BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00017987
         (1294 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_007025921.1| cytochrome b6 [Vaccinium macrocarpon] gi|374...   427   e-117
ref|NP_043053.1| cytochrome b6 [Zea mays] gi|48478799|ref|YP_024...   417   e-115
gb|AAA85375.1| apocytochrome b6 (alt.) [Oryza sativa] gi|226762|...   419   e-115
ref|XP_002457870.1| hypothetical protein SORBIDRAFT_03g017580 [S...   417   e-115
ref|YP_003097604.1| cytochrome b6 [Dendrocalamus latiflorus] gi|...   417   e-115

>ref|YP_007025921.1| cytochrome b6 [Vaccinium macrocarpon] gi|374093729|gb|AEY84165.1|
            cytochrome b6 (chloroplast) [Vaccinium macrocarpon]
            gi|385198157|gb|AFI44075.1| cytochrome b6 [Vaccinium
            macrocarpon]
          Length = 226

 Score =  427 bits (1098), Expect = e-117
 Identities = 212/226 (93%), Positives = 214/226 (94%)
 Frame = -1

Query: 1057 IYGSRRGSPTYLNKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVA 878
            +YGSRRGS TYLNKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVA
Sbjct: 1    MYGSRRGSLTYLNKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVA 60

Query: 877  TGFAMTFYYRPTVTDAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGG 698
            TGFAMTFYYRPTVT+AFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGG
Sbjct: 61   TGFAMTFYYRPTVTEAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGG 120

Query: 697  FKKPRELTWXXXXXXXXXTASFGVTGYSLPWDQIGYWAVKIVTGVPEAIPVIGSPLVELL 518
            FKKPRELTW         TASFGVTGYSLPWDQIGYWAVKIVTGVPEAIP IGSPLVELL
Sbjct: 121  FKKPRELTWVTGVVLGVLTASFGVTGYSLPWDQIGYWAVKIVTGVPEAIPGIGSPLVELL 180

Query: 517  RGSASVGQSTLTRFYSLHTFVLPLLTAVFMLMHFLMIRKQGISGPL 380
            RGSASVGQSTLTRFYSLHTFVLPLLTAVFMLMHF MIRKQGISGPL
Sbjct: 181  RGSASVGQSTLTRFYSLHTFVLPLLTAVFMLMHFPMIRKQGISGPL 226


>ref|NP_043053.1| cytochrome b6 [Zea mays] gi|48478799|ref|YP_024406.1| cytochrome b6
            [Saccharum hybrid cultivar SP-80-3280]
            gi|118614521|ref|YP_899437.1| cytochrome b6 [Sorghum
            bicolor] gi|902251|emb|CAA60315.1| cytochrome B6 [Zea
            mays] gi|48478701|gb|AAT44721.1| cytochrome b6 [Saccharum
            hybrid cultivar SP80-3280] gi|118201155|gb|ABK79525.1|
            cytochrome b6 [Sorghum bicolor]
          Length = 234

 Score =  417 bits (1072), Expect(2) = e-115
 Identities = 207/226 (91%), Positives = 210/226 (92%)
 Frame = -1

Query: 1057 IYGSRRGSPTYLNKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVA 878
            + G   G  TYLNKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVA
Sbjct: 9    VLGGGVGLVTYLNKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVA 68

Query: 877  TGFAMTFYYRPTVTDAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGG 698
            TGFAMTFYYRPTVT+AF+SVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGG
Sbjct: 69   TGFAMTFYYRPTVTEAFSSVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGG 128

Query: 697  FKKPRELTWXXXXXXXXXTASFGVTGYSLPWDQIGYWAVKIVTGVPEAIPVIGSPLVELL 518
            FKKPRELTW         TASFGVTGYSLPWDQIGYWAVKIVTGVPEAIPVIGSPLVELL
Sbjct: 129  FKKPRELTWVTGVVLAVLTASFGVTGYSLPWDQIGYWAVKIVTGVPEAIPVIGSPLVELL 188

Query: 517  RGSASVGQSTLTRFYSLHTFVLPLLTAVFMLMHFLMIRKQGISGPL 380
            RGSASVGQSTLTRFYSLHTFVLPLLTAVFMLMHF MIRKQGISGPL
Sbjct: 189  RGSASVGQSTLTRFYSLHTFVLPLLTAVFMLMHFPMIRKQGISGPL 234



 Score = 25.8 bits (55), Expect(2) = e-115
 Identities = 11/12 (91%), Positives = 11/12 (91%)
 Frame = -2

Query: 1068 MKVSYTVLGGGV 1033
            MK SYTVLGGGV
Sbjct: 3    MKFSYTVLGGGV 14


>gb|AAA85375.1| apocytochrome b6 (alt.) [Oryza sativa] gi|226762|prf||1604469A
            cytochrome b6
          Length = 232

 Score =  419 bits (1076), Expect(2) = e-115
 Identities = 207/226 (91%), Positives = 211/226 (93%)
 Frame = -1

Query: 1057 IYGSRRGSPTYLNKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVA 878
            + G   G  TYLNKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVA
Sbjct: 7    VLGGGFGLVTYLNKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVA 66

Query: 877  TGFAMTFYYRPTVTDAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGG 698
            TGFAMTFYYRPTVT+AF+SVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGG
Sbjct: 67   TGFAMTFYYRPTVTEAFSSVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGG 126

