BLASTX nr result
ID: Bupleurum21_contig00017981
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Bupleurum21_contig00017981
(1941 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002277600.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 778 0.0
emb|CBI27769.3| unnamed protein product [Vitis vinifera] 763 0.0
ref|XP_002325490.1| predicted protein [Populus trichocarpa] gi|2... 762 0.0
ref|XP_002526935.1| dead box ATP-dependent RNA helicase, putativ... 737 0.0
ref|XP_003533799.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP... 723 0.0
>ref|XP_002277600.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 17-like [Vitis
vinifera]
Length = 600
Score = 778 bits (2008), Expect = 0.0
Identities = 396/595 (66%), Positives = 469/595 (78%), Gaps = 8/595 (1%)
Frame = -2
Query: 1916 TTEEE---NPNQIIQGDDKVFASCTFETLGLHPRLCTILQEKLGFNGPTHIQAQAIPVLL 1746
TTEEE G+ ++FASC+F +LGLHP LC L+E++GF PT +QA+AIPV+L
Sbjct: 7 TTEEEMKKTKQNSYNGESEIFASCSFSSLGLHPTLCDQLRERMGFEVPTIVQAEAIPVIL 66
Query: 1745 SGKHALVNAATGTGKTLVYLSIVVHHLLLQNEKEKINRSDGTYALVLVPTHELCMQVYET 1566
+G+H LVNAATGTGKT+ YL+ V++HL +I RS GT+ALVLVPT ELCMQVYE
Sbjct: 67 AGRHVLVNAATGTGKTIAYLAPVINHL--HKYDPRIERSAGTFALVLVPTRELCMQVYEI 124
Query: 1565 LDKMLHRMFWLVPGYIMGGEKRTKEKARLRKGIAILVSTPGRLLDHLKNTSSFVYTNLRW 1386
L K+LHR W+VPGY+MGGE R+KEKARLRKGI+ILV+TPGRLLDHLKNTSSF++TNLRW
Sbjct: 125 LQKLLHRFHWIVPGYVMGGENRSKEKARLRKGISILVATPGRLLDHLKNTSSFLHTNLRW 184
Query: 1385 LIFDEADRILELGYGKEIEEILTVLGSRQDKSTVKENKV----QRQNLLLSATLNDKVNQ 1218
+IFDEADRILELG+GKEIEEIL +LGSR + T++E+ V QRQNLLLSATLN+KVN
Sbjct: 185 IIFDEADRILELGFGKEIEEILDLLGSRTNGPTIREDAVTSEFQRQNLLLSATLNEKVNH 244
Query: 1217 LANISLENPVRIGLDDKKKQLKPSFNSISSLEVEVDNASDGPENLINSANGEYTLPDQLI 1038
LA ISLENPV IGLD KK Q KP S+E +VD S+ +I+ +NG+Y LP QL+
Sbjct: 245 LAQISLENPVTIGLDGKKMQPKPPLEHFGSVEFDVDEDSEKLHKIISPSNGDYKLPAQLV 304
Query: 1037 QRYVKVSCGSRLVVLMSILKKLFEGSATQKIVVFFSTCDAVDFHYLLLSKFQWPPNSVSE 858
QRYVKV CGSRLVVL+SILK LFE A+QKIVVFFSTCDAVDFHY L S F WP N E
