BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00017878
         (506 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004149638.1| PREDICTED: E3 ubiquitin-protein ligase RING1...    88   8e-16
ref|XP_002864451.1| zinc finger family protein [Arabidopsis lyra...    87   1e-15
ref|XP_002862493.1| hypothetical protein ARALYDRAFT_359584 [Arab...    87   1e-15
ref|NP_200445.1| RING/U-box domain-containing protein [Arabidops...    87   1e-15
ref|XP_002867566.1| zinc finger family protein [Arabidopsis lyra...    86   4e-15

>ref|XP_004149638.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis sativus]
           gi|449519040|ref|XP_004166543.1| PREDICTED: E3
           ubiquitin-protein ligase RING1-like [Cucumis sativus]
          Length = 362

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 46/91 (50%), Positives = 55/91 (60%), Gaps = 3/91 (3%)
 Frame = +2

Query: 176 STGYWCHMCNQMVDPIMEVECIKCPFCQGGFVEEIXXXXXXXXXXXXXXXXXDVE---SL 346
           +T YWCHMC+QMV+PI++VE IKCPFC+ GFVEEI                 + E     
Sbjct: 6   ATRYWCHMCSQMVNPIVDVE-IKCPFCRSGFVEEIGNGISSDNNDNNNNNNNNNELESDF 64

Query: 347 DSDRSLSLWAPILLGMMSNPXXXXXXXXLEF 439
            S+R+LSLWAPILLGMM NP        LEF
Sbjct: 65  GSERALSLWAPILLGMMGNPRGRRRFRHLEF 95


>ref|XP_002864451.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297310286|gb|EFH40710.1| zinc finger family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 395

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 43/85 (50%), Positives = 50/85 (58%)
 Frame = +2

Query: 185 YWCHMCNQMVDPIMEVECIKCPFCQGGFVEEIXXXXXXXXXXXXXXXXXDVESLDSDRSL 364
           YWCHMC+QMV+PIME E IKCPFCQ GF+EE+                       +DR+L
Sbjct: 9   YWCHMCSQMVNPIMESE-IKCPFCQSGFIEEMSGNSGGGGGRGIRDVQDSETDFGTDRAL 67

Query: 365 SLWAPILLGMMSNPXXXXXXXXLEF 439
           SLWAPILLGMMS+P         EF
Sbjct: 68  SLWAPILLGMMSSPRRRRRFRRSEF 92


>ref|XP_002862493.1| hypothetical protein ARALYDRAFT_359584 [Arabidopsis lyrata subsp.
           lyrata] gi|297308041|gb|EFH38751.1| hypothetical protein
           ARALYDRAFT_359584 [Arabidopsis lyrata subsp. lyrata]
          Length = 216

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 43/85 (50%), Positives = 50/85 (58%)
 Frame = +2

Query: 185 YWCHMCNQMVDPIMEVECIKCPFCQGGFVEEIXXXXXXXXXXXXXXXXXDVESLDSDRSL 364
           YWCHMC+QMV+PIME E IKCPFCQ GF+EE+                       +DR+L
Sbjct: 5   YWCHMCSQMVNPIMESE-IKCPFCQSGFIEEMSGNSGGGGGRGIRDVQDSETDFGTDRAL 63

Query: 365 SLWAPILLGMMSNPXXXXXXXXLEF 439
           SLWAPILLGMMS+P         EF
Sbjct: 64  SLWAPILLGMMSSPRRRRRFRRSEF 88


>ref|NP_200445.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
           gi|10177832|dbj|BAB11261.1| unnamed protein product
           [Arabidopsis thaliana] gi|17380898|gb|AAL36261.1|
           unknown protein [Arabidopsis thaliana]
           gi|20259581|gb|AAM14133.1| unknown protein [Arabidopsis
           thaliana] gi|332009368|gb|AED96751.1| RING/U-box
           domain-containing protein [Arabidopsis thaliana]
          Length = 396

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 42/85 (49%), Positives = 50/85 (58%)
 Frame = +2

Query: 185 YWCHMCNQMVDPIMEVECIKCPFCQGGFVEEIXXXXXXXXXXXXXXXXXDVESLDSDRSL 364
           YWCHMC+QMV+P+ME E IKCPFCQ GF+EE+                       +DR+L
Sbjct: 9   YWCHMCSQMVNPVMESE-IKCPFCQSGFIEEMSGNGGGGGGRGIRDVQDSETDFGTDRAL 67

Query: 365 SLWAPILLGMMSNPXXXXXXXXLEF 439
           SLWAPILLGMMS+P         EF
Sbjct: 68  SLWAPILLGMMSSPRRRRRFRRSEF 92


>ref|XP_002867566.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297313402|gb|EFH43825.1| zinc finger family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 357

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 42/85 (49%), Positives = 49/85 (57%)
 Frame = +2

Query: 185 YWCHMCNQMVDPIMEVECIKCPFCQGGFVEEIXXXXXXXXXXXXXXXXXDVESLDSDRSL 364
           YWCHMC+QMV+PI++ E IKCPFCQ GFVEE+                       +DR+L
Sbjct: 5   YWCHMCSQMVNPIIDAE-IKCPFCQSGFVEEMSREINGGSSSSLREVQDPEIDFGTDRAL 63

Query: 365 SLWAPILLGMMSNPXXXXXXXXLEF 439
           SLW PILLGMMSNP         EF
Sbjct: 64  SLWGPILLGMMSNPRRRRRFRRTEF 88