BLASTX nr result

ID: Bupleurum21_contig00017930 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00017930
         (351 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN70065.1| hypothetical protein VITISV_015730 [Vitis vinifera]    59   3e-07
emb|CBI24989.3| unnamed protein product [Vitis vinifera]               58   7e-07
ref|XP_002264162.1| PREDICTED: uncharacterized protein LOC100261...    58   7e-07
dbj|BAK01287.1| predicted protein [Hordeum vulgare subsp. vulgare]     56   3e-06
dbj|BAJ87276.1| predicted protein [Hordeum vulgare subsp. vulgare]     56   3e-06

>emb|CAN70065.1| hypothetical protein VITISV_015730 [Vitis vinifera]
          Length = 1389

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 31/54 (57%), Positives = 34/54 (62%), Gaps = 2/54 (3%)
 Frame = +1

Query: 67   SSNPTVPAFGQSLVSPSP-PGFMFGSTAPQSVSPFQFGGQQNQAAPPIPS-FQA 222
            +S P V   GQ  +SPSP P FMF STA    +PFQFG QQN A P  PS FQA
Sbjct: 1300 ASTPAVSVLGQQAISPSPSPAFMFNSTASSGANPFQFGSQQNPATPQSPSPFQA 1353


>emb|CBI24989.3| unnamed protein product [Vitis vinifera]
          Length = 1196

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 28/50 (56%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
 Frame = +1

Query: 67   SSNPTVPAFGQSLVSPSP-PGFMFGSTAPQSVSPFQFGGQQNQAAPPIPS 213
            +S P V   GQ  +SPSP P FMF STA    +PFQFG QQN A P  PS
Sbjct: 1107 ASTPAVSVLGQQAISPSPSPAFMFNSTASSGANPFQFGSQQNPATPQSPS 1156


>ref|XP_002264162.1| PREDICTED: uncharacterized protein LOC100261025 [Vitis vinifera]
          Length = 1285

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 28/50 (56%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
 Frame = +1

Query: 67   SSNPTVPAFGQSLVSPSP-PGFMFGSTAPQSVSPFQFGGQQNQAAPPIPS 213
            +S P V   GQ  +SPSP P FMF STA    +PFQFG QQN A P  PS
Sbjct: 1196 ASTPAVSVLGQQAISPSPSPAFMFNSTASSGANPFQFGSQQNPATPQSPS 1245


>dbj|BAK01287.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 1419

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 34/73 (46%), Positives = 41/73 (56%), Gaps = 2/73 (2%)
 Frame = +1

Query: 1    FGQPLVPPSNPTVPVFGQPLSSSSNPTVPAFGQSLVSPSPPGFMFGSTAPQSVSPFQFGG 180
            FGQP    S+P  PVFGQP  S++    P FGQ   SP+ P  +FG+ A Q    FQFGG
Sbjct: 1320 FGQPA---SSPAAPVFGQPAGSAA---APVFGQPASSPAAP--VFGAPAAQPAGAFQFGG 1371

Query: 181  QQN--QAAPPIPS 213
            QQ   Q  P  P+
Sbjct: 1372 QQGSVQQNPSFPT 1384


>dbj|BAJ87276.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 503

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 34/73 (46%), Positives = 41/73 (56%), Gaps = 2/73 (2%)
 Frame = +1

Query: 1   FGQPLVPPSNPTVPVFGQPLSSSSNPTVPAFGQSLVSPSPPGFMFGSTAPQSVSPFQFGG 180
           FGQP    S+P  PVFGQP  S++    P FGQ   SP+ P  +FG+ A Q    FQFGG
Sbjct: 404 FGQPA---SSPAAPVFGQPAGSAA---APVFGQPASSPAAP--VFGAPAAQPAGAFQFGG 455

Query: 181 QQN--QAAPPIPS 213
           QQ   Q  P  P+
Sbjct: 456 QQGSVQQNPSFPT 468


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