Query: 697  FKKPRELTWXXXXXXXXXTASFGVTGYSLPWDQIGYWAVKIVTGVPEAIPVIGSPLVELL 518
            FKKPRELTW         TASFGVTGYSLPWDQIGYWAVKIVTGVP+AIPVIGSPLVELL
Sbjct: 127  FKKPRELTWVTGVVLAVLTASFGVTGYSLPWDQIGYWAVKIVTGVPDAIPVIGSPLVELL 186

Query: 517  RGSASVGQSTLTRFYSLHTFVLPLLTAVFMLMHFLMIRKQGISGPL 380
            RGSASVGQSTLTRFYSLHTFVLPLLTAVFMLMHFLMIRKQGISGPL
Sbjct: 187  RGSASVGQSTLTRFYSLHTFVLPLLTAVFMLMHFLMIRKQGISGPL 232



 Score = 24.3 bits (51), Expect(2) = e-115
 Identities = 10/11 (90%), Positives = 10/11 (90%)
 Frame = -2

Query: 1068 MKVSYTVLGGG 1036
            MK SYTVLGGG
Sbjct: 1    MKFSYTVLGGG 11


>ref|XP_002457870.1| hypothetical protein SORBIDRAFT_03g017580 [Sorghum bicolor]
            gi|12437|emb|CAA29000.1| unnamed protein product [Zea
            mays] gi|241929845|gb|EES02990.1| hypothetical protein
            SORBIDRAFT_03g017580 [Sorghum bicolor]
            gi|413933808|gb|AFW68359.1| cytochrome b6 [Zea mays]
          Length = 232

 Score =  417 bits (1072), Expect(2) = e-115
 Identities = 207/226 (91%), Positives = 210/226 (92%)
 Frame = -1

Query: 1057 IYGSRRGSPTYLNKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVA 878
            + G   G  TYLNKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVA
Sbjct: 7    VLGGGVGLVTYLNKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVA 66

Query: 877  TGFAMTFYYRPTVTDAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGG 698
            TGFAMTFYYRPTVT+AF+SVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGG
Sbjct: 67   TGFAMTFYYRPTVTEAFSSVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGG 126

Query: 697  FKKPRELTWXXXXXXXXXTASFGVTGYSLPWDQIGYWAVKIVTGVPEAIPVIGSPLVELL 518
            FKKPRELTW         TASFGVTGYSLPWDQIGYWAVKIVTGVPEAIPVIGSPLVELL
Sbjct: 127  FKKPRELTWVTGVVLAVLTASFGVTGYSLPWDQIGYWAVKIVTGVPEAIPVIGSPLVELL 186

Query: 517  RGSASVGQSTLTRFYSLHTFVLPLLTAVFMLMHFLMIRKQGISGPL 380
            RGSASVGQSTLTRFYSLHTFVLPLLTAVFMLMHF MIRKQGISGPL
Sbjct: 187  RGSASVGQSTLTRFYSLHTFVLPLLTAVFMLMHFPMIRKQGISGPL 232



 Score = 25.8 bits (55), Expect(2) = e-115
 Identities = 11/12 (91%), Positives = 11/12 (91%)
 Frame = -2

Query: 1068 MKVSYTVLGGGV 1033
            MK SYTVLGGGV
Sbjct: 1    MKFSYTVLGGGV 12


>ref|YP_003097604.1| cytochrome b6 [Dendrocalamus latiflorus] gi|255099162|gb|ACT99948.1|
            cytochrome b6 [Dendrocalamus latiflorus]
          Length = 232

 Score =  417 bits (1073), Expect(2) = e-115
 Identities = 207/226 (91%), Positives = 210/226 (92%)
 Frame = -1

Query: 1057 IYGSRRGSPTYLNKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVA 878
            + G   G  TYLNKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVA
Sbjct: 7    VLGGGLGLVTYLNKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVA 66

Query: 877  TGFAMTFYYRPTVTDAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGG 698
            TGFAMTFYYRPTVT+AF+SVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGG
Sbjct: 67   TGFAMTFYYRPTVTEAFSSVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGG 126

Query: 697  FKKPRELTWXXXXXXXXXTASFGVTGYSLPWDQIGYWAVKIVTGVPEAIPVIGSPLVELL 518
            FKKPRELTW         TASFGVTGYSLPWDQIGYWAVKIVTGVPEAIPVIGSPLVELL
Sbjct: 127  FKKPRELTWVTGVVLAVLTASFGVTGYSLPWDQIGYWAVKIVTGVPEAIPVIGSPLVELL 186

Query: 517  RGSASVGQSTLTRFYSLHTFVLPLLTAVFMLMHFLMIRKQGISGPL 380
            RGSASVGQSTLTRFYSLHTFVLPLLTAVFMLMHF MIRKQGISGPL
Sbjct: 187  RGSASVGQSTLTRFYSLHTFVLPLLTAVFMLMHFPMIRKQGISGPL 232



 Score = 24.6 bits (52), Expect(2) = e-115
 Identities = 10/12 (83%), Positives = 11/12 (91%)
 Frame = -2

Query: 1068 MKVSYTVLGGGV 1033
            MK SYTVLGGG+
Sbjct: 1    MKFSYTVLGGGL 12