BLASTX nr result

ID: Bupleurum21_contig00018326 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00018326
         (498 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002525395.1| conserved hypothetical protein [Ricinus comm...   274   5e-72
ref|XP_002315689.1| predicted protein [Populus trichocarpa] gi|2...   274   5e-72
ref|XP_004155360.1| PREDICTED: LOW QUALITY PROTEIN: CRS2-associa...   267   8e-70
ref|XP_004135256.1| PREDICTED: LOW QUALITY PROTEIN: CRS2-associa...   267   8e-70
gb|ADN33825.1| RNA splicing factor [Cucumis melo subsp. melo]         266   2e-69

>ref|XP_002525395.1| conserved hypothetical protein [Ricinus communis]
           gi|223535358|gb|EEF37033.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 561

 Score =  274 bits (701), Expect = 5e-72
 Identities = 129/165 (78%), Positives = 145/165 (87%)
 Frame = -3

Query: 496 HTHWRRDPICKVRSLGVPTVDMNNVCQCLEEKTGGKIIFRIGGIAYLFRGRKYDPRNRPQ 317
           H+HWRR P+CKVR  G+PTVDMNN+C+ LEE+TGGKII+RIGG+ YLF GR YD R+R +
Sbjct: 227 HSHWRRSPVCKVRCKGIPTVDMNNICRHLEERTGGKIIYRIGGVVYLFCGRNYDYRSRVR 286

Query: 316 YPVMLWKPATPVYPKLIQEAPEGLTKAEADAFREKGKKLLPICKLAKNGVYNTLVRDVRC 137
           YPVMLWKPA PVYPKLIQ+APEGLTKAEAD FREKGK LLPICKLAKNGVY TLVRDVR 
Sbjct: 287 YPVMLWKPAAPVYPKLIQDAPEGLTKAEADEFREKGKNLLPICKLAKNGVYITLVRDVRN 346

Query: 136 AFEECAIVKINCTGMHASDYKKIGAKLKELVPCVLLSFDEEQILM 2
           AFE   +VKI+C GM+ SDYKK+GAKLKELVPCVLLSFD+E ILM
Sbjct: 347 AFEGSPLVKIDCKGMNPSDYKKLGAKLKELVPCVLLSFDDEHILM 391


>ref|XP_002315689.1| predicted protein [Populus trichocarpa] gi|222864729|gb|EEF01860.1|
           predicted protein [Populus trichocarpa]
          Length = 506

 Score =  274 bits (701), Expect = 5e-72
 Identities = 129/165 (78%), Positives = 145/165 (87%)
 Frame = -3

Query: 496 HTHWRRDPICKVRSLGVPTVDMNNVCQCLEEKTGGKIIFRIGGIAYLFRGRKYDPRNRPQ 317
           H+HW+R  +CKVR  GVPTVDM+NVC+ LEEKTGGKII R+GG+ YLFRGR Y+ R RPQ
Sbjct: 177 HSHWKRRRVCKVRCKGVPTVDMDNVCRHLEEKTGGKIIHRVGGVVYLFRGRNYNYRTRPQ 236

Query: 316 YPVMLWKPATPVYPKLIQEAPEGLTKAEADAFREKGKKLLPICKLAKNGVYNTLVRDVRC 137
           YPVMLWKPATPVYPKLIQEAPEGLTKA+AD FR+KGK LLPICKLAKNGVY TLVRDVR 
Sbjct: 237 YPVMLWKPATPVYPKLIQEAPEGLTKAQADEFRKKGKNLLPICKLAKNGVYITLVRDVRA 296

Query: 136 AFEECAIVKINCTGMHASDYKKIGAKLKELVPCVLLSFDEEQILM 2
           AFE   +VK++C GM  SDYKK+GAKLK+LVPCVLLSFD+EQILM
Sbjct: 297 AFEGSPLVKVDCKGMEPSDYKKLGAKLKDLVPCVLLSFDDEQILM 341


>ref|XP_004155360.1| PREDICTED: LOW QUALITY PROTEIN: CRS2-associated factor 2,
           chloroplastic-like [Cucumis sativus]
          Length = 603

 Score =  267 bits (682), Expect = 8e-70
 Identities = 126/165 (76%), Positives = 140/165 (84%)
 Frame = -3

