BLASTX nr result

ID: Bupleurum21_contig00017990 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00017990
         (970 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002530166.1| conserved hypothetical protein [Ricinus comm...   140   5e-31
ref|XP_002323401.1| predicted protein [Populus trichocarpa] gi|2...   132   1e-28
emb|CAN79170.1| hypothetical protein VITISV_012166 [Vitis vinifera]   132   1e-28
ref|XP_002281204.1| PREDICTED: uncharacterized protein LOC100266...   131   2e-28
ref|XP_003554456.1| PREDICTED: uncharacterized protein LOC100805...   125   2e-26

>ref|XP_002530166.1| conserved hypothetical protein [Ricinus communis]
           gi|223530327|gb|EEF32221.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 195

 Score =  140 bits (353), Expect = 5e-31
 Identities = 73/117 (62%), Positives = 82/117 (70%)
 Frame = +3

Query: 387 SKDQENKKMSRRNGNGPKLDLKLNLSPPRGNPHIXXXXXXXXXXXXXXXXXXXXXELNQE 566
           +K+   K MSRRNGNGPKLDLKLNLSPPR +P +                     ELNQ+
Sbjct: 79  TKNTRKKTMSRRNGNGPKLDLKLNLSPPRADPRVESPNRSATVSPTSPPSSCVSSELNQD 138

Query: 567 DQGNLRYSSSPEATSMVLVGCPRCLMYVMLSEEDPRCPKCKSTVLLDVLQHPNSSTT 737
           D   LRYS+SPEATSMVLVGCPRCLMYVMLSE+DP+CPKCKSTVLLD L H N+  T
Sbjct: 139 D--TLRYSNSPEATSMVLVGCPRCLMYVMLSEDDPKCPKCKSTVLLDFL-HENTVQT 192


>ref|XP_002323401.1| predicted protein [Populus trichocarpa] gi|222868031|gb|EEF05162.1|
           predicted protein [Populus trichocarpa]
          Length = 115

 Score =  132 bits (332), Expect = 1e-28
 Identities = 71/114 (62%), Positives = 79/114 (69%)
 Frame = +3

Query: 411 MSRRNGNGPKLDLKLNLSPPRGNPHIXXXXXXXXXXXXXXXXXXXXXELNQEDQGNLRYS 590
           MSRRNG+ PKLDLKLNLSPPR NP +                     E++Q+D   LRYS
Sbjct: 1   MSRRNGSLPKLDLKLNLSPPRVNPRVESPGRSATVSPTSPPSSCVSSEMSQDD--TLRYS 58

Query: 591 SSPEATSMVLVGCPRCLMYVMLSEEDPRCPKCKSTVLLDVLQHPNSSTTTKKPK 752
           SSPEATSMVLVGCPRCLMYVMLSE DP+CPKCKST LLD L H N++TTT   K
Sbjct: 59  SSPEATSMVLVGCPRCLMYVMLSENDPKCPKCKSTWLLDFL-HDNTTTTTTTMK 111


>emb|CAN79170.1| hypothetical protein VITISV_012166 [Vitis vinifera]
          Length = 281

 Score =  132 bits (332), Expect = 1e-28
 Identities = 70/111 (63%), Positives = 78/111 (70%)
 Frame = +3

Query: 408 KMSRRNGNGPKLDLKLNLSPPRGNPHIXXXXXXXXXXXXXXXXXXXXXELNQEDQGNLRY 587
           +MSRRNG  PKLDLKLNLSPPR N H                      ELNQ++   LRY
Sbjct: 161 RMSRRNG--PKLDLKLNLSPPRANRHAESPSRSATLSPTSPPSSCVSSELNQDE--TLRY 216

Query: 588 SSSPEATSMVLVGCPRCLMYVMLSEEDPRCPKCKSTVLLDVLQHPNSSTTT 740
           S+SPEATSMVLVGCPRCLMYVMLSE+DP+CPKCKSTVLLD L   N++TTT
Sbjct: 217 SNSPEATSMVLVGCPRCLMYVMLSEDDPKCPKCKSTVLLDFLHDNNNATTT 267


>ref|XP_002281204.1| PREDICTED: uncharacterized protein LOC100266492 [Vitis vinifera]
          Length = 120

 Score =  131 bits (330), Expect = 2e-28
 Identities = 70/110 (63%), Positives = 77/110 (70%)
 Frame = +3

Query: 411 MSRRNGNGPKLDLKLNLSPPRGNPHIXXXXXXXXXXXXXXXXXXXXXELNQEDQGNLRYS 590
           MSRRNG  PKLDLKLNLSPPR N H                      ELNQ++   LRYS
Sbjct: 1   MSRRNG--PKLDLKLNLSPPRANRHAESPSRSATLSPTSPPSSCVSSELNQDE--TLRYS 56

Query: 591 SSPEATSMVLVGCPRCLMYVMLSEEDPRCPKCKSTVLLDVLQHPNSSTTT 740
           +SPEATSMVLVGCPRCLMYVMLSE+DP+CPKCKSTVLLD L   N++TTT
Sbjct: 57  NSPEATSMVLVGCPRCLMYVMLSEDDPKCPKCKSTVLLDFLHDNNNATTT 106


>ref|XP_003554456.1| PREDICTED: uncharacterized protein LOC100805043 [Glycine max]
          Length = 109

 Score =  125 bits (313), Expect = 2e-26
 Identities = 65/108 (60%), Positives = 73/108 (67%)
 Frame = +3

Query: 411 MSRRNGNGPKLDLKLNLSPPRGNPHIXXXXXXXXXXXXXXXXXXXXXELNQEDQGNLRYS 590
           MSRRN +GPKLDLKLNLSPPR +  +                     ELNQED+    YS
Sbjct: 1   MSRRNESGPKLDLKLNLSPPRADRRLESPTRSATASPTSPPSSCVSSELNQEDKS---YS 57

Query: 591 SSPEATSMVLVGCPRCLMYVMLSEEDPRCPKCKSTVLLDVLQHPNSST 734
           +SPEATSMVLVGCPRCLMYVMLSE+DP+CPKCKSTVLLD L    + T
Sbjct: 58  NSPEATSMVLVGCPRCLMYVMLSEDDPKCPKCKSTVLLDFLHDTKNPT 105


Top