BLASTX nr result

ID: Bupleurum21_contig00018648 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00018648
         (1220 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521882.1| pentatricopeptide repeat-containing protein,...   465   e-128
ref|XP_002315829.1| predicted protein [Populus trichocarpa] gi|2...   459   e-127
ref|XP_002273214.2| PREDICTED: uncharacterized protein At4g15970...   439   e-121
ref|XP_002311563.1| predicted protein [Populus trichocarpa] gi|2...   439   e-121
ref|XP_003535750.1| PREDICTED: uncharacterized protein At4g15970...   437   e-120

>ref|XP_002521882.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223538920|gb|EEF40518.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 394

 Score =  465 bits (1196), Expect = e-128
 Identities = 219/308 (71%), Positives = 258/308 (83%)
 Frame = -3

Query: 996 FPLIDSTDSFSRFRYVSPDSDEIRLERVLKNAAMPDKTVILTTANEAWAASNTILELFLE 817
           FP    TDS        P S+E +LE+VLK AAM DKTVILTT NEAWAA N++++LFL 
Sbjct: 83  FPSAVDTDSL-------PVSNEQKLEKVLKEAAMKDKTVILTTLNEAWAAPNSVIDLFLA 135

Query: 816 SFRSGVGTRKLLNHLVVIALDQRAYYRCKDLHSHCFALGTQGVNFSQEAVFLSPDYLNMM 637
           SFR G  TRKLLNHLV+IALDQ+A  RC  +H HCFAL T G++FS EA F++P YL MM
Sbjct: 136 SFRLGEHTRKLLNHLVIIALDQKANARCIQVHDHCFALLTDGIDFSNEAYFMTPAYLKMM 195

Query: 636 WRRIDFLRCVLEMGYNFLFTDADIMWFRNPFPHFYEDTDFQIACDHFSGNSTDVESSILN 457
           WRRIDFLR VLEMGYNF+FTDADIMWFR+PFP FY D DFQIACDHF+G+S ++ +   N
Sbjct: 196 WRRIDFLRSVLEMGYNFVFTDADIMWFRDPFPRFYSDADFQIACDHFTGSSINIHNK-PN 254

Query: 456 GGFNLVKSNNQSVEFYKYWYSSREKFPGLHDQDVLNRIKSHTFVADIGLKMRFLDTAYFG 277
           GGFN V+SNN+S+EFYK+WYSSRE +PG+HDQDVLN+IK+ +F+ D+GLKMRFLDTA+FG
Sbjct: 255 GGFNYVRSNNRSIEFYKFWYSSRETYPGIHDQDVLNKIKNASFIEDLGLKMRFLDTAFFG 314

Query: 276 GFCEPSKDLNQVCTMHANCCIGLESKVHDLRIMLQDWRRFLSLPPTLKRSSIVSWRVPQN 97
           G CEPSKDLN VCTMHANCC GLESK+HDLRIMLQDW+RFLSLPP+LKRSS+VSWRVPQN
Sbjct: 315 GLCEPSKDLNLVCTMHANCCYGLESKLHDLRIMLQDWKRFLSLPPSLKRSSVVSWRVPQN 374

Query: 96  CSLELLQH 73
           CSL+ L+H
Sbjct: 375 CSLDSLRH 382


>ref|XP_002315829.1| predicted protein [Populus trichocarpa] gi|222864869|gb|EEF02000.1|
            predicted protein [Populus trichocarpa]
          Length = 404

 Score =  459 bits (1182), Expect = e-127
 Identities = 220/342 (64%), Positives = 265/342 (77%), Gaps = 13/342 (3%)
 Frame = -3

Query: 1053 FIGVSLSGYILFKAADVAGFP-------------LIDSTDSFSRFRYVSPDSDEIRLERV 913
            F+ +S+S  +L+ AAD   F              L +S +S S+        D+ +LE+V
Sbjct: 52   FVAISVSVLLLYGAADSLRFQSSSSGYSFNIFPSLRNSNNSDSKLSINDDGDDDYKLEKV 111

Query: 912  LKNAAMPDKTVILTTANEAWAASNTILELFLESFRSGVGTRKLLNHLVVIALDQRAYYRC 733
            LK AAM DKTVI+ T NEAWAA NTI++LFLESFR G GTR+LLNHLV++ALD++AY RC
Sbjct: 112  LKEAAMEDKTVIIATLNEAWAAPNTIIDLFLESFRIGQGTRRLLNHLVIVALDRKAYKRC 171

Query: 732  KDLHSHCFALGTQGVNFSQEAVFLSPDYLNMMWRRIDFLRCVLEMGYNFLFTDADIMWFR 553
             + H+HCFAL TQG++F  EA F++P YL MMWRRIDFLR VL+MGYNF+FTDADIMWFR
Sbjct: 172  MEFHAHCFALVTQGLDFHDEAYFMTPAYLEMMWRRIDFLRAVLQMGYNFVFTDADIMWFR 231

