BLASTX nr result

ID: Bupleurum21_contig00017897 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00017897
         (1460 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517116.1| conserved hypothetical protein [Ricinus comm...   266   1e-68
ref|XP_002282784.1| PREDICTED: uncharacterized protein LOC100245...   263   9e-68
ref|XP_004139816.1| PREDICTED: uncharacterized protein LOC101210...   231   5e-58
ref|XP_003556054.1| PREDICTED: uncharacterized protein LOC100807...   213   1e-52
ref|XP_003632307.1| PREDICTED: uncharacterized protein LOC100855...   209   1e-51

>ref|XP_002517116.1| conserved hypothetical protein [Ricinus communis]
            gi|223543751|gb|EEF45279.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 319

 Score =  266 bits (680), Expect = 1e-68
 Identities = 165/333 (49%), Positives = 208/333 (62%), Gaps = 13/333 (3%)
 Frame = -2

Query: 1234 LLVRKLRVSRS*QVEMADNGSLSSPNTPIDRYRTXXXXXXXSPRLFNGFASKGHTDT-ES 1058
            ++ ++ RVS S QV MAD  S+ SP    ++YR         PRLF GF+ K  ++T ES
Sbjct: 1    MIRKRSRVSSSKQVLMADYSSILSPT---EKYRKPTSF----PRLFTGFSFKNFSETTES 53

Query: 1057 MMSPTSVLDSKPSSGLKSPFWSDGHSKSPKISKPDSRIHWDXXXXXXXXXXXVDAL-IDE 881
            +MSPTS+LDSKP SG ++PF  D  + +PK  + D++  WD           VDAL  D+
Sbjct: 54   VMSPTSILDSKPFSGFRNPFLPD-QNLTPKTQESDTKRTWDKLDSKGIGLAIVDALNYDD 112

Query: 880  TSDPNLSKTESRMVLFGSQLKIQIPTMP-PPSVLSPNSASPGDFGIKTRNSQLGSLSP-- 710
             +D NLSK ESRMVLFGSQLKIQ+P +P  P+  SP S  P DFGIKTR+SQLGS S   
Sbjct: 113  KTDSNLSKPESRMVLFGSQLKIQVPPLPVSPTDQSPKS--PADFGIKTRHSQLGSSSSGL 170

Query: 709  ------LSVTCSSNKSPFXXXXXXXXXXXXXXXXXXXXXXXXEYTCVITHGPNPKTTHIF 548
                   SV  S+N S                          +YTCVI++GPNPKTTHIF
Sbjct: 171  SHSPVKKSVCGSANSS---IDTSSSPGVFNGSLSAIEMEQSEDYTCVISYGPNPKTTHIF 227

Query: 547  DDCIIESCCGIVGLSASLKKENRFSTAKSLRYPSESFLNYCYNCKKNLGQGKDIYMYRGD 368
            DD I+ESCC +V  S S  + N F    S  YPS++FL++CY CKKNLGQGKDIYMYRG+
Sbjct: 228  DDYIVESCCDVVEFSTSRTQTNGFLGDGS-SYPSDNFLSFCYACKKNLGQGKDIYMYRGE 286

Query: 367  KAFCSSECRYKEILLDEGIEKSD--EFYGT*TQ 275
            KAFCSSECRY+E+L +EGI+K D  + YGT +Q
Sbjct: 287  KAFCSSECRYQEMLSEEGIDKLDHEDGYGTCSQ 319


>ref|XP_002282784.1| PREDICTED: uncharacterized protein LOC100245904 [Vitis vinifera]
          Length = 307

 Score =  263 bits (672), Expect = 9e-68
 Identities = 161/327 (49%), Positives = 199/327 (60%), Gaps = 10/327 (3%)
 Frame = -2

Query: 1234 LLVRKLRVSRS*QVEMADNGSLSSPNTPIDRYRTXXXXXXXS-PRLFNGFASKGHTDTES 1058
            +L ++ R S S Q  MAD GSL SP    D+YR        S PRLF GF+SK  ++TE+
Sbjct: 1    MLRKRSRASTSKQALMADCGSLPSPT---DKYRRPPSSSFFSSPRLFTGFSSKVFSETET 57

Query: 1057 MMSPTSVLDSKPSSGLKSPFWSDGHSKSPKISKPDSRIHWDXXXXXXXXXXXVDALIDET 878
            MMSPTS+LDSKP SG ++PF +   +  P  S+P+ R HWD           VDAL  + 
Sbjct: 58   MMSPTSILDSKPFSGFRNPFTNTTSTIKP--SEPEPRRHWDKLDSRMIGLGIVDALTHDE 115