Sbjct: 305 QRYVKVPCGSRLVVLLSILKHLFEREASQKIVVFFSTCDAVDFHYSLFSAFLWPANLHPE 364
Query: 857 TEPK-FFLECKTYKLHGNMDHENRRTAFNAFKTEKSALLLSTDVSARGLDFPRVRCIIQY 681
TE + FL KT++LHGNM HE+RRT F FK EKSALLLSTDV+ARGLDFP+VRCIIQY
Sbjct: 365 TEDRQMFLRFKTFQLHGNMKHEDRRTTFQTFKKEKSALLLSTDVAARGLDFPKVRCIIQY 424
Query: 680 DSPGEATEYVHRVGRTARLGERGDSLLFLQPIEIDYLDELKRHGVXXXXXXXXXXLNSMP 501
DSPGEA+EYVHRVGRTARLGERGDSLLFLQP+E+DYL +L++HGV L+S P
Sbjct: 425 DSPGEASEYVHRVGRTARLGERGDSLLFLQPVEMDYLQDLEKHGVSLTEYSLLKVLDSFP 484
Query: 500 SYGRNLNVKKFVSLEMHHWVISLQKALESFVITKLNRKKLAMRAFCSWVRAYSAHRGDLK 321
G+ ++KKF+SLEMH W + LQKALESF+ + KKLA AFCSWVRAY+AHRG+LK
Sbjct: 485 LSGQKHHIKKFISLEMHPWSLYLQKALESFIFAEPKMKKLAKDAFCSWVRAYTAHRGELK 544
Query: 320 SIFMVKNLHLGHVAKSFALKEQPSMVGKSYHKQMKKRGRDQKQSGGSKKRKVLRE 156
IF VK LHLGHVAKSFALK+QPS+VGKS Q KKR RDQKQ G SK++K+ R+
Sbjct: 545 RIFQVKKLHLGHVAKSFALKDQPSLVGKSMQMQTKKRKRDQKQQGLSKRKKLARK 599
>emb|CBI27769.3| unnamed protein product [Vitis vinifera]
Length = 584
Score = 763 bits (1969), Expect = 0.0
Identities = 390/591 (65%), Positives = 460/591 (77%), Gaps = 4/591 (0%)
Frame = -2
Query: 1916 TTEEE---NPNQIIQGDDKVFASCTFETLGLHPRLCTILQEKLGFNGPTHIQAQAIPVLL 1746
TTEEE G+ ++FASC+F +LGLHP LC L+E++GF PT +QA+AIPV+L
Sbjct: 7 TTEEEMKKTKQNSYNGESEIFASCSFSSLGLHPTLCDQLRERMGFEVPTIVQAEAIPVIL 66
Query: 1745 SGKHALVNAATGTGKTLVYLSIVVHHLLLQNEKEKINRSDGTYALVLVPTHELCMQVYET 1566
+G+H LVNAATGTGKT+ YL+ V++HL +I RS GT+ALVLVPT ELCMQVYE
Sbjct: 67 AGRHVLVNAATGTGKTIAYLAPVINHL--HKYDPRIERSAGTFALVLVPTRELCMQVYEI 124
Query: 1565 LDKMLHRMFWLVPGYIMGGEKRTKEKARLRKGIAILVSTPGRLLDHLKNTSSFVYTNLRW 1386
L K+LHR W+VPGY+MGGE R+KEKARLRKGI+ILV+TPGRLLDHLKNTSSF++TNLRW
Sbjct: 125 LQKLLHRFHWIVPGYVMGGENRSKEKARLRKGISILVATPGRLLDHLKNTSSFLHTNLRW 184
Query: 1385 LIFDEADRILELGYGKEIEEILTVLGSRQDKSTVKENKVQRQNLLLSATLNDKVNQLANI 1206
+IFDEADRILELG+GKEIEEIL +L + QRQNLLLSATLN+KVN LA I
Sbjct: 185 IIFDEADRILELGFGKEIEEILDLL------------EFQRQNLLLSATLNEKVNHLAQI 232
Query: 1205 SLENPVRIGLDDKKKQLKPSFNSISSLEVEVDNASDGPENLINSANGEYTLPDQLIQRYV 1026
SLENPV IGLD KK Q KP S+E +VD S+ +I+ +NG+Y LP QL+QRYV