Query: 552  NPFPHFYEDTDFQIACDHFSGNSTDVESSILNGGFNLVKSNNQSVEFYKYWYSSREKFPG 373
            +PFP FY D DFQIACDHF GNS+D+++   NGGFN VKSNN+++EFYK+WYSSRE +PG
Sbjct: 232  DPFPRFYLDADFQIACDHFLGNSSDIQNR-PNGGFNYVKSNNRTIEFYKFWYSSRETYPG 290

Query: 372  LHDQDVLNRIKSHTFVADIGLKMRFLDTAYFGGFCEPSKDLNQVCTMHANCCIGLESKVH 193
             HDQDVLN IK   F+ D+GLKMRFLDTA+FGG CEPSKDLN VCTMHANCC GL+SK+H
Sbjct: 291  YHDQDVLNFIKFDPFIEDLGLKMRFLDTAFFGGLCEPSKDLNLVCTMHANCCYGLDSKLH 350

Query: 192  DLRIMLQDWRRFLSLPPTLKRSSIVSWRVPQNCSLELLQHND 67
            DLRIMLQDW+ FLSLPP LKRSS + W VPQNCSL  L+  D
Sbjct: 351  DLRIMLQDWKTFLSLPPALKRSSSMLWTVPQNCSLNSLRRYD 392


>ref|XP_002273214.2| PREDICTED: uncharacterized protein At4g15970 [Vitis vinifera]
          Length = 415

 Score =  439 bits (1130), Expect = e-121
 Identities = 205/290 (70%), Positives = 247/290 (85%)
 Frame = -3

Query: 945 PDSDEIRLERVLKNAAMPDKTVILTTANEAWAASNTILELFLESFRSGVGTRKLLNHLVV 766
           P+++E+RLERVLK+AAM D TVILTT NEAWAA +++++LFLESFR G  TR+ LNHLV+
Sbjct: 112 PENEELRLERVLKDAAMEDHTVILTTLNEAWAAPDSVIDLFLESFRIGDHTRRYLNHLVI 171

Query: 765 IALDQRAYYRCKDLHSHCFALGTQGVNFSQEAVFLSPDYLNMMWRRIDFLRCVLEMGYNF 586
           IALDQ+A+ RC  LH+HCF L T+GV+FS EA F++ DYL MMWRRIDFLR VLEMGYNF
Sbjct: 172 IALDQKAFARCLILHNHCFTLVTEGVDFSGEAYFMTSDYLKMMWRRIDFLRSVLEMGYNF 231

Query: 585 LFTDADIMWFRNPFPHFYEDTDFQIACDHFSGNSTDVESSILNGGFNLVKSNNQSVEFYK 406
           +F+DADIMWFR+PFPHF  + DFQIACDHF G+  +V +   NGGFN V+SNN+S+EFYK
Sbjct: 232 IFSDADIMWFRDPFPHFLPNADFQIACDHFLGDPYNVNNR-PNGGFNYVRSNNRSIEFYK 290

Query: 405 YWYSSREKFPGLHDQDVLNRIKSHTFVADIGLKMRFLDTAYFGGFCEPSKDLNQVCTMHA 226
           +WYSSRE +PGLHDQDVLN IK   F+ +IGL+MRFLDTA+FGG CEPSKDLN V TMHA
Sbjct: 291 FWYSSRETYPGLHDQDVLNIIKFDPFIMNIGLEMRFLDTAHFGGLCEPSKDLNLVSTMHA 350

Query: 225 NCCIGLESKVHDLRIMLQDWRRFLSLPPTLKRSSIVSWRVPQNCSLELLQ 76
           NCC GLESK+HDLRIMLQDW+ ++SLPP+LKRSS  +WRVPQNCSL+ LQ
Sbjct: 351 NCCFGLESKLHDLRIMLQDWKEYMSLPPSLKRSSEATWRVPQNCSLDALQ 400


>ref|XP_002311563.1| predicted protein [Populus trichocarpa] gi|222851383|gb|EEE88930.1|
           predicted protein [Populus trichocarpa]
          Length = 277

 Score =  439 bits (1129), Expect = e-121
 Identities = 202/278 (72%), Positives = 238/278 (85%)
 Frame = -3

Query: 927 RLERVLKNAAMPDKTVILTTANEAWAASNTILELFLESFRSGVGTRKLLNHLVVIALDQR 748
           +LE+VLK AAM DKTVI+ T NEAWAA NT+++LFLESFR G GTR+LL+HLV++ALD++
Sbjct: 1   KLEKVLKEAAMEDKTVIIATLNEAWAAPNTVIDLFLESFRIGQGTRRLLDHLVIVALDEK 60

