BLASTX nr result

ID: Bupleurum21_contig00018593 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00018593
         (1147 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003532534.1| PREDICTED: eukaryotic peptide chain release ...    69   2e-09
ref|XP_003525203.1| PREDICTED: eukaryotic peptide chain release ...    69   2e-09
ref|XP_002329194.1| predicted protein [Populus trichocarpa] gi|2...    68   5e-09
ref|XP_002319868.1| predicted protein [Populus trichocarpa] gi|2...    68   5e-09
ref|XP_003631062.1| Eukaryotic peptide chain release factor GTP-...    67   6e-09

>ref|XP_003532534.1| PREDICTED: eukaryotic peptide chain release factor GTP-binding
           subunit ERF3A-like [Glycine max]
          Length = 570

 Score = 68.9 bits (167), Expect = 2e-09
 Identities = 49/156 (31%), Positives = 81/156 (51%), Gaps = 19/156 (12%)
 Frame = +2

Query: 11  VEFTGVKYSTKTSTYEFVEAPSHHSYVHNMMSRALQAHIGVLFVSV-AGDDIPKTLKDIQ 187
           VE     + T+T+ +  ++AP H SYV NM+S A QA IGVL +S   G+      +  Q
Sbjct: 212 VEVGRAHFETETTRFTILDAPGHKSYVPNMISGASQADIGVLVISARKGEFETGYERGGQ 271

Query: 188 LKDCAEMVMALGITKFLLVITKMDE----YKPKRCLLMKNRIVSLLKELGGHVS------ 337
            ++  ++   LG++K L+V+ KMDE    +  +R   +++++V  LK+ G +V       
Sbjct: 272 TREHVQLAKTLGVSKLLVVVNKMDEPTVQWSKERYDEIESKMVPFLKQSGYNVKKDVLFL 331

Query: 338 -FEAEENINSQRRGE-------SDPCFFDALDAIEL 421
                   N + R +       + PC F+ALDAIE+
Sbjct: 332 PISGLMGANMKTRVDKSVCPWWNGPCLFEALDAIEV 367


>ref|XP_003525203.1| PREDICTED: eukaryotic peptide chain release factor GTP-binding
           subunit ERF3A-like [Glycine max]
          Length = 504

 Score = 68.9 bits (167), Expect = 2e-09
 Identities = 49/156 (31%), Positives = 81/156 (51%), Gaps = 19/156 (12%)
 Frame = +2

Query: 11  VEFTGVKYSTKTSTYEFVEAPSHHSYVHNMMSRALQAHIGVLFVSV-AGDDIPKTLKDIQ 187
           VE     + T+T+ +  ++AP H SYV NM+S A QA IGVL +S   G+      +  Q
Sbjct: 146 VEVGRAHFETETTRFTILDAPGHKSYVPNMISGASQADIGVLVISARKGEFETGYERGGQ 205

Query: 188 LKDCAEMVMALGITKFLLVITKMDE----YKPKRCLLMKNRIVSLLKELGGHVS------ 337
            ++  ++   LG++K L+V+ KMDE    +  +R   +++++V  LK+ G +V       
Sbjct: 206 TREHVQLAKTLGVSKLLVVVNKMDEPTVQWSKERYDEIESKMVPFLKQSGYNVKKDVLFL 265

Query: 338 -FEAEENINSQRRGE-------SDPCFFDALDAIEL 421
                   N + R +       + PC F+ALDAIE+
Sbjct: 266 PISGLMGANMKTRVDKSVCPWWNGPCLFEALDAIEV 301


>ref|XP_002329194.1| predicted protein [Populus trichocarpa] gi|222870975|gb|EEF08106.1|
           predicted protein [Populus trichocarpa]
          Length = 524

 Score = 67.8 bits (164), Expect = 5e-09
 Identities = 47/156 (30%), Positives = 82/156 (52%), Gaps = 19/156 (12%)
 Frame = +2

