BLASTX nr result

ID: Bupleurum21_contig00018636 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00018636
         (1194 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263668.1| PREDICTED: polygalacturonase At1g48100-like ...   199   1e-48
ref|XP_002519290.1| Polygalacturonase precursor, putative [Ricin...   196   1e-47
ref|XP_002312305.1| predicted protein [Populus trichocarpa] gi|2...   194   4e-47
ref|XP_003546298.1| PREDICTED: polygalacturonase At1g48100-like ...   189   1e-45
ref|XP_003546297.1| PREDICTED: polygalacturonase At1g48100-like ...   189   1e-45

>ref|XP_002263668.1| PREDICTED: polygalacturonase At1g48100-like [Vitis vinifera]
          Length = 477

 Score =  199 bits (506), Expect = 1e-48
 Identities = 101/169 (59%), Positives = 114/169 (67%), Gaps = 4/169 (2%)
 Frame = -2

Query: 497 LCVVIVILLFLN-TSNVQGRYHYHKKQKPKEAXXXXXXXXXXXXXXXXXXXXXXXXXSHE 321
           L V IV+ +FL+ +SNV+GR H+HKK    +                             
Sbjct: 8   LVVWIVVSVFLHDSSNVEGRTHFHKKHNNDKGSPVADPPAYSPDPSPPPVYPPPVPSDPS 67

Query: 320 PN--DPGNSTSN-CIFDVVSFGAVGYGTTDDTEAFRNAWKAACAVESAVVLAPADYTFMI 150
           PN  DPGNS S  C+FDV SFGAVG GTTDDT AF  AWKAACAVES +VL PAD+ FMI
Sbjct: 68  PNPDDPGNSNSEPCVFDVTSFGAVGDGTTDDTAAFMEAWKAACAVESGIVLVPADHVFMI 127

Query: 149 TSSVFYGPCKPGLIFQVDGVLMPPNGPDCWPKKDSNKQWLVFYRLDDMT 3
           TS++F GPCKPGL+FQVDGVLMPPNGPDCWPK DS KQWLVFYRLD MT
Sbjct: 128 TSTIFSGPCKPGLVFQVDGVLMPPNGPDCWPKSDSKKQWLVFYRLDQMT 176


>ref|XP_002519290.1| Polygalacturonase precursor, putative [Ricinus communis]
           gi|223541605|gb|EEF43154.1| Polygalacturonase precursor,
           putative [Ricinus communis]
          Length = 479

 Score =  196 bits (498), Expect = 1e-47
 Identities = 98/168 (58%), Positives = 114/168 (67%), Gaps = 6/168 (3%)
 Frame = -2

Query: 488 VIVILLFLNTSNVQGRYHYHK-KQKPKE-----AXXXXXXXXXXXXXXXXXXXXXXXXXS 327
           + VI L  N+SNV+GRYHYHK K KP +                                
Sbjct: 12  IAVIFLLQNSSNVEGRYHYHKPKGKPSKHTGSPVSPTPDNAPAEPSVPSTPANSPLVPSD 71

Query: 326 HEPNDPGNSTSNCIFDVVSFGAVGYGTTDDTEAFRNAWKAACAVESAVVLAPADYTFMIT 147
             PNDPG STS+CIFDV S+GAVG G+TDDT AF  AWKAACAVES V+LAP+ Y+FMIT
Sbjct: 72  PYPNDPGKSTSDCIFDVTSYGAVGDGSTDDTAAFVAAWKAACAVESGVILAPSGYSFMIT 131

Query: 146 SSVFYGPCKPGLIFQVDGVLMPPNGPDCWPKKDSNKQWLVFYRLDDMT 3
           S++F GPC+PGL+FQVDG LMPP+GPD WP+KDS KQWLVFYRL DMT
Sbjct: 132 STIFSGPCQPGLVFQVDGCLMPPDGPDSWPEKDSKKQWLVFYRLTDMT 179


>ref|XP_002312305.1| predicted protein [Populus trichocarpa] gi|222852125|gb|EEE89672.1|
           predicted protein [Populus trichocarpa]
          Length = 482

 Score =  194 bits (493), Expect = 4e-47
 Identities = 92/173 (53%), Positives = 116/173 (67%), Gaps = 8/173 (4%)
 Frame = -2