Query: 747 AYYRCKDLHSHCFALGTQGVNFSQEAVFLSPDYLNMMWRRIDFLRCVLEMGYNFLFTDAD 568
           AY RC +LH+HCFAL TQG++F  EA F++  YL MMWRRIDFLR +LEMGYNF+FTDAD
Sbjct: 61  AYRRCMELHTHCFALVTQGLDFHDEAYFMTHVYLEMMWRRIDFLRSLLEMGYNFVFTDAD 120

Query: 567 IMWFRNPFPHFYEDTDFQIACDHFSGNSTDVESSILNGGFNLVKSNNQSVEFYKYWYSSR 388
           IMWFR+PFP F+ D DFQIACDHFSGNS+D+++   NGGFN VKSN +S+EFYK+WYSSR
Sbjct: 121 IMWFRDPFPRFFLDADFQIACDHFSGNSSDIQNR-PNGGFNYVKSNKRSIEFYKFWYSSR 179

Query: 387 EKFPGLHDQDVLNRIKSHTFVADIGLKMRFLDTAYFGGFCEPSKDLNQVCTMHANCCIGL 208
           E +PG HDQDVLN IK   F+  +GLKMRFLDTA+FGG CEPSKDLN VCTMHANCC GL
Sbjct: 180 ETYPGFHDQDVLNFIKFDPFIESLGLKMRFLDTAFFGGLCEPSKDLNLVCTMHANCCFGL 239

Query: 207 ESKVHDLRIMLQDWRRFLSLPPTLKRSSIVSWRVPQNC 94
           +SK+HDL IMLQDW+ FLSLPPTLKRS  VSWRVPQNC
Sbjct: 240 DSKLHDLGIMLQDWKTFLSLPPTLKRSLSVSWRVPQNC 277


>ref|XP_003535750.1| PREDICTED: uncharacterized protein At4g15970-like [Glycine max]
          Length = 364

 Score =  437 bits (1125), Expect = e-120
 Identities = 216/356 (60%), Positives = 266/356 (74%), Gaps = 9/356 (2%)
 Frame = -3

Query: 1080 RRLLILFVFFIGVSLSGYILFKAADVAGF-PLIDSTDSFSRFRYVSPD--------SDEI 928
            RR +    FF  VSLS  +L    D   F     S+ S S F  + P         S+E 
Sbjct: 11   RRAVAASFFFATVSLSCLVLLGDVDSHRFLSSFHSSYSLSGFTRIFPSVYNDPVATSNEY 70

Query: 927  RLERVLKNAAMPDKTVILTTANEAWAASNTILELFLESFRSGVGTRKLLNHLVVIALDQR 748
             LE++L +AAM D+TVILTT NEAWA  N++++LFLESFR G  T   LNHLV+IALDQ+
Sbjct: 71   PLEKILNDAAMKDRTVILTTLNEAWATPNSVIDLFLESFRIGDRTSTFLNHLVIIALDQK 130

Query: 747  AYYRCKDLHSHCFALGTQGVNFSQEAVFLSPDYLNMMWRRIDFLRCVLEMGYNFLFTDAD 568
            A+ RC+ +H+HCF+L ++  +F +EA F++P YL MMW+RIDFLR VLEMGYNF+FTDAD
Sbjct: 131  AFARCQVIHTHCFSLVSEEADFHEEAYFMTPRYLMMMWKRIDFLRTVLEMGYNFVFTDAD 190

Query: 567  IMWFRNPFPHFYEDTDFQIACDHFSGNSTDVESSILNGGFNLVKSNNQSVEFYKYWYSSR 388
            IMWFR+PFP F    DFQIACDHF+G   DV++   NGGFN VKSNN+S+EFYK+WYSSR
Sbjct: 191  IMWFRDPFPQFDLHADFQIACDHFTGGFDDVQNRP-NGGFNYVKSNNRSIEFYKFWYSSR 249

Query: 387  EKFPGLHDQDVLNRIKSHTFVADIGLKMRFLDTAYFGGFCEPSKDLNQVCTMHANCCIGL 208
            E +PG HDQDVLN IK H F+ DIGLKMRFLDT  FGG CEPS+DLNQVCTMHANCC+G+
Sbjct: 250  ETYPGYHDQDVLNFIKVHPFITDIGLKMRFLDTTNFGGLCEPSRDLNQVCTMHANCCLGM 309

Query: 207  ESKVHDLRIMLQDWRRFLSLPPTLKRSSIVSWRVPQNCSLELLQHNDHSLEEDADE 40
            +SK+HDLRIMLQDW+ +LSLPP+LKR S+VSWRVPQ CS+E L H  +S E+  +E
Sbjct: 310  DSKLHDLRIMLQDWKHYLSLPPSLKRLSVVSWRVPQKCSIESLLH-PNSTEKSVEE 364


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