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDSTGQVAVGVDGKK 138

Query: 376 LEP 384
           +EP
Sbjct: 139 MEP 141



 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 44/86 (51%), Positives = 58/86 (67%)
 Frame = +1

Query: 61  VFSAFGFVHKITTFEKTAGFQALVQFTDSETASSAKDALDGRSIPSYLIPELTPCSLRIT 240
           VF+AFG V KI  F+K  G QAL+Q++D +TA  AK+AL+G     + I +   C L IT
Sbjct: 165 VFAAFGEVQKIAMFDKNGGVQALIQYSDVQTAVVAKEALEG-----HCIYDGGFCKLHIT 219

Query: 241 YSAHTDLTVKFQSHRSRDYTNPSLPV 318
           YS HTDL++K  + RSRDYT P+ PV
Sbjct: 220 YSRHTDLSIKVNNDRSRDYTMPNPPV 245


>ref|XP_004145983.1| PREDICTED: polypyrimidine tract-binding protein homolog 1-like
           [Cucumis sativus]
          Length = 776

 Score =  187 bits (476), Expect = 6e-46
 Identities = 93/109 (85%), Positives = 102/109 (93%), Gaps = 1/109 (0%)
 Frame = +1

Query: 61  VFSAFGFVHKITTFEKTAGFQALVQFTDSETASSAKDALDGRSIPSYLIPE-LTPCSLRI 237
           VFSAFGFVHKITTFEKTAGFQALVQF+D+ETASSAK+ALDGRSIP YL+P+ + PCSLRI
Sbjct: 456 VFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNALDGRSIPRYLLPDHVGPCSLRI 515

Query: 238 TYSAHTDLTVKFQSHRSRDYTNPSLPVNPSAIDATGQISMGLDGKKLEP 384
           TYSAHTDLTVKFQSHRSRDYTNP LPV PSAID +GQ ++GLDGKKLEP
Sbjct: 516 TYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDGSGQFTVGLDGKKLEP 564



 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 43/85 (50%), Positives = 56/85 (65%)
 Frame = +1

Query: 61  VFSAFGFVHKITTFEKTAGFQALVQFTDSETASSAKDALDGRSIPSYLIPELTPCSLRIT 240
           VFSAFG V KI  F+K  G QAL+Q+ D +TA  AK+AL+G     + I +   C L I+
Sbjct: 588 VFSAFGPVQKIAMFDKNGGVQALIQYPDVQTAVVAKEALEG-----HCIYDGGFCKLHIS 642

Query: 241 YSAHTDLTVKFQSHRSRDYTNPSLP 315
           YS HTDL++K  + RSRDYT P+ P
Sbjct: 643 YSRHTDLSIKVNNDRSRDYTIPNNP 667


>ref|XP_002317750.1| predicted protein [Populus trichocarpa] gi|222858423|gb|EEE95970.1|
           predicted protein [Populus trichocarpa]
          Length = 350

 Score =  186 bits (473), Expect = 1e-45
 Identities = 93/109 (85%), Positives = 102/109 (93%), Gaps = 1/109 (0%)
 Frame = +1

Query: 61  VFSAFGFVHKITTFEKTAGFQALVQFTDSETASSAKDALDGRSIPSYLIPE-LTPCSLRI 237
           VFSAFGFVHKITTFEKTAGFQALVQF+D+ETASSAK+ALDGR+IPSYL+PE L PC+LRI
Sbjct: 124 VFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNALDGRNIPSYLLPEHLGPCTLRI 183

Query: 238 TYSAHTDLTVKFQSHRSRDYTNPSLPVNPSAIDATGQISMGLDGKKLEP 384
           TYSAHTDL+VKFQSHRSRDYTN +LPV PSAIDA G  S+GLDGKKLEP
Sbjct: 184 TYSAHTDLSVKFQSHRSRDYTNANLPVAPSAIDANGMFSVGLDGKKLEP 232



 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 41/89 (46%), Positives = 59/89 (66%), Gaps = 1/89 (1%)
 Frame = +1

Query: 61  VFSAFGFVHKITTFEKTAGFQALVQFTDSETASSAKDALDGRSIPSYLIPELTPCSLRIT 240
           VFS+FG V KI  F+K  G QAL+Q+ D +TA  AK+AL+G     + I +   C L ++
Sbjct: 256 VFSSFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEG-----HCIYDGGFCKLHLS 310