Sbjct: 233 SLENPVTIGLDGKKMQPKPPLEHFGSVEFDVDEDSEKLHKIISPSNGDYKLPAQLVQRYV 292
Query: 1025 KVSCGSRLVVLMSILKKLFEGSATQKIVVFFSTCDAVDFHYLLLSKFQWPPNSVSETEPK 846
KV CGSRLVVL+SILK LFE A+QKIVVFFSTCDAVDFHY L S F WP N ETE +
Sbjct: 293 KVPCGSRLVVLLSILKHLFEREASQKIVVFFSTCDAVDFHYSLFSAFLWPANLHPETEDR 352
Query: 845 -FFLECKTYKLHGNMDHENRRTAFNAFKTEKSALLLSTDVSARGLDFPRVRCIIQYDSPG 669
FL KT++LHGNM HE+RRT F FK EKSALLLSTDV+ARGLDFP+VRCIIQYDSPG
Sbjct: 353 QMFLRFKTFQLHGNMKHEDRRTTFQTFKKEKSALLLSTDVAARGLDFPKVRCIIQYDSPG 412
Query: 668 EATEYVHRVGRTARLGERGDSLLFLQPIEIDYLDELKRHGVXXXXXXXXXXLNSMPSYGR 489
EA+EYVHRVGRTARLGERGDSLLFLQP+E+DYL +L++HGV L+S P G+
Sbjct: 413 EASEYVHRVGRTARLGERGDSLLFLQPVEMDYLQDLEKHGVSLTEYSLLKVLDSFPLSGQ 472
Query: 488 NLNVKKFVSLEMHHWVISLQKALESFVITKLNRKKLAMRAFCSWVRAYSAHRGDLKSIFM 309
++KKF+SLEMH W + LQKALESF+ + KKLA AFCSWVRAY+AHRG+LK IF
Sbjct: 473 KHHIKKFISLEMHPWSLYLQKALESFIFAEPKMKKLAKDAFCSWVRAYTAHRGELKRIFQ 532
Query: 308 VKNLHLGHVAKSFALKEQPSMVGKSYHKQMKKRGRDQKQSGGSKKRKVLRE 156
VK LHLGHVAKSFALK+QPS+VGKS Q KKR RDQKQ G SK++K+ R+
Sbjct: 533 VKKLHLGHVAKSFALKDQPSLVGKSMQMQTKKRKRDQKQQGLSKRKKLARK 583
>ref|XP_002325490.1| predicted protein [Populus trichocarpa] gi|222862365|gb|EEE99871.1|
predicted protein [Populus trichocarpa]
Length = 594
Score = 762 bits (1967), Expect = 0.0
Identities = 388/592 (65%), Positives = 464/592 (78%), Gaps = 7/592 (1%)
Frame = -2
Query: 1910 EEENPNQIIQGDDKVFASCTFETLGLHPRLCTILQEKLGFNGPTHIQAQAIPVLLSGKHA 1731
+E+ NQ ++FASC+F LGLHP LC LQE+LGF GPT +QAQAIPV+LSG+H
Sbjct: 7 KEDKDNQ----KSEIFASCSFSALGLHPSLCNQLQERLGFEGPTLVQAQAIPVILSGRHV 62
Query: 1730 LVNAATGTGKTLVYLSIVVHHLLLQNEKEKINRSDGTYALVLVPTHELCMQVYETLDKML 1551
LVNAATGTGKT+ YL+ ++HHL + +I+R +GT+ALVLVPT ELC+QVYE L K+L
Sbjct: 63 LVNAATGTGKTVAYLAPIIHHL--HSYPSRIDRENGTFALVLVPTRELCLQVYEILQKLL 120
Query: 1550 HRMFWLVPGYIMGGEKRTKEKARLRKGIAILVSTPGRLLDHLKNTSSFVYTNLRWLIFDE 1371
HR W+VPGY+MGGE R+KEKARLRKGI+ILV+TPGRLLDHLKNT+SFV+TNLRW+IFDE
Sbjct: 121 HRFHWIVPGYVMGGENRSKEKARLRKGISILVATPGRLLDHLKNTASFVHTNLRWIIFDE 180
