BLASTX nr result

ID: Bupleurum21_contig00017941 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00017941
         (404 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD72964.1| GRAS9 [Solanum lycopersicum]                           142   4e-32
ref|NP_001234327.1| GRAS10 protein [Solanum lycopersicum] gi|894...   140   1e-31
ref|XP_002272471.1| PREDICTED: scarecrow-like protein 8-like [Vi...   137   1e-30
ref|XP_002513664.1| DELLA protein GAI, putative [Ricinus communi...   136   2e-30
emb|CAX11683.1| scarecrow-like transcription factor SCL8-L prote...   135   5e-30

>gb|ABD72964.1| GRAS9 [Solanum lycopersicum]
          Length = 496

 Score =  142 bits (357), Expect = 4e-32
 Identities = 78/131 (59%), Positives = 97/131 (74%), Gaps = 2/131 (1%)
 Frame = -1

Query: 404 GKNDVAVDALTRLTKLGNTRGTAEQRLVSYMASALTSRVNCTEYSAFASELYAEDHAESV 225
           GK +VAV  LTRL ++ + RG++EQRL +YM SAL SRVN TEY     EL +++HA S 
Sbjct: 139 GKTNVAVQILTRLAQVADVRGSSEQRLTAYMVSALRSRVNSTEYPPPVMELRSKEHAVSA 198

Query: 224 QMMYEISPCFKLGFMAANSAILEAVSGSGPQNDTLHVVDFDIGQGRQYMHLLHALAA--N 51
           Q +YEISPCFKLGFMAAN AI+EAV+   P N  +HV+DFDIGQG QY+HLLHALA+   
Sbjct: 199 QNLYEISPCFKLGFMAANFAIVEAVA-DHPSN-KIHVIDFDIGQGGQYLHLLHALASKKT 256

Query: 50  GITRTLKITAI 18
               +L+ITAI
Sbjct: 257 DYPISLRITAI 267


>ref|NP_001234327.1| GRAS10 protein [Solanum lycopersicum] gi|89474476|gb|ABD72965.1|
           GRAS10 [Solanum lycopersicum]
          Length = 631

 Score =  140 bits (353), Expect = 1e-31
 Identities = 75/133 (56%), Positives = 98/133 (73%), Gaps = 2/133 (1%)
 Frame = -1

Query: 404 GKNDVAVDALTRLTKLGNTRGTAEQRLVSYMASALTSRVNCTEYSAFASELYAEDHAESV 225
           GKNDVA++ LTRL+++ N RG+++QRL +YM +AL SR+N  +Y     EL +++H E+ 
Sbjct: 276 GKNDVALEILTRLSQVANIRGSSDQRLTAYMVAALRSRLNPVDYPPPVLELQSKEHTETT 335

Query: 224 QMMYEISPCFKLGFMAANSAILEAVSGSGPQNDTLHVVDFDIGQGRQYMHLLHALAA--N 51
             +YE+SPCFKLGFMAAN AILEAV+   P N  LHV+DFDIGQG QY+HLLHALAA  +
Sbjct: 336 HNLYEVSPCFKLGFMAANLAILEAVA-DHPFN-KLHVIDFDIGQGGQYLHLLHALAAKKS 393

Query: 50  GITRTLKITAICD 12
                LKITA  +
Sbjct: 394 NNPAVLKITAFTE 406


>ref|XP_002272471.1| PREDICTED: scarecrow-like protein 8-like [Vitis vinifera]
          Length = 614

 Score =  137 bits (344), Expect = 1e-30
 Identities = 74/133 (55%), Positives = 94/133 (70%), Gaps = 2/133 (1%)
 Frame = -1

Query: 404 GKNDVAVDALTRLTKLGNTRGTAEQRLVSYMASALTSRVNCTEYSAFASELYAEDHAESV 225
           G  D A+++LTRLT + N RG +EQRL +YMASAL SR++  E     +ELY++DH  + 
Sbjct: 258 GMLDAAMESLTRLTLVANARGNSEQRLAAYMASALKSRLSAAENPPPVAELYSKDHIMAT 317

Query: 224 QMMYEISPCFKLGFMAANSAILEAVSGSGPQNDTLHVVDFDIGQGRQYMHLLHALAA--N 51
           QM+Y++SPCFKLGFMAAN AILE  S S       HV+DFDIGQG QY++L+HAL A  N
Sbjct: 318 QMLYDMSPCFKLGFMAANLAILETTS-SEQSAAKFHVLDFDIGQGGQYVNLVHALGARQN 376

Query: 50  GITRTLKITAICD 12
           G   +LKIT I D
Sbjct: 377 GKHTSLKITTIAD 389


>ref|XP_002513664.1| DELLA protein GAI, putative [Ricinus communis]
           gi|223547572|gb|EEF49067.1| DELLA protein GAI, putative
           [Ricinus communis]
          Length = 615

 Score =  136 bits (342), Expect = 2e-30
 Identities = 68/133 (51%), Positives = 94/133 (70%), Gaps = 2/133 (1%)
 Frame = -1

Query: 404 GKNDVAVDALTRLTKLGNTRGTAEQRLVSYMASALTSRVNCTEYSAFASELYAEDHAESV 225
           GK +VA + LTR++++ N RG +EQRL+ YM+ AL SR+N  +     +EL+A++H  S 
Sbjct: 258 GKTEVASEILTRVSQVSNPRGNSEQRLMEYMSMALKSRLNSADNPPPVAELFAKEHIAST 317

Query: 224 QMMYEISPCFKLGFMAANSAILEAVSGSGPQNDTLHVVDFDIGQGRQYMHLLHALA--AN 51
           Q++YE+SPCFKLGFMAAN AIL++           HV+DFDIGQG QY++LLHAL+   N
Sbjct: 318 QLLYELSPCFKLGFMAANLAILQSTVDQPNSGTGFHVIDFDIGQGCQYLNLLHALSERLN 377

Query: 50  GITRTLKITAICD 12
           G   T+KITA+ D
Sbjct: 378 GKPATVKITAVAD 390


>emb|CAX11683.1| scarecrow-like transcription factor SCL8-L protein [Antirrhinum
           majus]
          Length = 597

 Score =  135 bits (339), Expect = 5e-30
 Identities = 74/138 (53%), Positives = 93/138 (67%), Gaps = 6/138 (4%)
 Frame = -1

Query: 404 GKNDVAVDALTRLTKLGNTRGTAEQRLVSYMASALTSRVNCTEYSA-FASELYAEDHAES 228
           GK DVA + LTRL ++ N  G +EQRL  YM  AL SRVN  E+    ASEL  ++H +S
Sbjct: 238 GKPDVASEILTRLAQVANVNGNSEQRLCFYMIQALKSRVNAPEFPVKAASELCGKEHEKS 297

Query: 227 VQMMYEISPCFKLGFMAANSAILEAVSGSGPQNDTLHVVDFDIGQGRQYMHLLHALAA-- 54
           +QM+Y++SPCFKLGFMAAN AILEA +  G   + +HV+DFDIGQG QY+HLLHALAA  
Sbjct: 298 IQMLYDVSPCFKLGFMAANLAILEAATEQG--FEKIHVLDFDIGQGGQYVHLLHALAARI 355

Query: 53  ---NGITRTLKITAICDY 9
                    L+IT   D+
Sbjct: 356 KGGKXSHNLLRITTFADF 373


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