Query: 497 LCVVIVILLFLNTSNVQGRYHYHKKQ--------KPKEAXXXXXXXXXXXXXXXXXXXXX 342
           +C+ + +LL+ N+SNV+GRYHYHK +         P                        
Sbjct: 10  ICIGVSLLLY-NSSNVEGRYHYHKPKNKSSNNIGSPVSPPPDDTPDPQNPIAPSSPSNPP 68

Query: 341 XXXXSHEPNDPGNSTSNCIFDVVSFGAVGYGTTDDTEAFRNAWKAACAVESAVVLAPADY 162
                  P DPGN++S CIF+V+ +GAVG G+TDDT+AFR AWK AC VES V+LAP+ +
Sbjct: 69  SIPSDPYPKDPGNTSSGCIFNVMDYGAVGDGSTDDTDAFRQAWKEACGVESGVILAPSGH 128

Query: 161 TFMITSSVFYGPCKPGLIFQVDGVLMPPNGPDCWPKKDSNKQWLVFYRLDDMT 3
           +FMITS++F GPCKPGL+FQVDG LMPP+GPDCWP+KDS KQWLVFYRLD MT
Sbjct: 129 SFMITSTIFTGPCKPGLVFQVDGYLMPPDGPDCWPEKDSTKQWLVFYRLDGMT 181


>ref|XP_003546298.1| PREDICTED: polygalacturonase At1g48100-like isoform 2 [Glycine max]
          Length = 483

 Score =  189 bits (480), Expect = 1e-45
 Identities = 96/176 (54%), Positives = 114/176 (64%), Gaps = 4/176 (2%)
 Frame = -2

Query: 518 MDFLHSNLCVVIVILLFL-NTSNVQGRYHYHKKQKPKEAXXXXXXXXXXXXXXXXXXXXX 342
           M  +H +L + I ++LF+ N  NV+GRYHYHK QK                         
Sbjct: 1   MSLIHWSLILWITMMLFIHNLDNVEGRYHYHKGQKKNSPAPNPPAESPTPPEDPPSPPSN 60

Query: 341 XXXXSHEP--NDP-GNSTSNCIFDVVSFGAVGYGTTDDTEAFRNAWKAACAVESAVVLAP 171
                 +P  NDP G+S S CIFDV SFGAVG G+ DDT+AF  AWK ACAVES VVL P
Sbjct: 61  SPSVPSDPYPNDPPGDSPSGCIFDVRSFGAVGDGSADDTDAFVAAWKEACAVESGVVLVP 120

Query: 170 ADYTFMITSSVFYGPCKPGLIFQVDGVLMPPNGPDCWPKKDSNKQWLVFYRLDDMT 3
            DY F ITS++F GPCKPGL+FQVDG LM P+GP+CWPK+DS+ QWLVFYRLD MT
Sbjct: 121 EDYCFKITSTIFTGPCKPGLVFQVDGTLMAPDGPECWPKEDSHSQWLVFYRLDQMT 176


>ref|XP_003546297.1| PREDICTED: polygalacturonase At1g48100-like isoform 1 [Glycine max]
          Length = 479

 Score =  189 bits (480), Expect = 1e-45
 Identities = 96/176 (54%), Positives = 114/176 (64%), Gaps = 4/176 (2%)
 Frame = -2

Query: 518 MDFLHSNLCVVIVILLFL-NTSNVQGRYHYHKKQKPKEAXXXXXXXXXXXXXXXXXXXXX 342
           M  +H +L + I ++LF+ N  NV+GRYHYHK QK                         
Sbjct: 1   MSLIHWSLILWITMMLFIHNLDNVEGRYHYHKGQKKNSPAPNPPAESPTPPEDPPSPPSN 60

Query: 341 XXXXSHEP--NDP-GNSTSNCIFDVVSFGAVGYGTTDDTEAFRNAWKAACAVESAVVLAP 171
                 +P  NDP G+S S CIFDV SFGAVG G+ DDT+AF  AWK ACAVES VVL P
Sbjct: 61  SPSVPSDPYPNDPPGDSPSGCIFDVRSFGAVGDGSADDTDAFVAAWKEACAVESGVVLVP 120

Query: 170 ADYTFMITSSVFYGPCKPGLIFQVDGVLMPPNGPDCWPKKDSNKQWLVFYRLDDMT 3
            DY F ITS++F GPCKPGL+FQVDG LM P+GP+CWPK+DS+ QWLVFYRLD MT
Sbjct: 121 EDYCFKITSTIFTGPCKPGLVFQVDGTLMAPDGPECWPKEDSHSQWLVFYRLDQMT 176


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