BLASTX nr result

ID: Bupleurum21_contig00018640 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00018640
         (489 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316909.1| predicted protein [Populus trichocarpa] gi|2...   139   3e-31
emb|CAA73132.1| hypothetical protein [Silene latifolia]               130   1e-28
ref|XP_002284846.1| PREDICTED: leucine-rich repeat-containing pr...   127   1e-27
ref|XP_003634682.1| PREDICTED: leucine-rich repeat-containing pr...   127   1e-27
ref|XP_004133702.1| PREDICTED: leucine-rich repeat-containing pr...   124   8e-27

>ref|XP_002316909.1| predicted protein [Populus trichocarpa] gi|222859974|gb|EEE97521.1|
           predicted protein [Populus trichocarpa]
          Length = 580

 Score =  139 bits (349), Expect = 3e-31
 Identities = 80/133 (60%), Positives = 84/133 (63%)
 Frame = +2

Query: 86  MDRVLKAARASGXXXXXXXXXXEVPDEVYKSLDAVGXXXXXXXXXXXXXXXXXXXXXXXX 265
           MDRVLKAAR+SG          EVPDEVYK LDAVG                        
Sbjct: 1   MDRVLKAARSSGSLNLSNRSLSEVPDEVYKILDAVGE----------------------- 37

Query: 266 XXXXXXXGENWWEAVELQKLILAHNNIETLKEDLRNLPQLTVLNVSHNKLSHLPAAIGEL 445
                  GE WWE VELQKLILAHNNIE +KEDL+NL QLTVLNVSHNKLS LPAAIGEL
Sbjct: 38  -------GEKWWENVELQKLILAHNNIEAIKEDLKNLSQLTVLNVSHNKLSALPAAIGEL 90

Query: 446 QMLKSLDVSFNLL 484
            MLK LDVSFNL+
Sbjct: 91  PMLKLLDVSFNLI 103


>emb|CAA73132.1| hypothetical protein [Silene latifolia]
          Length = 581

 Score =  130 bits (326), Expect = 1e-28
 Identities = 74/133 (55%), Positives = 80/133 (60%)
 Frame = +2

Query: 86  MDRVLKAARASGXXXXXXXXXXEVPDEVYKSLDAVGXXXXXXXXXXXXXXXXXXXXXXXX 265
           MDR+LKAAR SG          +VP EVYK+ D                           
Sbjct: 1   MDRLLKAARTSGSLNLSNRSLRDVPIEVYKNFDGA------------------------- 35

Query: 266 XXXXXXXGENWWEAVELQKLILAHNNIETLKEDLRNLPQLTVLNVSHNKLSHLPAAIGEL 445
                  GENWWE V+LQKLILAHNNIE LKEDL+NLP LTVLNVSHNKL+ LPAAIGEL
Sbjct: 36  -----PEGENWWETVDLQKLILAHNNIEVLKEDLKNLPLLTVLNVSHNKLTQLPAAIGEL 90

Query: 446 QMLKSLDVSFNLL 484
             LKSLDVSFNLL
Sbjct: 91  PSLKSLDVSFNLL 103


>ref|XP_002284846.1| PREDICTED: leucine-rich repeat-containing protein 40-like isoform 1
           [Vitis vinifera]
          Length = 588

 Score =  127 bits (318), Expect = 1e-27
 Identities = 72/131 (54%), Positives = 83/131 (63%)
 Frame = +2

Query: 86  MDRVLKAARASGXXXXXXXXXXEVPDEVYKSLDAVGXXXXXXXXXXXXXXXXXXXXXXXX 265
           M+R LKAARASG          EVPDEVY+SLDA+G                        
Sbjct: 1   MERALKAARASGSLNLSNRALREVPDEVYRSLDAIGE----------------------- 37

Query: 266 XXXXXXXGENWWEAVELQKLILAHNNIETLKEDLRNLPQLTVLNVSHNKLSHLPAAIGEL 445
                  GE WWEAVELQKLILAHN+IE+L+EDL+NL  L+VLN+S+NKL HLPAAIGEL
Sbjct: 38  -------GEKWWEAVELQKLILAHNDIESLREDLKNLSLLSVLNLSNNKLVHLPAAIGEL 90

Query: 446 QMLKSLDVSFN 478
            MLKSLD+S N
Sbjct: 91  PMLKSLDLSQN 101


>ref|XP_003634682.1| PREDICTED: leucine-rich repeat-containing protein 40-like isoform 2
           [Vitis vinifera] gi|302143032|emb|CBI20327.3| unnamed
           protein product [Vitis vinifera]
          Length = 584

 Score =  127 bits (318), Expect = 1e-27
 Identities = 72/131 (54%), Positives = 83/131 (63%)
 Frame = +2

Query: 86  MDRVLKAARASGXXXXXXXXXXEVPDEVYKSLDAVGXXXXXXXXXXXXXXXXXXXXXXXX 265
           M+R LKAARASG          EVPDEVY+SLDA+G                        
Sbjct: 1   MERALKAARASGSLNLSNRALREVPDEVYRSLDAIGE----------------------- 37

Query: 266 XXXXXXXGENWWEAVELQKLILAHNNIETLKEDLRNLPQLTVLNVSHNKLSHLPAAIGEL 445
                  GE WWEAVELQKLILAHN+IE+L+EDL+NL  L+VLN+S+NKL HLPAAIGEL
Sbjct: 38  -------GEKWWEAVELQKLILAHNDIESLREDLKNLSLLSVLNLSNNKLVHLPAAIGEL 90

Query: 446 QMLKSLDVSFN 478
            MLKSLD+S N
Sbjct: 91  PMLKSLDLSQN 101


>ref|XP_004133702.1| PREDICTED: leucine-rich repeat-containing protein 40-like [Cucumis
           sativus] gi|449478165|ref|XP_004155239.1| PREDICTED:
           leucine-rich repeat-containing protein 40-like [Cucumis
           sativus]
          Length = 583

 Score =  124 bits (311), Expect = 8e-27
 Identities = 73/133 (54%), Positives = 78/133 (58%)
 Frame = +2

Query: 86  MDRVLKAARASGXXXXXXXXXXEVPDEVYKSLDAVGXXXXXXXXXXXXXXXXXXXXXXXX 265
           MDR+LKAARASG          +VP EVY+SLDAV                         
Sbjct: 1   MDRILKAARASGSLNLSNRSLSDVPSEVYRSLDAV------------------------- 35

Query: 266 XXXXXXXGENWWEAVELQKLILAHNNIETLKEDLRNLPQLTVLNVSHNKLSHLPAAIGEL 445
                   E WWEAVELQKLILAHNNI+ L E+LRNL  L VLNVSHNKLS LPAAIGEL
Sbjct: 36  -----QADEKWWEAVELQKLILAHNNIQLLSEELRNLSSLAVLNVSHNKLSELPAAIGEL 90

Query: 446 QMLKSLDVSFNLL 484
             LK LDVSFN L
Sbjct: 91  PALKLLDVSFNSL 103


Top