BLASTX nr result

ID: Bupleurum21_contig00018620 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00018620
         (268 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001234471.1| transcription factor IIIA [Solanum lycopersi...   149   2e-34
emb|CBI32873.3| unnamed protein product [Vitis vinifera]              142   2e-32
ref|XP_002278827.1| PREDICTED: zinc finger and SCAN domain-conta...   142   2e-32
ref|XP_002533583.1| zinc finger protein, putative [Ricinus commu...   139   2e-31
gb|AAG51140.1|AC069273_11 C2H2-type zinc finger protein, putativ...   137   9e-31

>ref|NP_001234471.1| transcription factor IIIA [Solanum lycopersicum]
           gi|115279797|gb|ABI85391.1| transcription factor IIIA
           [Solanum lycopersicum] gi|115279800|gb|ABI85393.1|
           transcription factor IIIA [Solanum lycopersicum]
          Length = 372

 Score =  149 bits (376), Expect = 2e-34
 Identities = 64/88 (72%), Positives = 75/88 (85%)
 Frame = +1

Query: 1   HEDSHVKLESTEAFCSDPGCMKYFANEQCLKAHIQSCHRHITCEICGAKQLKKNLKRHLL 180
           HEDSHVKLE+ EA C +PGCMK+F NE+CLK HI+SCH+HI CEICG KQLKKN+KRHL 
Sbjct: 179 HEDSHVKLETVEAMCLEPGCMKHFTNEKCLKEHIESCHQHIDCEICGTKQLKKNIKRHLR 238

Query: 181 THEVKPPSERIKCSYEDCPHTFSTKSNL 264
           THE  P SERIKC ++DC HTFS++SNL
Sbjct: 239 THEEGPISERIKCEFQDCLHTFSSRSNL 266


>emb|CBI32873.3| unnamed protein product [Vitis vinifera]
          Length = 390

 Score =  142 bits (359), Expect = 2e-32
 Identities = 62/88 (70%), Positives = 72/88 (81%)
 Frame = +1

Query: 1   HEDSHVKLESTEAFCSDPGCMKYFANEQCLKAHIQSCHRHITCEICGAKQLKKNLKRHLL 180
           HEDSH KL+S EA C +P C+K+F NEQCLKAH+QSCH+HI CEICG KQLKKN+KRHL 
Sbjct: 198 HEDSHAKLDSVEAVCLEPECLKHFTNEQCLKAHLQSCHQHIICEICGTKQLKKNIKRHLR 257

Query: 181 THEVKPPSERIKCSYEDCPHTFSTKSNL 264
           THE    SER+KC ++ C HTFSTKSNL
Sbjct: 258 THESVCSSERVKCHFKGCLHTFSTKSNL 285


>ref|XP_002278827.1| PREDICTED: zinc finger and SCAN domain-containing protein 10-like
           [Vitis vinifera]
          Length = 370

 Score =  142 bits (359), Expect = 2e-32
 Identities = 62/88 (70%), Positives = 72/88 (81%)
 Frame = +1

Query: 1   HEDSHVKLESTEAFCSDPGCMKYFANEQCLKAHIQSCHRHITCEICGAKQLKKNLKRHLL 180
           HEDSH KL+S EA C +P C+K+F NEQCLKAH+QSCH+HI CEICG KQLKKN+KRHL 
Sbjct: 178 HEDSHAKLDSVEAVCLEPECLKHFTNEQCLKAHLQSCHQHIICEICGTKQLKKNIKRHLR 237

Query: 181 THEVKPPSERIKCSYEDCPHTFSTKSNL 264
           THE    SER+KC ++ C HTFSTKSNL
Sbjct: 238 THESVCSSERVKCHFKGCLHTFSTKSNL 265


>ref|XP_002533583.1| zinc finger protein, putative [Ricinus communis]
           gi|223526542|gb|EEF28801.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 367

 Score =  139 bits (350), Expect = 2e-31
 Identities = 63/89 (70%), Positives = 73/89 (82%), Gaps = 1/89 (1%)
 Frame = +1

Query: 1   HEDSHVKLESTEAFCSDPGCMKYFANEQCLKAHIQSCHRHITCEICGAKQLKKNLKRHLL 180
           HEDSHVKL++ EA C + GCMK+F+N QCL+AHIQSCHR+ TCEICG KQLKKNLKRHL 
Sbjct: 180 HEDSHVKLDAVEAICLESGCMKHFSNSQCLRAHIQSCHRYTTCEICGTKQLKKNLKRHLR 239

Query: 181 THEVKPPS-ERIKCSYEDCPHTFSTKSNL 264
           THE    S ERIKC ++DC HTFS K+NL
Sbjct: 240 THESGGSSVERIKCQFKDCCHTFSNKTNL 268


>gb|AAG51140.1|AC069273_11 C2H2-type zinc finger protein, putative [Arabidopsis thaliana]
          Length = 413

 Score =  137 bits (345), Expect = 9e-31
 Identities = 59/89 (66%), Positives = 70/89 (78%)
 Frame = +1

Query: 1   HEDSHVKLESTEAFCSDPGCMKYFANEQCLKAHIQSCHRHITCEICGAKQLKKNLKRHLL 180
           H+DSHVKL+S EAFCS+PGCMKYF NE+CLK+HI+SCH+HI CEICG+K LKKN+KRHL 
Sbjct: 257 HQDSHVKLDSVEAFCSEPGCMKYFTNEECLKSHIRSCHQHINCEICGSKHLKKNIKRHLR 316

Query: 181 THEVKPPSERIKCSYEDCPHTFSTKSNLR 267
           TH+       IKC  E C  TFS  SNL+
Sbjct: 317 THDEDSSPGEIKCEVEGCSSTFSKASNLQ 345


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