BLASTX nr result

ID: Bupleurum21_contig00017976 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00017976
         (736 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAQ82703.1| potyviral capsid protein interacting protein 2b [...   209   6e-52
gb|AAQ82702.1| potyviral capsid protein interacting protein 2a [...   206   4e-51
gb|AAQ82701.1| potyviral capsid protein interacting protein 1 [N...   204   2e-50
ref|XP_002520159.1| Curved DNA-binding protein, putative [Ricinu...   200   3e-49
ref|XP_002511507.1| Chaperone protein dnaJ, putative [Ricinus co...   197   1e-48

>gb|AAQ82703.1| potyviral capsid protein interacting protein 2b [Nicotiana tabacum]
          Length = 305

 Score =  209 bits (531), Expect = 6e-52
 Identities = 98/120 (81%), Positives = 112/120 (93%)
 Frame = -1

Query: 736 TFPEKGNQEPGVTPGDLIFIVDEKPHAVFKRDGNDLVLHKRISLLDALTGKTIKLTTLDG 557
           TFPEKGN EPG TPGDLIF++DEKPHAVFKRDGNDLV++++ISLLDALTGKTI L TLDG
Sbjct: 181 TFPEKGNYEPGATPGDLIFVIDEKPHAVFKRDGNDLVINQKISLLDALTGKTISLITLDG 240

Query: 556 RDLRIPIKDVVKPGHEEVIPDEGMPISKEPGKRGNLRIKFDIKFPSRLTSDQKSDLRRVL 377
           R+L IPI DVVKPGHE +IP+EGMPISKE GK+GNL+IKFDIKFPSRL++DQKSD+RRVL
Sbjct: 241 RELTIPITDVVKPGHEHIIPNEGMPISKERGKKGNLKIKFDIKFPSRLSADQKSDIRRVL 300


>gb|AAQ82702.1| potyviral capsid protein interacting protein 2a [Nicotiana tabacum]
          Length = 305

 Score =  206 bits (524), Expect = 4e-51
 Identities = 96/120 (80%), Positives = 111/120 (92%)
 Frame = -1

Query: 736 TFPEKGNQEPGVTPGDLIFIVDEKPHAVFKRDGNDLVLHKRISLLDALTGKTIKLTTLDG 557
           TFPEKGN EPG TPGDLIF++DEKPHAVFKRDGNDL ++++ISLLDALTGKTI L TLDG
Sbjct: 181 TFPEKGNYEPGATPGDLIFVIDEKPHAVFKRDGNDLEINQKISLLDALTGKTISLITLDG 240

Query: 556 RDLRIPIKDVVKPGHEEVIPDEGMPISKEPGKRGNLRIKFDIKFPSRLTSDQKSDLRRVL 377
           R+L IPI D+VKPGHE +IP+EGMPISKE GK+GNL+IKFDIKFPSRL++DQKSD+RRVL
Sbjct: 241 RELTIPITDIVKPGHEHIIPNEGMPISKERGKKGNLKIKFDIKFPSRLSADQKSDIRRVL 300


>gb|AAQ82701.1| potyviral capsid protein interacting protein 1 [Nicotiana tabacum]
          Length = 306

 Score =  204 bits (518), Expect = 2e-50
 Identities = 94/121 (77%), Positives = 110/121 (90%)
 Frame = -1

Query: 736 TFPEKGNQEPGVTPGDLIFIVDEKPHAVFKRDGNDLVLHKRISLLDALTGKTIKLTTLDG 557
           TFPEKGN EPG  PGDLIF++DEKPH VFKRDGNDLV++++ISL+DAL+GK I L TLDG
Sbjct: 182 TFPEKGNHEPGAAPGDLIFVIDEKPHDVFKRDGNDLVINQKISLVDALSGKIINLATLDG 241

Query: 556 RDLRIPIKDVVKPGHEEVIPDEGMPISKEPGKRGNLRIKFDIKFPSRLTSDQKSDLRRVL 377
           R+L IPI DVVKPGHE++I DEGMPISKEPGK+GNLRIKF++KFPSRL+SDQK D+RRVL
Sbjct: 242 RELTIPITDVVKPGHEQIIADEGMPISKEPGKKGNLRIKFEVKFPSRLSSDQKLDIRRVL 301

Query: 376 G 374
           G
Sbjct: 302 G 302


>ref|XP_002520159.1| Curved DNA-binding protein, putative [Ricinus communis]
           gi|223540651|gb|EEF42214.1| Curved DNA-binding protein,
           putative [Ricinus communis]
          Length = 321

 Score =  200 bits (508), Expect = 3e-49
 Identities = 92/122 (75%), Positives = 111/122 (90%)
 Frame = -1

Query: 736 TFPEKGNQEPGVTPGDLIFIVDEKPHAVFKRDGNDLVLHKRISLLDALTGKTIKLTTLDG 557
           TFPEKGNQEPGV   DLIF+VDEKPH+VFKRDGNDL++++++SLL+ALTGKT+ LTTLDG
Sbjct: 197 TFPEKGNQEPGVVAADLIFVVDEKPHSVFKRDGNDLIVNQKLSLLEALTGKTVDLTTLDG 256

Query: 556 RDLRIPIKDVVKPGHEEVIPDEGMPISKEPGKRGNLRIKFDIKFPSRLTSDQKSDLRRVL 377
           R L IP+ D++KPGHE VIP+EGMPISKEP K+G LRIKFD+ FPSRLT++QKSDL+RVL
Sbjct: 257 RYLSIPVTDIIKPGHEIVIPNEGMPISKEPHKKGKLRIKFDVTFPSRLTAEQKSDLKRVL 316

Query: 376 GG 371
           GG
Sbjct: 317 GG 318


>ref|XP_002511507.1| Chaperone protein dnaJ, putative [Ricinus communis]
           gi|223550622|gb|EEF52109.1| Chaperone protein dnaJ,
           putative [Ricinus communis]
          Length = 333

 Score =  197 bits (502), Expect = 1e-48
 Identities = 90/122 (73%), Positives = 111/122 (90%)
 Frame = -1

Query: 736 TFPEKGNQEPGVTPGDLIFIVDEKPHAVFKRDGNDLVLHKRISLLDALTGKTIKLTTLDG 557
           TFPEKGNQEPG+ P DLIF+VDEK HA++ RDGNDLV+++ I+LL+ALTGKT+ LTTLDG
Sbjct: 210 TFPEKGNQEPGIIPADLIFVVDEKQHAIYMRDGNDLVVNQEITLLEALTGKTLDLTTLDG 269

Query: 556 RDLRIPIKDVVKPGHEEVIPDEGMPISKEPGKRGNLRIKFDIKFPSRLTSDQKSDLRRVL 377
           RDL IP+ D+VKPG E V+P+EGMPIS+EPGK+GNLRIK D+++PSRLTS+QKS+LRRVL
Sbjct: 270 RDLMIPLTDIVKPGAEVVVPNEGMPISREPGKKGNLRIKIDVRYPSRLTSEQKSELRRVL 329

Query: 376 GG 371
           GG
Sbjct: 330 GG 331


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