BLASTX nr result

ID: Bupleurum21_contig00018606 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00018606
         (585 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004151116.1| PREDICTED: transcription factor RADIALIS-lik...   110   2e-22
ref|XP_004151125.1| PREDICTED: transcription factor RADIALIS-lik...   110   2e-22
ref|XP_003521116.1| PREDICTED: uncharacterized protein LOC100818...   109   3e-22
ref|XP_002868895.1| DNA binding protein [Arabidopsis lyrata subs...   109   3e-22
ref|XP_002313794.1| predicted protein [Populus trichocarpa] gi|2...   109   3e-22

>ref|XP_004151116.1| PREDICTED: transcription factor RADIALIS-like [Cucumis sativus]
           gi|449526073|ref|XP_004170039.1| PREDICTED:
           transcription factor RADIALIS-like [Cucumis sativus]
          Length = 79

 Score =  110 bits (275), Expect = 2e-22
 Identities = 51/67 (76%), Positives = 61/67 (91%), Gaps = 2/67 (2%)
 Frame = -3

Query: 433 MASMSSHGS--WTAKQNKAFEKALALYDKDTPDRWYNVAKAVGGKTAEEVKRHYEILVAD 260
           MAS+S+HGS  WTAKQNKAFE+ALA+YDKDTPDRW NVAKA+GGKT EEVKRHY++L+ D
Sbjct: 1   MASLSAHGSGVWTAKQNKAFEEALAMYDKDTPDRWLNVAKAIGGKTEEEVKRHYQLLLED 60

Query: 259 VRRIENG 239
           V+ IE+G
Sbjct: 61  VKHIESG 67


>ref|XP_004151125.1| PREDICTED: transcription factor RADIALIS-like, partial [Cucumis
           sativus] gi|449519314|ref|XP_004166680.1| PREDICTED:
           transcription factor RADIALIS-like, partial [Cucumis
           sativus]
          Length = 81

 Score =  110 bits (274), Expect = 2e-22
 Identities = 57/78 (73%), Positives = 63/78 (80%), Gaps = 6/78 (7%)
 Frame = -3

Query: 433 MASMSSHGS--WTAKQNKAFEKALALYDKDTPDRWYNVAKAVGGKTAEEVKRHYEILVAD 260
           MASMSSHGS  WT  QNKAFEKALA+YD+DTPDRW NVAKAVGGKTAEEVKRHY +LV D
Sbjct: 1   MASMSSHGSGTWTVTQNKAFEKALAVYDQDTPDRWLNVAKAVGGKTAEEVKRHYALLVED 60

Query: 259 VRRIENGN----YRPATG 218
           V+ IE+G     YR + G
Sbjct: 61  VKFIESGQVPFPYRTSGG 78


>ref|XP_003521116.1| PREDICTED: uncharacterized protein LOC100818368 [Glycine max]
          Length = 97

 Score =  109 bits (273), Expect = 3e-22
 Identities = 54/87 (62%), Positives = 65/87 (74%), Gaps = 5/87 (5%)
 Frame = -3

Query: 430 ASMSSHGSWTAKQNKAFEKALALYDKDTPDRWYNVAKAVGGKTAEEVKRHYEILVADVRR 251
           +S+S+ GSW+ K NKAFEKALA+YDKDTPDRWYNVA AVGGKT EEVKRHYE+LV DV+ 
Sbjct: 4   SSISASGSWSVKDNKAFEKALAVYDKDTPDRWYNVAHAVGGKTPEEVKRHYELLVQDVKH 63

Query: 250 IENG-----NYRPATG*YTQDFSEALQ 185
           IE+G     NY+  T   T    + L+
Sbjct: 64  IESGRVPFPNYKKTTSGSTDQEEKRLR 90


>ref|XP_002868895.1| DNA binding protein [Arabidopsis lyrata subsp. lyrata]
           gi|297314731|gb|EFH45154.1| DNA binding protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 100

 Score =  109 bits (273), Expect = 3e-22
 Identities = 55/78 (70%), Positives = 62/78 (79%), Gaps = 7/78 (8%)
 Frame = -3

Query: 430 ASMSSH--GSWTAKQNKAFEKALALYDKDTPDRWYNVAKAVGGKTAEEVKRHYEILVADV 257
           +SMSSH  GSWTAKQNKAFE+ALA YD+DTP+RW NVAK VGGKT EEVKRHYE+LV D+
Sbjct: 4   SSMSSHSSGSWTAKQNKAFEQALATYDQDTPNRWQNVAKVVGGKTTEEVKRHYELLVQDI 63

Query: 256 RRIENG-----NYRPATG 218
             IENG     NYR + G
Sbjct: 64  NNIENGHVPFPNYRTSGG 81


>ref|XP_002313794.1| predicted protein [Populus trichocarpa] gi|222850202|gb|EEE87749.1|
           predicted protein [Populus trichocarpa]
          Length = 87

 Score =  109 bits (273), Expect = 3e-22
 Identities = 54/74 (72%), Positives = 63/74 (85%), Gaps = 7/74 (9%)
 Frame = -3

Query: 430 ASMSSHGS--WTAKQNKAFEKALALYDKDTPDRWYNVAKAVGGKTAEEVKRHYEILVADV 257
           +SMSS GS  WT +QNKAFE+ALA+YD+DTPDRWYNVA+AVGGKTAEEVKRHYE+LV DV
Sbjct: 4   SSMSSRGSGSWTVQQNKAFERALAVYDRDTPDRWYNVARAVGGKTAEEVKRHYELLVEDV 63

Query: 256 RRIENG-----NYR 230
           + IE+G     NYR
Sbjct: 64  KHIESGHVPFPNYR 77


Top