Query: 877  SDPNLSKTESRMVLFGSQLKIQIPTMPPPSVLSP--NSASPGDFGIKTRNSQLGSLSPLS 704
            SDP LSK ESRMVLFGSQLKIQIP + P SVLSP  +  SP DFGIKTRNSQLG  SP  
Sbjct: 116  SDPKLSKPESRMVLFGSQLKIQIPPL-PSSVLSPAESPKSPADFGIKTRNSQLGPFSPCL 174

Query: 703  VTCSSNKSPF-----XXXXXXXXXXXXXXXXXXXXXXXXEYTCVITHGPNPKTTHIFDDC 539
                + KS F                             +YTCVI+HGPNP+TTHIFD+C
Sbjct: 175  SQSPAKKSGFGSANSGLEAPNSPRIFTGCLSATEMELSEDYTCVISHGPNPRTTHIFDNC 234

Query: 538  IIESCCGIVGLSASLKKENRFSTAKSLRYPSESFLNYCYNCKKNLGQGKDIYMYRGDKAF 359
                   IVG SAS K+ + F          ESFLN+C++C+KN+GQGKDIY+YRG+KAF
Sbjct: 235  -------IVGFSASRKENDVF---------PESFLNFCHSCRKNIGQGKDIYIYRGEKAF 278

Query: 358  CSSECRYKEILLDEGIE--KSDEFYGT 284
            CSSECR +EI+L+E +E  +  + YGT
Sbjct: 279  CSSECRQREIMLEERMEILEGGDVYGT 305


>ref|XP_004139816.1| PREDICTED: uncharacterized protein LOC101210425 [Cucumis sativus]
            gi|449492592|ref|XP_004159042.1| PREDICTED:
            uncharacterized LOC101210425 [Cucumis sativus]
          Length = 294

 Score =  231 bits (588), Expect = 5e-58
 Identities = 134/290 (46%), Positives = 173/290 (59%), Gaps = 6/290 (2%)
 Frame = -2

Query: 1156 TPIDRYRTXXXXXXXSPRLFNGFASKGHTDTESMMSPTSVLDSKPSSGLKSPFWSDGHSK 977
            +P    R        SPRLF   +SKG ++TE++MSPTS+L+  P  GL++ FW  G S 
Sbjct: 15   SPTSNSRKLSSSFFGSPRLFTSSSSKGLSETEAVMSPTSILE--PFLGLRNSFW--GESN 70

Query: 976  SPKISKPDSRIHWDXXXXXXXXXXXVDALIDETSDPNLSKTESRMVLFGSQLKIQIPTMP 797
            SP+    +S+  WD            D L +E SDP  SK ++RMV+ GSQLKIQIP +P
Sbjct: 71   SPRTQLTESKRPWDSKGIGLAIV---DGLTEENSDPKPSKPDTRMVVLGSQLKIQIPPLP 127

Query: 796  P-PSVLSPNSASPGDFGIKTRNSQLGSLSPLSVTCSSNKSPFXXXXXXXXXXXXXXXXXX 620
            P  S    +  SP +FGIKTRNS LGSLSP+S    + KS F                  
Sbjct: 128  PFVSPTDDSPVSPIEFGIKTRNSHLGSLSPVSSLSPAKKSAFGSSSSGQETPNSPLVFTG 187

Query: 619  XXXXXXE-----YTCVITHGPNPKTTHIFDDCIIESCCGIVGLSASLKKENRFSTAKSLR 455
                        YTCVI+HGPNPKTTHIF DC+IES CG+    + ++KEN F   ++  
Sbjct: 188  CLSAGEIEQSEDYTCVISHGPNPKTTHIFGDCVIESGCGVY---SPVRKENGFFRDRTSF 244

Query: 454  YPSESFLNYCYNCKKNLGQGKDIYMYRGDKAFCSSECRYKEILLDEGIEK 305
             P E+FL++C NCKKNL QGKDIYMYRG+KAFCS ECRY+E++L+E  E+
Sbjct: 245  SP-ENFLSFCNNCKKNLEQGKDIYMYRGEKAFCSDECRYQEMMLEEEEEE 293


>ref|XP_003556054.1| PREDICTED: uncharacterized protein LOC100807906 [Glycine max]
          Length = 269

 Score =  213 bits (541), Expect = 1e-52
 Identities = 130/282 (46%), Positives = 167/282 (59%), Gaps = 8/282 (2%)
 Frame = -2