Query: 1370 ADRILELGYGKEIEEILTVLGSRQDKSTVKENKV------QRQNLLLSATLNDKVNQLAN 1209
ADRILELG+GKEIEEIL +LGSRQ S N+V Q QNLLLSATLN+KVN LA
Sbjct: 181 ADRILELGFGKEIEEILDLLGSRQIGSVGNGNQVSSLSNFQGQNLLLSATLNEKVNHLAK 240
Query: 1208 ISLENPVRIGLDDKKKQLKPSFNSISSLEVEVDNASDGPENLINSANGEYTLPDQLIQRY 1029
ISLENPV IGLDDKK Q S + I + E + D+ G + NS+ G+Y LP QL+QRY
Sbjct: 241 ISLENPVMIGLDDKKIQPDQSVDHIETAESDEDDGL-GYSKVKNSSTGDYKLPAQLVQRY 299
Query: 1028 VKVSCGSRLVVLMSILKKLFEGSATQKIVVFFSTCDAVDFHYLLLSKFQWPPNSVSETE- 852
VKV CGSRL VL+SILK LFE A+ KIVVFFSTCDAVDFHY LLS+F W PNS SE E
Sbjct: 300 VKVPCGSRLAVLLSILKNLFEREASHKIVVFFSTCDAVDFHYSLLSEFCWSPNSQSEAEH 359
Query: 851 PKFFLECKTYKLHGNMDHENRRTAFNAFKTEKSALLLSTDVSARGLDFPRVRCIIQYDSP 672
+ FL C T +LHGNM E+RR F AFKTEKSALLLSTD++ARGLDFP+VRCI+QYDSP
Sbjct: 360 TERFLRCNTLRLHGNMKQEDRRNTFQAFKTEKSALLLSTDIAARGLDFPKVRCIVQYDSP 419
Query: 671 GEATEYVHRVGRTARLGERGDSLLFLQPIEIDYLDELKRHGVXXXXXXXXXXLNSMPSYG 492
GEATEYVHRVGRTARLGE+GDSLLFLQP+E+DYL +L++HGV L S P YG
Sbjct: 420 GEATEYVHRVGRTARLGEKGDSLLFLQPVEVDYLHDLEKHGVSLTEYPILKVLGSFPLYG 479
Query: 491 RNLNVKKFVSLEMHHWVISLQKALESFVITKLNRKKLAMRAFCSWVRAYSAHRGDLKSIF 312
+ +KFVSL++H WV+ LQ+ALESF++++ KLA AFCSWVRAY+AHRGDLK IF
Sbjct: 480 QVYRARKFVSLDLHPWVLYLQRALESFILSEPRMNKLAQTAFCSWVRAYTAHRGDLKRIF 539
Query: 311 MVKNLHLGHVAKSFALKEQPSMVGKSYHKQMKKRGRDQKQSGGSKKRKVLRE 156
MVK LHLGHV++SF LK+QPS+VG+S+ Q KKR R+ KQ G SK+RK R+
Sbjct: 540 MVKKLHLGHVSRSFGLKQQPSLVGQSFQNQSKKRKREGKQKGLSKQRKFTRK 591
>ref|XP_002526935.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
gi|223533687|gb|EEF35422.1| dead box ATP-dependent RNA
helicase, putative [Ricinus communis]
Length = 603
Score = 737 bits (1902), Expect = 0.0
Identities = 374/589 (63%), Positives = 457/589 (77%), Gaps = 7/589 (1%)
Frame = -2
Query: 1910 EEENPNQIIQGDDKVFASCTFETLGLHPRLCTILQEKLGFNGPTHIQAQAIPVLLSGKHA 1731
EEE + + ++FASC+F LGLHP LC L+E++GF PT +QAQAIPV+LSG+H
Sbjct: 13 EEEEAKETKNNNPEMFASCSFLNLGLHPTLCDQLRERMGFEAPTTVQAQAIPVVLSGRHV 72
Query: 1730 LVNAATGTGKTLVYLSIVVHHLLLQNEKEKINRSDGTYALVLVPTHELCMQVYETLDKML 1551
