BLASTX nr result

ID: Bupleurum21_contig00018670 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00018670
         (562 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511726.1| DNA binding protein, putative [Ricinus commu...    68   9e-10
ref|NP_001241091.1| uncharacterized protein LOC100796830 [Glycin...    63   3e-08
ref|XP_002320727.1| predicted protein [Populus trichocarpa] gi|2...    62   5e-08
ref|XP_003534610.1| PREDICTED: uncharacterized protein LOC100791...    61   1e-07
ref|XP_003552341.1| PREDICTED: uncharacterized protein LOC100777...    60   2e-07

>ref|XP_002511726.1| DNA binding protein, putative [Ricinus communis]
           gi|223548906|gb|EEF50395.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 324

 Score = 68.2 bits (165), Expect = 9e-10
 Identities = 41/70 (58%), Positives = 47/70 (67%), Gaps = 5/70 (7%)
 Frame = -3

Query: 203 MESSEGIDSAGVTVIPGEAPSSYHVNPRFDNSSQV-----TRLSQAPLPLGSVMDGNLEK 39
           ME+ EG+ S GVTVI  EAPS+YHV PR +NSSQ+       +SQA L L     G  EK
Sbjct: 1   METREGLTS-GVTVIGAEAPSTYHVAPRTENSSQIAGSPAVAMSQASLGL----TGTTEK 55

Query: 38  KKRGRPRKYG 9
           KKRGRPRKYG
Sbjct: 56  KKRGRPRKYG 65


>ref|NP_001241091.1| uncharacterized protein LOC100796830 [Glycine max]
           gi|255644758|gb|ACU22881.1| unknown [Glycine max]
          Length = 346

 Score = 63.2 bits (152), Expect = 3e-08
 Identities = 38/75 (50%), Positives = 48/75 (64%), Gaps = 10/75 (13%)
 Frame = -3

Query: 203 MESSEGIDSAGVTVIPGEAPSSYHVNPRFDNSSQV-------TRLSQAPL---PLGSVMD 54
           ME+ EGI S+GVTVI  EAPS+YHV PR +  +QV          + AP+   P+ + +D
Sbjct: 1   MEAREGI-SSGVTVIGAEAPSAYHVAPRSEAPNQVHVPDGGGAAATAAPVGVSPVSAGLD 59

Query: 53  GNLEKKKRGRPRKYG 9
           G   KKKRGRPRKYG
Sbjct: 60  GTAVKKKRGRPRKYG 74


>ref|XP_002320727.1| predicted protein [Populus trichocarpa] gi|222861500|gb|EEE99042.1|
           predicted protein [Populus trichocarpa]
          Length = 324

 Score = 62.4 bits (150), Expect = 5e-08
 Identities = 36/68 (52%), Positives = 46/68 (67%), Gaps = 3/68 (4%)
 Frame = -3

Query: 203 MESSEGIDSAGVTVIPGEAPSSYHVNPRFDNSSQVTRLSQA--PLPLGS-VMDGNLEKKK 33
           ME  EG+ S+GVTVI  EAPS+YH+ PR +N  Q+     A    P+G+ ++ G  EKKK
Sbjct: 1   MEGREGL-SSGVTVIGAEAPSTYHMAPRTENPGQIVVSPPAVEVPPVGAGLIGGTAEKKK 59

Query: 32  RGRPRKYG 9
           RGRPRKYG
Sbjct: 60  RGRPRKYG 67


>ref|XP_003534610.1| PREDICTED: uncharacterized protein LOC100791563 [Glycine max]
          Length = 337

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 37/74 (50%), Positives = 45/74 (60%), Gaps = 9/74 (12%)
 Frame = -3

Query: 203 MESSEGIDSAGVTVIPGEAPSSYHVNPRFDNSSQVT---------RLSQAPLPLGSVMDG 51
           ME  EGI S+GVTVI  EAPS+YH+ PR +  SQV           +  +P  +G  +DG
Sbjct: 1   MEGREGI-SSGVTVIGAEAPSAYHMAPRSEAPSQVPPPVPEATAGAIGVSPASVG--LDG 57

Query: 50  NLEKKKRGRPRKYG 9
              KKKRGRPRKYG
Sbjct: 58  TAAKKKRGRPRKYG 71


>ref|XP_003552341.1| PREDICTED: uncharacterized protein LOC100777213 [Glycine max]
          Length = 338

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 36/74 (48%), Positives = 45/74 (60%), Gaps = 9/74 (12%)
 Frame = -3

Query: 203 MESSEGIDSAGVTVIPGEAPSSYHVNPRFDNSSQVT---------RLSQAPLPLGSVMDG 51
           ME  EG  S+GVTVI  EAPS+YH+ PR +  SQV           +  +P+ +G  +DG
Sbjct: 3   MEGREGF-SSGVTVIGAEAPSAYHMAPRSEAPSQVPPPVPEATAGAIGVSPVSVG--LDG 59

Query: 50  NLEKKKRGRPRKYG 9
              KKKRGRPRKYG
Sbjct: 60  TAAKKKRGRPRKYG 73


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