BLASTX nr result

ID: Bupleurum21_contig00018100 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00018100
         (675 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001236705.1| uncharacterized protein LOC100527229 [Glycin...   169   5e-40
ref|XP_002277373.1| PREDICTED: uncharacterized protein LOC100264...   168   8e-40
ref|XP_003534490.1| PREDICTED: DNA-directed RNA polymerase I sub...   166   4e-39
ref|XP_002510510.1| conserved hypothetical protein [Ricinus comm...   161   1e-37
ref|XP_004147835.1| PREDICTED: DNA-directed RNA polymerase I sub...   159   4e-37

>ref|NP_001236705.1| uncharacterized protein LOC100527229 [Glycine max]
           gi|255631830|gb|ACU16282.1| unknown [Glycine max]
          Length = 232

 Score =  169 bits (428), Expect = 5e-40
 Identities = 86/161 (53%), Positives = 119/161 (73%)
 Frame = +1

Query: 10  AKILPGIHPYFGVXXXXXXXXXXXXXDMMLEGKVVKLSQQAIHIIVLGFSSAVVVEEDIR 189
           AKIL G+HPYFGV             +M+LEGKVVK++Q++IH++VLGFSSA++ E+DIR
Sbjct: 58  AKILSGVHPYFGVKLKVNLLLFSPKPNMLLEGKVVKVTQESIHVVVLGFSSAIISEKDIR 117

Query: 190 EDFRYKIKRGKGLYVSKSQKKHKIKVGTIIRFKVKSFDEEILHIYGSLLPTNTGSVLWLH 369
           E+F  K KRG+ +YVS+S K+H IKVGT+IRF VKSFDEEILH+YGSL+P +TGS+ WL 
Sbjct: 118 EEFVCKTKRGQEVYVSRSHKRHVIKVGTMIRFLVKSFDEEILHVYGSLVPDHTGSIYWLD 177

Query: 370 TNSEDQSQADSNLKKQREDEGKDKIMELNKEGIDAKLVSIN 492
            N E  S +D + KK+R     ++IM L ++ +D +L ++N
Sbjct: 178 KNLEVDSHSDRSEKKRR--IVPERIM-LEQDAVDGELSTLN 215


>ref|XP_002277373.1| PREDICTED: uncharacterized protein LOC100264366 [Vitis vinifera]
           gi|302142630|emb|CBI19833.3| unnamed protein product
           [Vitis vinifera]
          Length = 233

 Score =  168 bits (426), Expect = 8e-40
 Identities = 85/161 (52%), Positives = 118/161 (73%)
 Frame = +1

Query: 10  AKILPGIHPYFGVXXXXXXXXXXXXXDMMLEGKVVKLSQQAIHIIVLGFSSAVVVEEDIR 189
           AKILPGIHPYFGV             +M++EGKVVKL+Q++IHI+VLGFSSA++ +E+IR
Sbjct: 58  AKILPGIHPYFGVRLKAKLLLFSPKPNMLIEGKVVKLAQESIHIVVLGFSSAIITDEEIR 117

Query: 190 EDFRYKIKRGKGLYVSKSQKKHKIKVGTIIRFKVKSFDEEILHIYGSLLPTNTGSVLWLH 369
            +F+YKIK G+ ++VS+S K+H IKVGT+IRF VKS DEEILHI GSL P +TGS+LWL 
Sbjct: 118 GEFKYKIKHGEAVFVSRSHKRHVIKVGTMIRFLVKSLDEEILHISGSLNPPHTGSILWLD 177

Query: 370 TNSEDQSQADSNLKKQREDEGKDKIMELNKEGIDAKLVSIN 492
              ED S +  + KK+RE+ G+ + M+   + +D  + S++
Sbjct: 178 KKLEDASPSSRSTKKRREN-GESREMQ-EHDTVDGGVFSLD 216


>ref|XP_003534490.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa43-like
           [Glycine max]
          Length = 232

 Score =  166 bits (420), Expect = 4e-39
 Identities = 84/161 (52%), Positives = 117/161 (72%)
 Frame = +1