LVNAATGTGKT+ YL+ ++HHL Q+ +I R+ GT+ALVLVPT ELC+QVYE L +L
Sbjct: 73 LVNAATGTGKTVAYLAPIIHHL--QSYSPRIERAHGTFALVLVPTRELCLQVYEILQGLL 130
Query: 1550 HRMFWLVPGYIMGGEKRTKEKARLRKGIAILVSTPGRLLDHLKNTSSFVYTNLRWLIFDE 1371
HR W+VPGYIMGGE R+KEKARLRKGI+ILV+TPGRLLDHLKNTSSF +TNLRW+IFDE
Sbjct: 131 HRFHWIVPGYIMGGESRSKEKARLRKGISILVATPGRLLDHLKNTSSFSHTNLRWIIFDE 190
Query: 1370 ADRILELGYGKEIEEILTVLGSRQDKSTVKENK------VQRQNLLLSATLNDKVNQLAN 1209
ADRILELG+GKEIE+IL +LGSR +S K N+ QRQNLLLSATLN+KVN LAN
Sbjct: 191 ADRILELGFGKEIEDILDLLGSRLTRSVGKGNRDSSISNYQRQNLLLSATLNEKVNHLAN 250
Query: 1208 ISLENPVRIGLDDKKKQLKPSFNSISSLEVEVDNASDGPENLINSANGEYTLPDQLIQRY 1029
ISLENPV IGLDD+K Q +P SL+ + D+ + P ++ + G++ +P QL+Q+Y
Sbjct: 251 ISLENPVMIGLDDEKMQPEPLLEHTKSLKSDADDELEHPSKVLKPSTGDFKVPVQLVQKY 310
Query: 1028 VKVSCGSRLVVLMSILKKLFEGSATQKIVVFFSTCDAVDFHYLLLSKFQWPPNSVSETEP 849
VKV CGSRL L+SILK LFE A+QKIVVFFSTCDAVDFHY LLS+F++ S SE E
Sbjct: 311 VKVPCGSRLATLLSILKHLFEKRASQKIVVFFSTCDAVDFHYSLLSEFRFSCTSQSEAEA 370
Query: 848 -KFFLECKTYKLHGNMDHENRRTAFNAFKTEKSALLLSTDVSARGLDFPRVRCIIQYDSP 672
+ FL CKT++LHGNM E+RR F AFK++K ALLLSTDV+ARGLD P+V IIQYD+P
Sbjct: 371 AEMFLRCKTFRLHGNMKQEDRRDTFQAFKSDKLALLLSTDVAARGLDLPKVTWIIQYDTP 430
Query: 671 GEATEYVHRVGRTARLGERGDSLLFLQPIEIDYLDELKRHGVXXXXXXXXXXLNSMPSYG 492
GEATEYVHRVGRTAR+GE+GDSLLFLQP+E+DYL EL++HGV L+S Y
Sbjct: 431 GEATEYVHRVGRTARMGEKGDSLLFLQPVEVDYLQELQKHGVSLTEYPILKMLDSFSFYE 490
Query: 491 RNLNVKKFVSLEMHHWVISLQKALESFVITKLNRKKLAMRAFCSWVRAYSAHRGDLKSIF 312
+ KKFVSLE H W++SLQKALESF+ + KLA AF SWVRAY+AHRG+LK IF
Sbjct: 491 QMHRNKKFVSLESHPWLLSLQKALESFIAAQPKMNKLAQNAFLSWVRAYTAHRGELKRIF 550
Query: 311 MVKNLHLGHVAKSFALKEQPSMVGKSYHKQMKKRGRDQKQSGGSKKRKV 165
MV+ LHLGHVAKSFALK+QPS+VGK++ KQ KKR R+QK G SK+RK+
Sbjct: 551 MVQKLHLGHVAKSFALKQQPSVVGKAFQKQSKKRKREQKPKGLSKRRKI 599
>ref|XP_003533799.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase
17-like [Glycine max]
Length = 596
Score = 723 bits (1866), Expect = 0.0
Identities = 368/577 (63%), Positives = 457/577 (79%), Gaps = 6/577 (1%)
Frame = -2
