BLASTX nr result

ID: Bupleurum21_contig00018566 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00018566
         (1562 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002514492.1| LRX2, putative [Ricinus communis] gi|2235463...    94   8e-17
dbj|BAF48663.1| leucine-rich repeat/extensin [Nicotiana plumbagi...    92   3e-16
ref|XP_002308141.1| predicted protein [Populus trichocarpa] gi|2...    92   4e-16
ref|XP_002331387.1| predicted protein [Populus trichocarpa] gi|2...    91   6e-16
ref|XP_002274545.2| PREDICTED: leucine-rich repeat extensin-like...    89   4e-15

>ref|XP_002514492.1| LRX2, putative [Ricinus communis] gi|223546391|gb|EEF47892.1| LRX2,
            putative [Ricinus communis]
          Length = 766

 Score = 94.4 bits (233), Expect = 8e-17
 Identities = 44/71 (61%), Positives = 54/71 (76%), Gaps = 1/71 (1%)
 Frame = -1

Query: 1562 PAAICQLPSLQNFTYSFNFFTGAAPVC-AVPGANVLIDGSQNCISGLINQRPPSECLSGA 1386
            PA+ICQLPSLQNFTYSFN+FTG AP C A+ G+ VL  G++NCI G ++QR   EC S  
Sbjct: 306  PASICQLPSLQNFTYSFNYFTGEAPSCAAIGGSRVLTKGTKNCIPGKMDQRSAKECSSEK 365

Query: 1385 AQPVDCSTLKC 1353
            A+PV+CS  KC
Sbjct: 366  ARPVNCSKFKC 376


>dbj|BAF48663.1| leucine-rich repeat/extensin [Nicotiana plumbaginifolia]
            gi|127058167|dbj|BAF48664.1| leucine-rich repeat/extensin
            [Nicotiana plumbaginifolia]
          Length = 725

 Score = 92.4 bits (228), Expect = 3e-16
 Identities = 41/73 (56%), Positives = 51/73 (69%)
 Frame = -1

Query: 1562 PAAICQLPSLQNFTYSFNFFTGAAPVCAVPGANVLIDGSQNCISGLINQRPPSECLSGAA 1383
            PA+ICQLP LQNFTYSFN+FTG APVCA   +  ++DG +NCI+G  +QR   EC S  A
Sbjct: 306  PASICQLPRLQNFTYSFNYFTGEAPVCAATRSGRIVDGEENCIAGKEDQRSAKECSSDDA 365

Query: 1382 QPVDCSTLKCSKR 1344
            +P DC   +C  R
Sbjct: 366  KPYDCRKSQCFSR 378


>ref|XP_002308141.1| predicted protein [Populus trichocarpa] gi|222854117|gb|EEE91664.1|
            predicted protein [Populus trichocarpa]
          Length = 525

 Score = 92.0 bits (227), Expect = 4e-16
 Identities = 42/70 (60%), Positives = 52/70 (74%)
 Frame = -1

Query: 1562 PAAICQLPSLQNFTYSFNFFTGAAPVCAVPGANVLIDGSQNCISGLINQRPPSECLSGAA 1383
            PA++CQLP+LQNFT+SFN+FTG AP CA  G   + +G+QNCI G  NQR   +C S AA
Sbjct: 305  PASVCQLPNLQNFTFSFNYFTGEAPSCAAIGG--VSNGTQNCIPGKTNQRSAKQCSSEAA 362

Query: 1382 QPVDCSTLKC 1353
            +PVDCS  KC
Sbjct: 363  RPVDCSKFKC 372


>ref|XP_002331387.1| predicted protein [Populus trichocarpa] gi|222873601|gb|EEF10732.1|
            predicted protein [Populus trichocarpa]
          Length = 481

 Score = 91.3 bits (225), Expect = 6e-16
 Identities = 42/70 (60%), Positives = 53/70 (75%)
 Frame = -1

Query: 1562 PAAICQLPSLQNFTYSFNFFTGAAPVCAVPGANVLIDGSQNCISGLINQRPPSECLSGAA 1383
            PA++ QLP+LQNFTYSFN+FTG AP CA  GA  + +G+QNCI G +NQR   +C S AA
Sbjct: 304  PASVYQLPNLQNFTYSFNYFTGEAPSCAAIGA--VSNGTQNCIPGKMNQRSAKQCSSEAA 361

Query: 1382 QPVDCSTLKC 1353
            +P+DCS  KC
Sbjct: 362  RPIDCSKFKC 371


>ref|XP_002274545.2| PREDICTED: leucine-rich repeat extensin-like protein 2-like [Vitis
            vinifera]
          Length = 610

 Score = 88.6 bits (218), Expect = 4e-15
 Identities = 43/70 (61%), Positives = 49/70 (70%)
 Frame = -1

Query: 1562 PAAICQLPSLQNFTYSFNFFTGAAPVCAVPGANVLIDGSQNCISGLINQRPPSECLSGAA 1383
            P +ICQLP L+NFTYSFN+FTG APVCA     +  DG QNCI G  +QR  S C S AA
Sbjct: 300  PPSICQLPRLENFTYSFNYFTGEAPVCAA----ITGDGRQNCIPGKTDQRSSSMCSSQAA 355

Query: 1382 QPVDCSTLKC 1353
            +PVDCS  KC
Sbjct: 356  RPVDCSKSKC 365


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