BLASTX nr result

ID: Bupleurum21_contig00018684 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00018684
         (322 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634092.1| PREDICTED: polypyrimidine tract-binding prot...   176   2e-42
emb|CBI22535.3| unnamed protein product [Vitis vinifera]              176   2e-42
emb|CAN66869.1| hypothetical protein VITISV_013673 [Vitis vinifera]   176   2e-42
ref|XP_004168482.1| PREDICTED: polypyrimidine tract-binding prot...   176   2e-42
ref|XP_004145983.1| PREDICTED: polypyrimidine tract-binding prot...   176   2e-42

>ref|XP_003634092.1| PREDICTED: polypyrimidine tract-binding protein homolog 2-like
           [Vitis vinifera]
          Length = 446

 Score =  176 bits (446), Expect = 2e-42
 Identities = 88/106 (83%), Positives = 93/106 (87%)
 Frame = +3

Query: 3   WECTEDELIELGKPFGKVVNTKCNVGANRNQAFIEFAELNQXXXXXXXXXXXXEPAQVRG 182
           WECTE+ELIELGKPFGKVVNTKCNVGANRNQAFIEFA+LNQ            EPAQVRG
Sbjct: 27  WECTEEELIELGKPFGKVVNTKCNVGANRNQAFIEFADLNQAIAMISYYASSSEPAQVRG 86

Query: 183 KTVYLQYSNRQEIVNNKTTADVAGNVLLVTIEGNDARLVSIEVLHV 320
           KTVYLQYSNRQEIVNNKT+ADVAGNVLLVTIEG DARLVSI+VLH+
Sbjct: 87  KTVYLQYSNRQEIVNNKTSADVAGNVLLVTIEGADARLVSIDVLHL 132


>emb|CBI22535.3| unnamed protein product [Vitis vinifera]
          Length = 1311

 Score =  176 bits (446), Expect = 2e-42
 Identities = 88/106 (83%), Positives = 93/106 (87%)
 Frame = +3

Query: 3   WECTEDELIELGKPFGKVVNTKCNVGANRNQAFIEFAELNQXXXXXXXXXXXXEPAQVRG 182
           WECTE+ELIELGKPFGKVVNTKCNVGANRNQAFIEFA+LNQ            EPAQVRG
Sbjct: 27  WECTEEELIELGKPFGKVVNTKCNVGANRNQAFIEFADLNQAIAMISYYASSSEPAQVRG 86

Query: 183 KTVYLQYSNRQEIVNNKTTADVAGNVLLVTIEGNDARLVSIEVLHV 320
           KTVYLQYSNRQEIVNNKT+ADVAGNVLLVTIEG DARLVSI+VLH+
Sbjct: 87  KTVYLQYSNRQEIVNNKTSADVAGNVLLVTIEGADARLVSIDVLHL 132


>emb|CAN66869.1| hypothetical protein VITISV_013673 [Vitis vinifera]
          Length = 755

 Score =  176 bits (446), Expect = 2e-42
 Identities = 88/106 (83%), Positives = 93/106 (87%)
 Frame = +3

Query: 3   WECTEDELIELGKPFGKVVNTKCNVGANRNQAFIEFAELNQXXXXXXXXXXXXEPAQVRG 182
           WECTE+ELIELGKPFGKVVNTKCNVGANRNQAFIEFA+LNQ            EPAQVRG
Sbjct: 336 WECTEEELIELGKPFGKVVNTKCNVGANRNQAFIEFADLNQAIAMISYYASSSEPAQVRG 395

Query: 183 KTVYLQYSNRQEIVNNKTTADVAGNVLLVTIEGNDARLVSIEVLHV 320
           KTVYLQYSNRQEIVNNKT+ADVAGNVLLVTIEG DARLVSI+VLH+
Sbjct: 396 KTVYLQYSNRQEIVNNKTSADVAGNVLLVTIEGADARLVSIDVLHL 441


>ref|XP_004168482.1| PREDICTED: polypyrimidine tract-binding protein homolog 2-like
           [Cucumis sativus]
          Length = 457

 Score =  176 bits (445), Expect = 2e-42
 Identities = 87/106 (82%), Positives = 92/106 (86%)
 Frame = +3

Query: 3   WECTEDELIELGKPFGKVVNTKCNVGANRNQAFIEFAELNQXXXXXXXXXXXXEPAQVRG 182
           WECTE+ELIELGKPFGKVVNTKCNVGANRNQAFIEFA++NQ            EPAQVRG
Sbjct: 27  WECTEEELIELGKPFGKVVNTKCNVGANRNQAFIEFADINQAIAMISYYASSSEPAQVRG 86

Query: 183 KTVYLQYSNRQEIVNNKTTADVAGNVLLVTIEGNDARLVSIEVLHV 320
           KTVYLQYSNRQEIVNNKTTADV GNVLLVTIEG DARLVSI+VLH+
Sbjct: 87  KTVYLQYSNRQEIVNNKTTADVPGNVLLVTIEGTDARLVSIDVLHL 132


>ref|XP_004145983.1| PREDICTED: polypyrimidine tract-binding protein homolog 1-like
           [Cucumis sativus]
          Length = 776

 Score =  176 bits (445), Expect = 2e-42
 Identities = 87/106 (82%), Positives = 92/106 (86%)
 Frame = +3

Query: 3   WECTEDELIELGKPFGKVVNTKCNVGANRNQAFIEFAELNQXXXXXXXXXXXXEPAQVRG 182
           WECTE+ELIELGKPFGKVVNTKCNVGANRNQAFIEFA++NQ            EPAQVRG
Sbjct: 350 WECTEEELIELGKPFGKVVNTKCNVGANRNQAFIEFADINQAIAMISYYASSSEPAQVRG 409

Query: 183 KTVYLQYSNRQEIVNNKTTADVAGNVLLVTIEGNDARLVSIEVLHV 320
           KTVYLQYSNRQEIVNNKTTADV GNVLLVTIEG DARLVSI+VLH+
Sbjct: 410 KTVYLQYSNRQEIVNNKTTADVPGNVLLVTIEGTDARLVSIDVLHL 455


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