Query: 241 YSAHTDLTVKFQSHRSRDYTNP-SLPVNP 324
           YS H+DL++K  + RSRDYT P ++ +NP
Sbjct: 311 YSRHSDLSIKVNNDRSRDYTIPNTVMMNP 339


>gb|ABK95840.1| unknown [Populus trichocarpa]
          Length = 442

 Score =  186 bits (473), Expect = 1e-45
 Identities = 93/109 (85%), Positives = 102/109 (93%), Gaps = 1/109 (0%)
 Frame = +1

Query: 61  VFSAFGFVHKITTFEKTAGFQALVQFTDSETASSAKDALDGRSIPSYLIPE-LTPCSLRI 237
           VFSAFGFVHKITTFEKTAGFQALVQF+D+ETASSAK+ALDGR+IPSYL+PE L PC+LRI
Sbjct: 133 VFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNALDGRNIPSYLLPEHLGPCTLRI 192

Query: 238 TYSAHTDLTVKFQSHRSRDYTNPSLPVNPSAIDATGQISMGLDGKKLEP 384
           TYSAHTDL+VKFQSHRSRDYTN +LPV PSAIDA G  S+GLDGKKLEP
Sbjct: 193 TYSAHTDLSVKFQSHRSRDYTNANLPVAPSAIDANGMFSVGLDGKKLEP 241



 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 41/89 (46%), Positives = 59/89 (66%), Gaps = 1/89 (1%)
 Frame = +1

Query: 61  VFSAFGFVHKITTFEKTAGFQALVQFTDSETASSAKDALDGRSIPSYLIPELTPCSLRIT 240
           VFS+FG V KI  F+K  G QAL+Q+ D +TA  AK+AL+G     + I +   C L ++
Sbjct: 265 VFSSFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEG-----HCIYDGGFCKLHLS 319

Query: 241 YSAHTDLTVKFQSHRSRDYTNP-SLPVNP 324
           YS H+DL++K  + RSRDYT P ++ +NP
Sbjct: 320 YSRHSDLSIKVNNDRSRDYTIPNTVMMNP 348


>ref|XP_002513582.1| polypyrimidine tract binding protein, putative [Ricinus communis]
           gi|223547490|gb|EEF48985.1| polypyrimidine tract binding
           protein, putative [Ricinus communis]
          Length = 447

 Score =  184 bits (468), Expect = 5e-45
 Identities = 90/109 (82%), Positives = 102/109 (93%), Gaps = 1/109 (0%)
 Frame = +1

Query: 61  VFSAFGFVHKITTFEKTAGFQALVQFTDSETASSAKDALDGRSIPSYLIPE-LTPCSLRI 237
           VFSAFGFVHKITTFEKTAGFQALVQF+D+ETASSAK+ALDGR+IP YL+PE + PC+LRI
Sbjct: 133 VFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNALDGRNIPRYLLPEHIGPCTLRI 192

Query: 238 TYSAHTDLTVKFQSHRSRDYTNPSLPVNPSAIDATGQISMGLDGKKLEP 384
           TYSAHTDL+VKFQSHRSRDYTNP+LPV PSAID +G  ++GLDGKKLEP
Sbjct: 193 TYSAHTDLSVKFQSHRSRDYTNPNLPVAPSAIDGSGMFTVGLDGKKLEP 241



 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 45/90 (50%), Positives = 60/90 (66%), Gaps = 2/90 (2%)
 Frame = +1

Query: 61  VFSAFGFVHKITTFEKTAGFQALVQFTDSETASSAKDALDGRSIPSYLIPELTPCSLRIT 240
           VFSAFG V KI  F+K  G QAL+Q+ D +TA  AK+AL+G     + I +   C L I+
Sbjct: 265 VFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEG-----HCIYDGGFCKLHIS 319

Query: 241 YSAHTDLTVKFQSHRSRDYT--NPSLPVNP 324
           YS H+DL++K  + RSRDYT  NP++ VNP
Sbjct: 320 YSRHSDLSIKVNNDRSRDYTIPNPAM-VNP 348