BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00018655
         (318 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282614.1| PREDICTED: RNA pseudourine synthase 4, mitoc...   166   2e-39
ref|XP_002313876.1| predicted protein [Populus trichocarpa] gi|2...   150   8e-35
ref|XP_002518674.1| ribosomal pseudouridine synthase, putative [...   147   1e-33
ref|XP_003635999.1| RNA pseudourine synthase [Medicago truncatul...   143   1e-32
ref|XP_003516775.1| PREDICTED: RNA pseudourine synthase 4, mitoc...   141   6e-32

>ref|XP_002282614.1| PREDICTED: RNA pseudourine synthase 4, mitochondrial [Vitis
           vinifera] gi|296090438|emb|CBI40257.3| unnamed protein
           product [Vitis vinifera]
          Length = 476

 Score =  166 bits (420), Expect = 2e-39
 Identities = 78/105 (74%), Positives = 92/105 (87%)
 Frame = -3

Query: 316 LVMGRTQLSATVLHSIFREKTYGASTEDLEGKTGILQRKYWALVLGSPRRRHGIVSQPLG 137
           L+MGRTQ SAT+LHSIFREKT+GAS  D++ K  ILQR+YWALV+GSPRR  G++S PLG
Sbjct: 244 LIMGRTQTSATILHSIFREKTFGASNNDIDTKKRILQRRYWALVIGSPRRPRGLISAPLG 303

Query: 136 KVVMDDGKSERITVIDNAQSMPSQHAITEYRVIGSSSNGYTWLEL 2
           KVV+DDGKSERIT++DN Q+M SQHAITEYRVI SS +GYTWLEL
Sbjct: 304 KVVVDDGKSERITIVDNVQTMSSQHAITEYRVIKSSCHGYTWLEL 348


>ref|XP_002313876.1| predicted protein [Populus trichocarpa] gi|222850284|gb|EEE87831.1|
           predicted protein [Populus trichocarpa]
          Length = 324

 Score =  150 bits (380), Expect = 8e-35
 Identities = 73/105 (69%), Positives = 91/105 (86%)
 Frame = -3

Query: 316 LVMGRTQLSATVLHSIFREKTYGASTEDLEGKTGILQRKYWALVLGSPRRRHGIVSQPLG 137
           LVMGRTQ SATVLH+IFREKT  AS +D+  K  ILQRKYWALV+GSPRR  G++S PLG
Sbjct: 95  LVMGRTQTSATVLHAIFREKTLAASNDDVGNKRRILQRKYWALVIGSPRRPKGLISAPLG 154

Query: 136 KVVMDDGKSERITVIDNAQSMPSQHAITEYRVIGSSSNGYTWLEL 2
           KVV+D+GKS+RITV++N+Q++ SQHA+T+YRVI  SS+G+TWLEL
Sbjct: 155 KVVVDNGKSDRITVVENSQNLSSQHAVTQYRVI-ESSHGFTWLEL 198


>ref|XP_002518674.1| ribosomal pseudouridine synthase, putative [Ricinus communis]
           gi|223542055|gb|EEF43599.1| ribosomal pseudouridine
           synthase, putative [Ricinus communis]
          Length = 536

 Score =  147 bits (370), Expect = 1e-33
 Identities = 71/105 (67%), Positives = 87/105 (82%)
 Frame = -3

Query: 316 LVMGRTQLSATVLHSIFREKTYGASTEDLEGKTGILQRKYWALVLGSPRRRHGIVSQPLG 137
           LVMGRTQ S  VLHS+FREKT+ AS  D+  +  ILQRKYWALV+GSPRR+ GI+S PLG
Sbjct: 305 LVMGRTQTSTMVLHSVFREKTFAASNHDIGERRRILQRKYWALVIGSPRRQKGIISAPLG 364

Query: 136 KVVMDDGKSERITVIDNAQSMPSQHAITEYRVIGSSSNGYTWLEL 2
           KVV+DDGKS+RITV++NA+S   QHA+T+YRV+  SS+GY WLEL
Sbjct: 365 KVVVDDGKSDRITVVENAESTSFQHAVTQYRVM-ESSHGYAWLEL 408


>ref|XP_003635999.1| RNA pseudourine synthase [Medicago truncatula]
           gi|355501934|gb|AES83137.1| RNA pseudourine synthase
           [Medicago truncatula]
          Length = 430

 Score =  143 bits (361), Expect = 1e-32
 Identities = 69/105 (65%), Positives = 87/105 (82%)
 Frame = -3

Query: 316 LVMGRTQLSATVLHSIFREKTYGASTEDLEGKTGILQRKYWALVLGSPRRRHGIVSQPLG 137
           LVMGRT+ S  +LHSIFREKT  AS E+ + +  ILQR+YWALVLG PRR  G+V+ PLG
Sbjct: 197 LVMGRTKTSTALLHSIFREKTSRASNEENDTEKIILQRRYWALVLGCPRRSGGVVNAPLG 256

Query: 136 KVVMDDGKSERITVIDNAQSMPSQHAITEYRVIGSSSNGYTWLEL 2
           KVV+D+GKS+RIT++DN+  + SQHA+TEYRVI SSS+G+TWLEL
Sbjct: 257 KVVVDNGKSDRITIVDNSALLSSQHAVTEYRVISSSSHGFTWLEL 301


>ref|XP_003516775.1| PREDICTED: RNA pseudourine synthase 4, mitochondrial-like [Glycine
           max]
          Length = 427

 Score =  141 bits (355), Expect = 6e-32
 Identities = 72/105 (68%), Positives = 85/105 (80%)
 Frame = -3

Query: 316 LVMGRTQLSATVLHSIFREKTYGASTEDLEGKTGILQRKYWALVLGSPRRRHGIVSQPLG 137
           LVMGRT  S TVLHSIFREKT  AS +D+  +  ILQR+YWALVLG PRR  G+V+  LG
Sbjct: 197 LVMGRTHTSTTVLHSIFREKTSRAS-DDIGKEKRILQRRYWALVLGCPRRPKGLVTASLG 255

Query: 136 KVVMDDGKSERITVIDNAQSMPSQHAITEYRVIGSSSNGYTWLEL 2
           KVV+D+G+S+RIT++DN+  M SQHAITEYRVI SSS GYTWLEL
Sbjct: 256 KVVVDNGRSDRITIVDNSTLMSSQHAITEYRVIASSSQGYTWLEL 300