Query: 1877 DDKVFASCTFETLGLHPRLCTILQEKLGFNGPTHIQAQAIPVLLSGKHALVNAATGTGKT 1698
++ VFASC+F +LGL LC L+++LGF PT +QAQAIPV+LSG+HALVNAATGTGKT
Sbjct: 18 NNDVFASCSFSSLGLDSNLCEQLRDRLGFEVPTLVQAQAIPVILSGRHALVNAATGTGKT 77
Query: 1697 LVYLSIVVHHLLLQNEKEKINRSDGTYALVLVPTHELCMQVYETLDKMLHRMFWLVPGYI 1518
+ YL+ ++HHL Q + +I RSDGT+ALVLVPT ELC+QVYE L K+LHR W+VPGYI
Sbjct: 78 VAYLAPIIHHL--QGYENRIQRSDGTFALVLVPTRELCLQVYEILQKLLHRFHWIVPGYI 135
Query: 1517 MGGEKRTKEKARLRKGIAILVSTPGRLLDHLKNTSSFVYTNLRWLIFDEADRILELGYGK 1338
MGGEKR+KEK+RLRKGI+IL++TPGRLLDHLKNT++F+Y+NLRW+IFDEADRILELG+GK
Sbjct: 136 MGGEKRSKEKSRLRKGISILIATPGRLLDHLKNTTAFLYSNLRWIIFDEADRILELGFGK 195
Query: 1337 EIEEILTVLGSR------QDKSTVKENKVQRQNLLLSATLNDKVNQLANISLENPVRIGL 1176
+IEEIL +LGSR Q+ + + +K+QRQNLLLSATLN+KVN LA +SL+NPV IGL
Sbjct: 196 DIEEILDLLGSRKKGHGDQENTVLTHSKIQRQNLLLSATLNEKVNHLAKMSLDNPVMIGL 255
Query: 1175 DDKKKQLKPSFNSISSLEVEVDNASDGPENLINSANGEYTLPDQLIQRYVKVSCGSRLVV 996
D KK + + + S E + D+ + G+Y +P QLIQRY+KV CGSRL V
Sbjct: 256 DGKKMEPISTIKRLDSSESDEDSEDKYSSKV--PTVGDYKVPIQLIQRYMKVPCGSRLPV 313
Query: 995 LMSILKKLFEGSATQKIVVFFSTCDAVDFHYLLLSKFQWPPNSVSETEPKFFLECKTYKL 816
L+SILK LFE +QK+V+FFSTCDAVDFHY LLS+FQ+ +E + FL CKT++L
Sbjct: 314 LLSILKHLFEREPSQKVVLFFSTCDAVDFHYSLLSEFQFSSYPQTEGVRQVFLGCKTFRL 373
Query: 815 HGNMDHENRRTAFNAFKTEKSALLLSTDVSARGLDFPRVRCIIQYDSPGEATEYVHRVGR 636
HGNM E+RRT+F AFKTEKSALLLSTDVSARGLDFP+VRCIIQYDSPGEATEYVHRVGR
Sbjct: 374 HGNMQQEDRRTSFQAFKTEKSALLLSTDVSARGLDFPKVRCIIQYDSPGEATEYVHRVGR 433
Query: 635 TARLGERGDSLLFLQPIEIDYLDELKRHGVXXXXXXXXXXLNSMPSYGRNLNVKKFVSLE 456
TARLGERG+SLLFLQP+EIDYL +L++HGV L+S P + + KK V LE
Sbjct: 434 TARLGERGESLLFLQPVEIDYLQDLEKHGVSLTEYPVLKVLDSFPL--QKNHTKKSVFLE 491
Query: 455 MHHWVISLQKALESFVITKLNRKKLAMRAFCSWVRAYSAHRGDLKSIFMVKNLHLGHVAK 276
H WV+ LQKALE+F+++K + A +AFCSWVRAY+AHRG+LK I M+K LHLGHVAK
Sbjct: 492 SHPWVLCLQKALEAFIMSKPEMDEHARKAFCSWVRAYTAHRGELKRIXMIKKLHLGHVAK 551
Query: 275 SFALKEQPSMVGKSYHKQMKKRGRDQKQSGGSKKRKV 165
SFALK+QPS+VG+S+ KQ KKR R +K++G +KKRKV
Sbjct: 552 SFALKQQPSLVGQSFQKQNKKRKRFEKKNGFTKKRKV 588