Query: 11  VEFTGVKYSTKTSTYEFVEAPSHHSYVHNMMSRALQAHIGVLFVSV-AGDDIPKTLKDIQ 187
           VE     + T+T+ +  ++AP H SYV NM+S A QA IGVL +S   G+      +  Q
Sbjct: 160 VEVGRAHFETETTRFTILDAPGHKSYVPNMISGASQADIGVLVISARKGEFETGYERGGQ 219

Query: 188 LKDCAEMVMALGITKFLLVITKMDE----YKPKRCLLMKNRIVSLLKELGGHVSFEAE-- 349
            ++  ++   LG++K L+V+ KMDE    +  +R   ++++++  LK  G +V  + +  
Sbjct: 220 TREHVQLAKTLGVSKLLVVVNKMDEPTVNWSKERYDEIESKMIPFLKSSGYNVKKDVQFL 279

Query: 350 -----ENINSQRRGE-------SDPCFFDALDAIEL 421
                   N + R +       + PC F+ALD+IE+
Sbjct: 280 PISGLMGTNMKTRLDKAVCPWWNGPCLFEALDSIEV 315


>ref|XP_002319868.1| predicted protein [Populus trichocarpa] gi|222858244|gb|EEE95791.1|
           predicted protein [Populus trichocarpa]
          Length = 434

 Score = 67.8 bits (164), Expect = 5e-09
 Identities = 50/157 (31%), Positives = 84/157 (53%), Gaps = 20/157 (12%)
 Frame = +2

Query: 11  VEFTGVKYSTKTSTYEFVEAPSHHSYVHNMMSRALQAHIGVLFVSV-AGDDIPKTLKDIQ 187
           VE     + T+TS +  ++AP H SYV NM+S A QA IGVL +S   G+      +  Q
Sbjct: 76  VEVGRAYFETETSRFTILDAPGHKSYVPNMISGASQADIGVLVISARKGEFETGYERGGQ 135

Query: 188 LKDCAEMVMALGITKFLLVITKMDE----YKPKRCLLMKNRIVSLLKELGGHVSFEAE-- 349
            ++  ++   LG++K L+V+ KMD+    +  +R   +++++V  LK  G +V  + +  
Sbjct: 136 TREHVQLAKTLGVSKLLVVVNKMDDPTVNWSKERYDEIESKMVPFLKLSGYNVKKDVQFL 195

Query: 350 -------ENINSQRRGE------SDPCFFDALDAIEL 421
                   N+ + R G+      + PC F+ALDAIE+
Sbjct: 196 PISGLLGTNMKT-RMGKAICPWWNGPCLFEALDAIEV 231


>ref|XP_003631062.1| Eukaryotic peptide chain release factor GTP-binding subunit
           [Medicago truncatula] gi|355525084|gb|AET05538.1|
           Eukaryotic peptide chain release factor GTP-binding
           subunit [Medicago truncatula]
          Length = 497

 Score = 67.4 bits (163), Expect = 6e-09
 Identities = 47/159 (29%), Positives = 82/159 (51%), Gaps = 22/159 (13%)
 Frame = +2

Query: 11  VEFTGVKYSTKTSTYEFVEAPSHHSYVHNMMSRALQAHIGVLFVSV-AGDDIPKTLKDIQ 187
           VE     + T+T+ +  ++AP H SYV NM+S A QA IGVL +S   G+      +  Q
Sbjct: 139 VEVGRAHFETETTRFTILDAPGHKSYVPNMISGASQADIGVLVISARKGEFETGYERGGQ 198

Query: 188 LKDCAEMVMALGITKFLLVITKMDE----YKPKRCLLMKNRIVSLLKE------------ 319
            ++  ++   LG+TK L+V+ KMD+    +  +R   ++++++  LK+            
Sbjct: 199 TREHVQLAKTLGVTKLLVVVNKMDDPTVNWSKERYDEIESKMIPFLKQSGYNVKKDVLFL 258

Query: 320 -----LGGHVSFEAEENINSQRRGESDPCFFDALDAIEL 421
                +G ++    + +I S   G   PC F+ALD+IE+
Sbjct: 259 PISGLMGSNLKTRMDRSICSWWDG---PCLFEALDSIEV 294


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