BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00018562
         (537 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAF50334.1| hypothetical protein [Crucihimalaya wallichii] g...   125   5e-38
dbj|BAF50245.1| hypothetical protein [Capsella bursa-pastoris] g...   125   2e-37
ref|YP_003540978.1| hypothetical chloroplast RF68 [Phoenix dacty...   109   2e-33
ref|YP_358635.1| ORF170 [Phalaenopsis aphrodite subsp. formosana...   144   6e-33
ref|YP_007026598.1| Ycf68 [Festuca ovina] gi|426406704|ref|YP_00...    91   6e-30

>dbj|BAF50334.1| hypothetical protein [Crucihimalaya wallichii]
           gi|134286725|dbj|BAF50348.1| hypothetical protein
           [Crucihimalaya wallichii] gi|134286888|dbj|BAF50509.1|
           hypothetical protein [Lepidium virginicum]
           gi|134286902|dbj|BAF50523.1| hypothetical protein
           [Lepidium virginicum] gi|134286977|dbj|BAF50597.1|
           hypothetical protein [Lobularia maritima]
           gi|134286991|dbj|BAF50611.1| hypothetical protein
           [Lobularia maritima]
          Length = 111

 Score =  125 bits (315), Expect(2) = 5e-38
 Identities = 62/66 (93%), Positives = 62/66 (93%)
 Frame = +2

Query: 218 SPLSFWGDGGIVPFEPFFFHAFPGGLEKAAINRISLILPYRKEEREILFAFRRDQEIGSS 397
           SPLSFWGDGGIVPFEPFF HAFPGGLEKAAINRI LILP RKEEREILF FRRDQEIGSS
Sbjct: 16  SPLSFWGDGGIVPFEPFF-HAFPGGLEKAAINRIFLILPSRKEEREILFPFRRDQEIGSS 74

Query: 398 RKKNAW 415
           RKKNAW
Sbjct: 75  RKKNAW 80



 Score = 57.4 bits (137), Expect(2) = 5e-38
 Identities = 28/30 (93%), Positives = 28/30 (93%)
 Frame = +3

Query: 417 INNSLLGLRPPQSLRTPPIGAMGCVYLSIS 506
           INNSLLGLRPPQSLRTPPI AMG VYLSIS
Sbjct: 82  INNSLLGLRPPQSLRTPPISAMGRVYLSIS 111


>dbj|BAF50245.1| hypothetical protein [Capsella bursa-pastoris]
           gi|134286635|dbj|BAF50259.1| hypothetical protein
           [Capsella bursa-pastoris]
          Length = 111

 Score =  125 bits (315), Expect(2) = 2e-37
 Identities = 62/66 (93%), Positives = 62/66 (93%)
 Frame = +2

Query: 218 SPLSFWGDGGIVPFEPFFFHAFPGGLEKAAINRISLILPYRKEEREILFAFRRDQEIGSS 397
           SPLSFWGDGGIVPFEPFF HAFPGGLEKAAINRI LILP RKEEREILF FRRDQEIGSS
Sbjct: 16  SPLSFWGDGGIVPFEPFF-HAFPGGLEKAAINRIFLILPSRKEEREILFPFRRDQEIGSS 74

Query: 398 RKKNAW 415
           RKKNAW
Sbjct: 75  RKKNAW 80



 Score = 55.1 bits (131), Expect(2) = 2e-37
 Identities = 27/30 (90%), Positives = 27/30 (90%)
 Frame = +3

Query: 417 INNSLLGLRPPQSLRTPPIGAMGCVYLSIS 506
           INNSLLGLRPPQSLRTPPI A G VYLSIS
Sbjct: 82  INNSLLGLRPPQSLRTPPISAKGRVYLSIS 111


>ref|YP_003540978.1| hypothetical chloroplast RF68 [Phoenix dactylifera]
           gi|292559577|ref|YP_003540992.1| hypothetical
           chloroplast RF68 [Phoenix dactylifera]
           gi|377819425|ref|YP_005097920.1| hypothetical protein
           ycf68 (chloroplast) [Colocasia esculenta]
           gi|377819438|ref|YP_005097933.1| hypothetical protein
           ycf68 (chloroplast) [Colocasia esculenta]
           gi|294620624|gb|ADF28193.1| hypothetical chloroplast
           RF68 (chloroplast) [Phoenix dactylifera]
           gi|294620638|gb|ADF28207.1| hypothetical chloroplast
           RF68 (chloroplast) [Phoenix dactylifera]
           gi|340536686|gb|AEK48453.1| hypothetical protein ycf68
           (chloroplast) [Colocasia esculenta]
           gi|340536699|gb|AEK48466.1| hypothetical protein ycf68
           (chloroplast) [Colocasia esculenta]
           gi|340536773|gb|AEK48539.1| hypothetical protein ycf68
           (chloroplast) [Colocasia esculenta]
           gi|340536786|gb|AEK48552.1| hypothetical protein ycf68
           (chloroplast) [Colocasia esculenta]
          Length = 114

 Score =  109 bits (272), Expect(3) = 2e-33
 Identities = 53/60 (88%), Positives = 56/60 (93%)
 Frame = +3

