BLASTX nr result

ID: Bupleurum21_contig00017922 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00017922
         (884 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI39508.3| unnamed protein product [Vitis vinifera]              251   1e-64
ref|XP_002283865.1| PREDICTED: pre-mRNA-splicing factor SF2-like...   251   1e-64
emb|CAN80749.1| hypothetical protein VITISV_040486 [Vitis vinifera]   251   1e-64
ref|XP_002523079.1| arginine/serine-rich splicing factor, putati...   243   6e-62
ref|XP_002302710.1| predicted protein [Populus trichocarpa] gi|2...   242   1e-61

>emb|CBI39508.3| unnamed protein product [Vitis vinifera]
          Length = 249

 Score =  251 bits (642), Expect = 1e-64
 Identities = 132/189 (69%), Positives = 138/189 (73%)
 Frame = -2

Query: 778 MSGRLSRTIYVGNLPGDIREREVEDLFYKYGPIMEIDLKIPPRPPGYAFVEFEEARDAED 599
           MS R SRT+YVGNLPGDIREREVEDLFYKYGPI++IDLKIPPRPPGYAFVEFE+ARDAED
Sbjct: 1   MSSRSSRTVYVGNLPGDIREREVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDARDAED 60

Query: 598 AIDGRDGYKFDGHRLRVEFAHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRVLVTGLPSS 419
           AI GRDGY FDGHRLRVE AH                             RVLVTGLP S
Sbjct: 61  AIYGRDGYNFDGHRLRVELAHGGRGQSSSVDHYSSYSSSSRGGLSRHSEYRVLVTGLPYS 120

Query: 418 ASWQDLKDHMRRAGDVCFSQXXXXXXXXXXXXXXXYTNYDDMKYAIRKLDDSLFKNQFSK 239
           ASWQDLKDHMRRAGDVCFSQ               YTNYDDMKYAIRKLDDSLFKNQFS+
Sbjct: 121 ASWQDLKDHMRRAGDVCFSQ--VFRGRGGMTGIVDYTNYDDMKYAIRKLDDSLFKNQFSR 178

Query: 238 AYIRVEEYD 212
           AYIRV EY+
Sbjct: 179 AYIRVREYE 187


>ref|XP_002283865.1| PREDICTED: pre-mRNA-splicing factor SF2-like [Vitis vinifera]
          Length = 288

 Score =  251 bits (642), Expect = 1e-64
 Identities = 132/189 (69%), Positives = 138/189 (73%)
 Frame = -2

Query: 778 MSGRLSRTIYVGNLPGDIREREVEDLFYKYGPIMEIDLKIPPRPPGYAFVEFEEARDAED 599
           MS R SRT+YVGNLPGDIREREVEDLFYKYGPI++IDLKIPPRPPGYAFVEFE+ARDAED
Sbjct: 1   MSSRSSRTVYVGNLPGDIREREVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDARDAED 60

Query: 598 AIDGRDGYKFDGHRLRVEFAHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRVLVTGLPSS 419
           AI GRDGY FDGHRLRVE AH                             RVLVTGLP S
Sbjct: 61  AIYGRDGYNFDGHRLRVELAHGGRGQSSSVDHYSSYSSSSRGGLSRHSEYRVLVTGLPYS 120

Query: 418 ASWQDLKDHMRRAGDVCFSQXXXXXXXXXXXXXXXYTNYDDMKYAIRKLDDSLFKNQFSK 239
           ASWQDLKDHMRRAGDVCFSQ               YTNYDDMKYAIRKLDDSLFKNQFS+
Sbjct: 121 ASWQDLKDHMRRAGDVCFSQ--VFRGRGGMTGIVDYTNYDDMKYAIRKLDDSLFKNQFSR 178

Query: 238 AYIRVEEYD 212
           AYIRV EY+
Sbjct: 179 AYIRVREYE 187


>emb|CAN80749.1| hypothetical protein VITISV_040486 [Vitis vinifera]
          Length = 282

 Score =  251 bits (642), Expect = 1e-64
 Identities = 132/189 (69%), Positives = 138/189 (73%)
 Frame = -2

Query: 778 MSGRLSRTIYVGNLPGDIREREVEDLFYKYGPIMEIDLKIPPRPPGYAFVEFEEARDAED 599
           MS R SRT+YVGNLPGDIREREVEDLFYKYGPI++IDLKIPPRPPGYAFVEFE+ARDAED
Sbjct: 1   MSSRSSRTVYVGNLPGDIREREVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDARDAED 60