Query: 496 HTHWRRDPICKVRSLGVPTVDMNNVCQCLEEKTGGKIIFRIGGIAYLFRGRKYDPRNRPQ 317
           H+HW+R  +CKVR  GVPTVDM+N+C  +EEKTGGKII R+GG+ YLFRGR Y+ R RPQ
Sbjct: 277 HSHWKRQRVCKVRCKGVPTVDMDNICHHIEEKTGGKIIHRVGGVLYLFRGRNYNYRTRPQ 336

Query: 316 YPVMLWKPATPVYPKLIQEAPEGLTKAEADAFREKGKKLLPICKLAKNGVYNTLVRDVRC 137
           YPVMLWKPA PVYPKLIQEAPEGLTK EA+  R KGK LLPICKLAKNGVY +LV DVR 
Sbjct: 337 YPVMLWKPAAPVYPKLIQEAPEGLTKKEANVLRMKGKNLLPICKLAKNGVYISLVNDVRH 396

Query: 136 AFEECAIVKINCTGMHASDYKKIGAKLKELVPCVLLSFDEEQILM 2
           AFE   +VKI+CTGMH SDYKK+GAKLKELVPCVLLSFD EQILM
Sbjct: 397 AFEGSILVKIDCTGMHESDYKKLGAKLKELVPCVLLSFDNEQILM 441


>ref|XP_004135256.1| PREDICTED: LOW QUALITY PROTEIN: CRS2-associated factor 2,
           chloroplastic-like [Cucumis sativus]
          Length = 602

 Score =  267 bits (682), Expect = 8e-70
 Identities = 126/165 (76%), Positives = 140/165 (84%)
 Frame = -3

Query: 496 HTHWRRDPICKVRSLGVPTVDMNNVCQCLEEKTGGKIIFRIGGIAYLFRGRKYDPRNRPQ 317
           H+HW+R  +CKVR  GVPTVDM+N+C  +EEKTGGKII R+GG+ YLFRGR Y+ R RPQ
Sbjct: 276 HSHWKRQRVCKVRCKGVPTVDMDNICHHIEEKTGGKIIHRVGGVLYLFRGRNYNYRTRPQ 335

Query: 316 YPVMLWKPATPVYPKLIQEAPEGLTKAEADAFREKGKKLLPICKLAKNGVYNTLVRDVRC 137
           YPVMLWKPA PVYPKLIQEAPEGLTK EA+  R KGK LLPICKLAKNGVY +LV DVR 
Sbjct: 336 YPVMLWKPAAPVYPKLIQEAPEGLTKKEANVLRMKGKNLLPICKLAKNGVYISLVNDVRH 395

Query: 136 AFEECAIVKINCTGMHASDYKKIGAKLKELVPCVLLSFDEEQILM 2
           AFE   +VKI+CTGMH SDYKK+GAKLKELVPCVLLSFD EQILM
Sbjct: 396 AFEGSILVKIDCTGMHESDYKKLGAKLKELVPCVLLSFDNEQILM 440


>gb|ADN33825.1| RNA splicing factor [Cucumis melo subsp. melo]
          Length = 603

 Score =  266 bits (679), Expect = 2e-69
 Identities = 126/165 (76%), Positives = 140/165 (84%)
 Frame = -3

Query: 496 HTHWRRDPICKVRSLGVPTVDMNNVCQCLEEKTGGKIIFRIGGIAYLFRGRKYDPRNRPQ 317
           H+HW+R  +CKVR  GVPTVDM+N+C  +EEKTGGKII R+GG+ YLFRGR Y+ R RPQ
Sbjct: 277 HSHWKRQRVCKVRCKGVPTVDMDNICHHIEEKTGGKIIHRVGGVLYLFRGRNYNYRTRPQ 336

Query: 316 YPVMLWKPATPVYPKLIQEAPEGLTKAEADAFREKGKKLLPICKLAKNGVYNTLVRDVRC 137
           YPVMLWKPA PVYPKLIQEAPEGLTK EA+  R KGK LLPICKLAKNGVY +LV DVR 
Sbjct: 337 YPVMLWKPAAPVYPKLIQEAPEGLTKEEANELRMKGKNLLPICKLAKNGVYISLVDDVRH 396

Query: 136 AFEECAIVKINCTGMHASDYKKIGAKLKELVPCVLLSFDEEQILM 2
           AFE   +VKI+CTGMH SDYKK+GAKLKELVPCVLLSFD EQILM
Sbjct: 397 AFEGSILVKIDCTGMHESDYKKLGAKLKELVPCVLLSFDNEQILM 441


Top