Query: 3   SGEIQCRSNFRFTRGIRAVRGGPPWLLSSRESIHPLSVYGQLSLEHRFRFGLNGKIKWST 182
           +GEIQCRSNF FTRGIRAVRGGPP LLSSRESIHPLSVYGQLSLEHRFRFGLNGK++  T
Sbjct: 14  NGEIQCRSNFLFTRGIRAVRGGPPRLLSSRESIHPLSVYGQLSLEHRFRFGLNGKMEHLT 73



 Score = 45.8 bits (107), Expect(3) = 2e-33
 Identities = 21/34 (61%), Positives = 21/34 (61%)
 Frame = +2

Query: 170 KMEXXXXXXXXXXXXXSPLSFWGDGGIVPFEPFF 271
           KME             SPLSFWGDGGIVPFEPFF
Sbjct: 68  KMEHLTTHLHRPRTTRSPLSFWGDGGIVPFEPFF 101



 Score = 33.1 bits (74), Expect(3) = 2e-33
 Identities = 14/15 (93%), Positives = 14/15 (93%)
 Frame = +1

Query: 268 FFSCFSRRSGESCNQ 312
           FFSCFSRRSGES NQ
Sbjct: 100 FFSCFSRRSGESSNQ 114


>ref|YP_358635.1| ORF170 [Phalaenopsis aphrodite subsp. formosana]
           gi|58802851|gb|AAW82571.1| ORF170 [Phalaenopsis
           aphrodite subsp. formosana]
          Length = 170

 Score =  144 bits (364), Expect = 6e-33
 Identities = 93/170 (54%), Positives = 101/170 (59%), Gaps = 2/170 (1%)
 Frame = +2

Query: 17  M*IQLSIHSWDPGGPGGTTMAPLFSRIHTSLISVWTAISRAQV*VRPQWENKMEXXXXXX 196
           M I+LSIHSWDPGGPGG     L SR     +SV+  +S     +R     KME      
Sbjct: 1   MEIELSIHSWDPGGPGGPPRL-LSSRESIHPLSVYGQLSLEHR-LRFGLNEKMEHLTTHL 58

Query: 197 XXXXXXXSPLSFWGDGGIVPFEPFFFHAFPGGLEKAAINRISLILPYRKEEREILFAFRR 376
                  SPLSFWGD GI+PFEPFF HA  GGL+KAAINRI  ILP RKEEREILF FRR
Sbjct: 59  HRPRTTRSPLSFWGDRGIIPFEPFF-HA--GGLKKAAINRIFRILPSRKEEREILFPFRR 115

Query: 377 DQEIGSSRKKNAWYK*LTSWSS--TPSVTTNAPDRCNGMCLFIYLLTRNG 520
           DQEIGSS           S      P       D+CNGMCLFIYLLTRNG
Sbjct: 116 DQEIGSSHNIRRMLGINNSLLGFRPPQSLRALLDQCNGMCLFIYLLTRNG 165


>ref|YP_007026598.1| Ycf68 [Festuca ovina] gi|426406704|ref|YP_007026612.1| Ycf68
           [Festuca ovina] gi|427437039|ref|YP_007026512.1| Ycf68
           [Festuca altissima] gi|427437040|ref|YP_007026526.1|
           Ycf68 [Festuca altissima] gi|410177830|gb|AFV62711.1|
           Ycf68 [Festuca altissima] gi|410177831|gb|AFV62712.1|
           Ycf68 [Festuca altissima] gi|410177917|gb|AFV62797.1|
           Ycf68 [Festuca ovina] gi|410177918|gb|AFV62798.1| Ycf68
           [Festuca ovina]
          Length = 144

 Score = 90.9 bits (224), Expect(2) = 6e-30
 Identities = 47/65 (72%), Positives = 48/65 (73%)
 Frame = +2

Query: 170 KMEXXXXXXXXXXXXXSPLSFWGDGGIVPFEPFFFHAFPGGLEKAAINRISLILPYRKEE 349
           KME             SPLSFWGDGGIVPFEPFF HAFPGGLEKAAINR  LILPY +EE
Sbjct: 80  KMEHLTTHLHRPRTTRSPLSFWGDGGIVPFEPFF-HAFPGGLEKAAINRTFLILPYFQEE 138

Query: 350 REILF 364
           REILF
Sbjct: 139 REILF 143



 Score = 65.1 bits (157), Expect(2) = 6e-30
 Identities = 38/63 (60%), Positives = 42/63 (66%), Gaps = 4/63 (6%)
 Frame = +3

Query: 6   GEIQCRSNFRFTRGIRAVRG----GPPWLLSSRESIHPLSVYGQLSLEHRFRFGLNGKIK 173
           G IQ RS+   T       G    GPP LLSSRESIHPLSVYG+LSLEHR RF LNGK++
Sbjct: 23  GAIQVRSHVDLTFYSLVGSGRSGEGPPRLLSSRESIHPLSVYGELSLEHRLRFVLNGKME 82

Query: 174 WST 182
             T
Sbjct: 83  HLT 85