Query: 1108 PRLFNGFASKGHTDTESMMSPTSVLDSKPSSGLKSPFWSDGHSKSPKISKPDSRIHWDXX 929
            PRLF  F  KG  +TE+MMSPTS LDSKP SG K+PFWS+  + SP+    + + +WD  
Sbjct: 20   PRLFTNFTPKGFHETETMMSPTSTLDSKPFSGFKNPFWSE--TNSPRTPVSEHKRYWDKL 77

Query: 928  XXXXXXXXXVDALIDETSDPNLS-KTESRMVLFGSQLKIQIPTMPPPSVLSPNSASPGDF 752
                     VDAL+DE     +S K+ESRMV+FGSQLKIQIP + P S  S   A  G+ 
Sbjct: 78   DSKGIGLGLVDALVDEEKHGEVSSKSESRMVVFGSQLKIQIPPLSP-SESSKFVAEKGNS 136

Query: 751  --GIKTRNSQ---LGSLSPLSVTCSSNKSPFXXXXXXXXXXXXXXXXXXXXXXXXEYTCV 587
              G+   NSQ   +G LS   +  S +                             YT V
Sbjct: 137  SSGVADANSQRVFMGCLSASEMELSED-----------------------------YTRV 167

Query: 586  ITHGPNPKTTHIFDDCIIESCCGIVGLSASLKKENRFSTAKSLRYPSESFLNYCYNCKKN 407
            I+ GPNP+TTHIFD+CIIES C  +G SAS  KEN     ++  Y S SFL+ C++CKKN
Sbjct: 168  ISRGPNPRTTHIFDNCIIESSCFELGCSASSVKENGCFLDQT-SYHSRSFLSVCFHCKKN 226

Query: 406  LGQGKDIYMYRGDKAFCSSECRYKEILLDEGIEK--SDEFYG 287
            LGQGKDIYMYRG++AFCS+ECRY+ +LL+E + K  + + YG
Sbjct: 227  LGQGKDIYMYRGERAFCSNECRYQGMLLEEEMSKLEASDIYG 268


>ref|XP_003632307.1| PREDICTED: uncharacterized protein LOC100855273 [Vitis vinifera]
            gi|296085215|emb|CBI28710.3| unnamed protein product
            [Vitis vinifera]
          Length = 293

 Score =  209 bits (532), Expect = 1e-51
 Identities = 134/314 (42%), Positives = 176/314 (56%), Gaps = 8/314 (2%)
 Frame = -2

Query: 1234 LLVRKLRVSRS*QVEMADNGSLSSPNTPIDRYRTXXXXXXXSPRLFNGFASKGHTDTESM 1055
            +L  + R   S Q  M D+ SL SP   + +          SP++F GF SK   + E +
Sbjct: 1    MLRNRSRAVASKQAIMGDHSSLPSPTENLTK---PISFLLGSPKIFRGFISKCLPEAEDI 57

Query: 1054 MSPTSVLDSKPSSGLKSPFWSDGHSKSPKISKPDSRIHWDXXXXXXXXXXXVDA--LIDE 881
            +SPTS+ D+KP SG  +PF  +    SP       R  W+           +D+  +  E
Sbjct: 58   ISPTSIFDTKPFSG--NPFEYEKTQASPGTFSETKR-SWENLDSIGIGVALIDSDPINGE 114

Query: 880  TSDPNLSKTESRMVLFGSQLKIQIPTMPPPSVLSPNSA--SPGDFGIKTRNSQLGSLSP- 710
             ++ N SK  SRMVLFGSQLK+QIP + P S LSP  +  SP DFGIKTRNSQL SLSP 
Sbjct: 115  GANENFSKPNSRMVLFGSQLKVQIPHLQP-SALSPAESPKSPADFGIKTRNSQLASLSPF 173

Query: 709  --LSVTCSSNKSPFXXXXXXXXXXXXXXXXXXXXXXXXEYTCVITHGPNPKTTHIFDDCI 536
              L+    +  SP                         EYTCVI+HGPNP+TTHIFD+CI
Sbjct: 174  GSLNSGIQTKDSP---------------RIFTGMELSEEYTCVISHGPNPRTTHIFDNCI 218

Query: 535  IESCCGIVGLSASLKKENRFST-AKSLRYPSESFLNYCYNCKKNLGQGKDIYMYRGDKAF 359
            +ESCCG+  LS     +N + T  ++   P E+FL+ C+ CKKNL Q +DIY+YRG+KAF
Sbjct: 219  VESCCGVSALS-----QNNYCTFPENPNSPPENFLSCCHTCKKNLSQERDIYIYRGEKAF 273

Query: 358  CSSECRYKEILLDE 317
            CS ECR +E+L DE
Sbjct: 274  CSHECRSQEMLFDE 287


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