Query: 598 AIDGRDGYKFDGHRLRVEFAHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRVLVTGLPSS 419
           AI GRDGY FDGHRLRVE AH                             RVLVTGLP S
Sbjct: 61  AIYGRDGYNFDGHRLRVELAHGGRGQSSSVDHYSSYSSSSRGGLSRHSEYRVLVTGLPYS 120

Query: 418 ASWQDLKDHMRRAGDVCFSQXXXXXXXXXXXXXXXYTNYDDMKYAIRKLDDSLFKNQFSK 239
           ASWQDLKDHMRRAGDVCFSQ               YTNYDDMKYAIRKLDDSLFKNQFS+
Sbjct: 121 ASWQDLKDHMRRAGDVCFSQ--VFRGRGGMTGIVDYTNYDDMKYAIRKLDDSLFKNQFSR 178

Query: 238 AYIRVEEYD 212
           AYIRV EY+
Sbjct: 179 AYIRVREYE 187


>ref|XP_002523079.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
           gi|223537641|gb|EEF39264.1| arginine/serine-rich
           splicing factor, putative [Ricinus communis]
          Length = 292

 Score =  243 bits (619), Expect = 6e-62
 Identities = 127/189 (67%), Positives = 136/189 (71%)
 Frame = -2

Query: 778 MSGRLSRTIYVGNLPGDIREREVEDLFYKYGPIMEIDLKIPPRPPGYAFVEFEEARDAED 599
           MS R SRT+YVGNLPGDIREREVEDLFYKYGPI  IDLKIPPRPPGYAFVEFEEARDAED
Sbjct: 1   MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60

Query: 598 AIDGRDGYKFDGHRLRVEFAHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRVLVTGLPSS 419
           AI GRDGY FDGH+LRVE AH                             RVLVTGLPSS
Sbjct: 61  AIRGRDGYDFDGHQLRVELAHGGRGHSSSDRHSSHSGGGRGRGVSRRSEYRVLVTGLPSS 120

Query: 418 ASWQDLKDHMRRAGDVCFSQXXXXXXXXXXXXXXXYTNYDDMKYAIRKLDDSLFKNQFSK 239
           ASWQDLKDHMRRAGDVCFSQ               YTNY+DMK+AI+KLDDS F+N FS+
Sbjct: 121 ASWQDLKDHMRRAGDVCFSQ--VFRDGSGTTGIVDYTNYEDMKHAIKKLDDSEFRNAFSR 178

Query: 238 AYIRVEEYD 212
           AY+RV+EYD
Sbjct: 179 AYVRVKEYD 187


>ref|XP_002302710.1| predicted protein [Populus trichocarpa] gi|222844436|gb|EEE81983.1|
           predicted protein [Populus trichocarpa]
          Length = 252

 Score =  242 bits (617), Expect = 1e-61
 Identities = 125/189 (66%), Positives = 135/189 (71%)
 Frame = -2

Query: 778 MSGRLSRTIYVGNLPGDIREREVEDLFYKYGPIMEIDLKIPPRPPGYAFVEFEEARDAED 599
           MS R SRT+YVGNLPGDIRE+EVEDLFYKYGP+  IDLKIPPRPPGYAFVEFEEARDAED
Sbjct: 1   MSSRASRTLYVGNLPGDIREKEVEDLFYKYGPVAHIDLKIPPRPPGYAFVEFEEARDAED 60

Query: 598 AIDGRDGYKFDGHRLRVEFAHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRVLVTGLPSS 419
           AI GRDGY FDGHRLRVE AH                             RV+VTGLPSS
Sbjct: 61  AIRGRDGYDFDGHRLRVELAHGGRGHSSSDRHSSYSGGRGRGGASRRSEYRVVVTGLPSS 120

Query: 418 ASWQDLKDHMRRAGDVCFSQXXXXXXXXXXXXXXXYTNYDDMKYAIRKLDDSLFKNQFSK 239
           ASWQDLKDHMRRAGDVCFSQ               YTNY+DMKYAI+K+DDS F+N FS+
Sbjct: 121 ASWQDLKDHMRRAGDVCFSQ--VFRDGSGTTGIVDYTNYEDMKYAIKKIDDSEFRNAFSQ 178

Query: 238 AYIRVEEYD 212
           AY+RV EYD
Sbjct: 179 AYVRVREYD 187


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