Query: 10  AKILPGIHPYFGVXXXXXXXXXXXXXDMMLEGKVVKLSQQAIHIIVLGFSSAVVVEEDIR 189
           AKILPG+HPYFGV             +M+LEGKVVK++Q++IH++VLGFSSA++ E+DIR
Sbjct: 58  AKILPGVHPYFGVKLKVNLLLFSPKPNMLLEGKVVKVTQESIHVVVLGFSSAIITEKDIR 117

Query: 190 EDFRYKIKRGKGLYVSKSQKKHKIKVGTIIRFKVKSFDEEILHIYGSLLPTNTGSVLWLH 369
           E+F  K KRG+ +Y S+S K+H IKVGT+IRF VKSFDEEILH+YGSL+P +TGS+ WL 
Sbjct: 118 EEFVCKTKRGQEVYASRSHKQHVIKVGTMIRFLVKSFDEEILHVYGSLVPDHTGSIYWLD 177

Query: 370 TNSEDQSQADSNLKKQREDEGKDKIMELNKEGIDAKLVSIN 492
            N E  S    + KK+R     ++IM L ++ +D +L +++
Sbjct: 178 KNLEADSHVYRSKKKRR--IVPERIM-LEQDAVDGELSTLD 215


>ref|XP_002510510.1| conserved hypothetical protein [Ricinus communis]
           gi|223551211|gb|EEF52697.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 229

 Score =  161 bits (407), Expect = 1e-37
 Identities = 83/163 (50%), Positives = 115/163 (70%)
 Frame = +1

Query: 10  AKILPGIHPYFGVXXXXXXXXXXXXXDMMLEGKVVKLSQQAIHIIVLGFSSAVVVEEDIR 189
           A+IL G+HPYFGV             DM+LEGKVVK+++++IH+IVLGFSSA++ +EDIR
Sbjct: 58  ARILCGVHPYFGVRLQATMLVFSPKPDMLLEGKVVKVTRESIHVIVLGFSSAIITDEDIR 117

Query: 190 EDFRYKIKRGKGLYVSKSQKKHKIKVGTIIRFKVKSFDEEILHIYGSLLPTNTGSVLWLH 369
           ++FRYK K G+ LYVS+  K+H IKVGT+IRF VKS DEE LHI GSL+PT+TGS+ WL 
Sbjct: 118 DEFRYKRKHGEALYVSRPHKQHVIKVGTMIRFVVKSLDEETLHISGSLVPTHTGSISWLE 177

Query: 370 TNSEDQSQADSNLKKQREDEGKDKIMELNKEGIDAKLVSINTD 498
            + ++ +  DS  KK+ + +G+ ++ E    G D    S+N D
Sbjct: 178 GDMKN-TTTDSGNKKRTQLDGEIEVQEEGTAGGDT--YSVNGD 217


>ref|XP_004147835.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa43-like
           [Cucumis sativus] gi|449476884|ref|XP_004154864.1|
           PREDICTED: DNA-directed RNA polymerase I subunit
           rpa43-like [Cucumis sativus]
          Length = 231

 Score =  159 bits (403), Expect = 4e-37
 Identities = 84/165 (50%), Positives = 113/165 (68%)
 Frame = +1

Query: 10  AKILPGIHPYFGVXXXXXXXXXXXXXDMMLEGKVVKLSQQAIHIIVLGFSSAVVVEEDIR 189
           AKIL G+HPYFGV             +M+LEGKVVKL Q++IH+IVLGF+SAV+  EDIR
Sbjct: 58  AKILSGVHPYFGVTIKAKLLLFSPKPNMLLEGKVVKLRQESIHVIVLGFASAVITYEDIR 117

Query: 190 EDFRYKIKRGKGLYVSKSQKKHKIKVGTIIRFKVKSFDEEILHIYGSLLPTNTGSVLWLH 369
           ++F+++ K G+ ++VS++ K H IKVGT+IR  VKSFDEEILHI GSL+P++TGS+ WL 
Sbjct: 118 DEFKHRTKHGEEMFVSRAHKHHIIKVGTMIRLLVKSFDEEILHISGSLVPSHTGSIHWLE 177

Query: 370 TNSEDQSQADSNLKKQREDEGKDKIMELNKEGIDAKLVSINTDGQ 504
            NS + S   S  +K RE+EG   + +    G D   V +N D Q
Sbjct: 178 KNSVEGSVTMSK-RKMRENEGGVTLQD--SVGTDVNAVILNNDHQ 219


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